Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
1b09cc91 by Andreas Tille at 2022-01-07T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,57 +1,53 @@
-Last-Update: Fri, 07 Jan 2022 01:42:04 +0000
+Last-Update: Fri, 07 Jan 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 178 | {imaging,covid-19} |
- orthanc | 104 | {covid-19,imaging,practice} |
- orthanc-wsi | 51 | {oncology,laboratory,practice,his,covid-19,imaging} |
+ dcmtk | 181 | {imaging,covid-19} |
+ orthanc | 105 | {covid-19,imaging,practice} |
+ orthanc-wsi | 53 | {oncology,laboratory,practice,his,covid-19,imaging} |
htsjdk | 31 | {bio-dev} |
dicom3tools | 28 | {imaging} |
dicomscope | 26 | {imaging} |
- amide | 23 | {imaging} |
+ amide | 25 | {imaging} |
dcm2niix | 23 | {imaging} |
gdcm | 16 | {covid-19,imaging} |
- orthanc-webviewer | 16 | {imaging} |
gnumed-server | 15 | {covid-19,practice} |
minc-tools | 15 | {imaging} |
+ orthanc-webviewer | 15 | {imaging} |
invesalius | 14 | {imaging} |
+ ngs-sdk | 14 | {bio-dev} |
openslide | 14 | {imaging} |
- adun.app | 13 | {bio} |
- ngs-sdk | 13 | {bio-dev} |
+ adun.app | 12 | {bio} |
dicomnifti | 12 | {imaging} |
gdcm | 12 | {imaging-dev} |
- insighttoolkit4 | 12 | {imaging-dev} |
pixelmed | 12 | {imaging} |
+ insighttoolkit4 | 11 | {imaging-dev} |
libminc | 9 | {imaging-dev} |
mia | 9 | {imaging} |
nifticlib | 9 | {imaging} |
plastimatch | 9 | {imaging} |
- biojava-live | 8 | {bio-dev} |
mrtrix3 | 8 | {imaging} |
ngs-sdk | 8 | {bio-dev} |
nifticlib | 8 | {imaging-dev} |
- jebl2 | 7 | {bio-dev} |
+ biojava-live | 7 | {bio-dev} |
king | 7 | {typesetting,imaging} |
+ lagan | 7 | {bio} |
ngs-sdk | 7 | {bio-dev} |
nifti2dicom | 7 | {imaging} |
openslide | 7 | {imaging-dev} |
- lagan | 6 | {bio} |
+ orthanc-dicomweb | 7 | {imaging,covid-19} |
+ jebl2 | 6 | {bio-dev} |
librg-utils-perl | 6 | {bio} |
nifti2dicom | 6 | {imaging} |
nipype | 6 | {imaging,imaging-dev} |
- orthanc-dicomweb | 6 | {imaging,covid-19} |
orthanc-postgresql | 6 | {imaging} |
salmon | 6 | {covid-19,bio} |
libdivsufsort | 5 | {bio-dev} |
obitools | 5 | {bio} |
beast-mcmc | 4 | {bio-phylogeny,bio} |
bio-tradis | 4 | {bio-dev,bio} |
- bitseq | 4 | {bio} |
- brig | 4 | {bio} |
dicompyler | 4 | {oncology} |
elastix | 4 | {imaging} |
- embassy-domainatrix | 4 | {bio,cloud} |
- embassy-domalign | 4 | {cloud,bio} |
melting | 4 | {bio,cloud} |
oscar | 4 | {data,tools,practice} |
pymia | 4 | {imaging-dev} |
@@ -61,23 +57,21 @@ Last-Update: Fri, 07 Jan 2022 01:42:04 +0000
arden | 3 | {cloud,bio} |
assemblytics | 3 | {bio} |
bart-view | 3 | {imaging} |
- canu | 3 | {bio} |
+ bitseq | 3 | {bio} |
+ brig | 3 | {bio} |
cat-bat | 3 | {bio,covid-19} |
clonalorigin | 3 | {bio} |
- embassy-domsearch | 3 | {bio,cloud} |
+ embassy-domainatrix | 3 | {bio,cloud} |
+ embassy-domalign | 3 | {cloud,bio} |
fastml | 3 | {bio} |
- gatb-core | 3 | {bio} |
ghmm | 3 | {bio} |
jellyfish1 | 3 | {bio} |
lamarc | 3 | {bio} |
libncl | 3 | {bio} |
- librdp-taxonomy-tree-java | 3 | {bio-dev} |
- mhap | 3 | {bio,bio-ngs} |
orthanc-python | 3 | {covid-19} |
pigx-rnaseq | 3 | {bio,covid-19} |
piler | 3 | {bio} |
pscan-chip | 3 | {bio} |
- rdp-classifier | 3 | {bio} |
runcircos-gui | 3 | {bio} |
saint | 3 | {bio} |
sibsim4 | 3 | {bio,cloud} |
@@ -89,11 +83,14 @@ Last-Update: Fri, 07 Jan 2022 01:42:04 +0000
atropos | 2 | {bio} |
biomaj3-cli | 2 | {cloud} |
blimps | 2 | {bio} |
+ canu | 2 | {bio} |
clonalframeml | 2 | {covid-19,bio} |
cmtk | 2 | {imaging} |
delly | 2 | {bio,covid-19} |
dextractor | 2 | {covid-19,bio} |
+ embassy-domsearch | 2 | {bio,cloud} |
emmax | 2 | {bio} |
+ gatb-core | 2 | {bio} |
getdata | 2 | {bio} |
hinge | 2 | {bio} |
ipig | 2 | {bio} |
@@ -101,7 +98,9 @@ Last-Update: Fri, 07 Jan 2022 01:42:04 +0000
kmerresistance | 2 | {bio} |
libbio-mage-utils-perl | 2 | {bio-dev} |
libpal-java | 2 | {bio-dev} |
+ librdp-taxonomy-tree-java | 2 | {bio-dev} |
mauve-aligner | 2 | {bio} |
+ mhap | 2 | {bio,bio-ngs} |
orthanc-gdcm | 2 | {imaging} |
orthanc-mysql | 2 | {imaging} |
papyrus | 2 | {imaging-dev} |
@@ -114,6 +113,7 @@ Last-Update: Fri, 07 Jan 2022 01:42:04 +0000
qcumber | 2 | {bio} |
rambo-k | 2 | {bio} |
rdp-alignment | 2 | {bio} |
+ rdp-classifier | 2 | {bio} |
rtax | 2 | {cloud,bio} |
sga | 2 | {bio} |
sift | 2 | {bio} |
@@ -130,7 +130,6 @@ Last-Update: Fri, 07 Jan 2022 01:42:04 +0000
varna | 2 | {bio} |
ctn | 1 | {imaging-dev} |
cufflinks | 1 | {bio,cloud} |
- emboss-explorer | 1 | {bio} |
libctapimkt | 1 | {practice} |
libsbml | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
@@ -148,6 +147,7 @@ Last-Update: Fri, 07 Jan 2022 01:42:04 +0000
camp | 0 | {imaging-dev} |
cutesv | 0 | {bio} |
eegdev | 0 | {imaging-dev} |
+ emboss-explorer | 0 | {bio} |
emperor | 0 | {bio} |
fis-gtm | 0 | {his} |
gatb-core | 0 | {bio-dev} |
@@ -192,8 +192,8 @@ Last-Update: Fri, 07 Jan 2022 01:42:04 +0000
parallel-fastq-dump | 0 | {covid-19} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {bio-dev,covid-19} |
+ python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1b09cc916b481dd3ff0129dce1fd52cca98345d7
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1b09cc916b481dd3ff0129dce1fd52cca98345d7
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