Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
f6cd2f6c by Andreas Tille at 2022-01-10T13:42:25+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,72 +1,74 @@
-Last-Update: Mon, 10 Jan 2022 01:42:11 +0000
+Last-Update: Mon, 10 Jan 2022 13:42:10 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 182 | {imaging,covid-19} |
orthanc | 104 | {covid-19,imaging,practice} |
- orthanc-wsi | 53 | {oncology,laboratory,practice,his,covid-19,imaging} |
- dicom3tools | 28 | {imaging} |
+ orthanc-wsi | 52 | {oncology,laboratory,practice,his,covid-19,imaging} |
htsjdk | 28 | {bio-dev} |
+ dicom3tools | 27 | {imaging} |
dicomscope | 26 | {imaging} |
- amide | 24 | {imaging} |
- dcm2niix | 19 | {imaging} |
+ amide | 25 | {imaging} |
+ dcm2niix | 17 | {imaging} |
orthanc-webviewer | 16 | {imaging} |
gdcm | 15 | {covid-19,imaging} |
- minc-tools | 15 | {imaging} |
gnumed-server | 14 | {covid-19,practice} |
- invesalius | 14 | {imaging} |
- ngs-sdk | 13 | {bio-dev} |
- openslide | 13 | {imaging} |
+ minc-tools | 14 | {imaging} |
+ invesalius | 13 | {imaging} |
gdcm | 12 | {imaging-dev} |
- pixelmed | 12 | {imaging} |
+ ngs-sdk | 12 | {bio-dev} |
adun.app | 11 | {bio} |
- dicomnifti | 11 | {imaging} |
- insighttoolkit4 | 10 | {imaging-dev} |
- libminc | 9 | {imaging-dev} |
+ insighttoolkit4 | 11 | {imaging-dev} |
+ openslide | 11 | {imaging} |
+ pixelmed | 11 | {imaging} |
+ dicomnifti | 10 | {imaging} |
+ libminc | 10 | {imaging-dev} |
mia | 9 | {imaging} |
- nifticlib | 9 | {imaging} |
- plastimatch | 9 | {imaging} |
+ nifticlib | 9 | {imaging-dev} |
+ biojava-live | 8 | {bio-dev} |
ngs-sdk | 8 | {bio-dev} |
nifti2dicom | 8 | {imaging} |
- nifticlib | 8 | {imaging-dev} |
+ nifticlib | 8 | {imaging} |
orthanc-dicomweb | 8 | {imaging,covid-19} |
- biojava-live | 7 | {bio-dev} |
- king | 7 | {typesetting,imaging} |
+ plastimatch | 8 | {imaging} |
lagan | 7 | {bio} |
mrtrix3 | 7 | {imaging} |
nifti2dicom | 7 | {imaging} |
openslide | 7 | {imaging-dev} |
orthanc-postgresql | 7 | {imaging} |
+ king | 6 | {typesetting,imaging} |
librg-utils-perl | 6 | {bio} |
- ngs-sdk | 6 | {bio-dev} |
nipype | 6 | {imaging,imaging-dev} |
- salmon | 6 | {covid-19,bio} |
libdivsufsort | 5 | {bio-dev} |
+ ngs-sdk | 5 | {bio-dev} |
obitools | 5 | {bio} |
+ salmon | 5 | {covid-19,bio} |
+ arden | 4 | {cloud,bio} |
+ bart-view | 4 | {imaging} |
beast-mcmc | 4 | {bio-phylogeny,bio} |
bio-tradis | 4 | {bio-dev,bio} |
dicompyler | 4 | {oncology} |
elastix | 4 | {imaging} |
+ embassy-domalign | 4 | {cloud,bio} |
jebl2 | 4 | {bio-dev} |
+ libncl | 4 | {bio} |
melting | 4 | {bio,cloud} |
orthanc-mysql | 4 | {imaging} |
pymia | 4 | {imaging-dev} |
+ staden | 4 | {bio} |
+ tracetuner | 4 | {bio} |
treeview | 4 | {bio,bio-phylogeny} |
anfo | 3 | {bio,cloud} |
- arden | 3 | {cloud,bio} |
assemblytics | 3 | {bio} |
- bart-view | 3 | {imaging} |
bitseq | 3 | {bio} |
brig | 3 | {bio} |
cat-bat | 3 | {bio,covid-19} |
clonalorigin | 3 | {bio} |
embassy-domainatrix | 3 | {bio,cloud} |
- embassy-domalign | 3 | {cloud,bio} |
fastml | 3 | {bio} |
ghmm | 3 | {bio} |
jellyfish1 | 3 | {bio} |
lamarc | 3 | {bio} |
- libncl | 3 | {bio} |
orthanc-python | 3 | {covid-19} |
oscar | 3 | {data,tools,practice} |
pigx-rnaseq | 3 | {bio,covid-19} |
@@ -77,8 +79,7 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000
sibsim4 | 3 | {bio,cloud} |
spread-phy | 3 | {bio,bio-phylogeny} |
stacks | 3 | {bio} |
- staden | 3 | {bio} |
- tracetuner | 3 | {bio} |
+ thesias | 3 | {covid-19,bio} |
tvc | 3 | {bio} |
zalign | 3 | {bio,cloud} |
atropos | 2 | {bio} |
@@ -121,7 +122,6 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000
sprai | 2 | {bio} |
suitename | 2 | {bio} |
surankco | 2 | {bio} |
- thesias | 2 | {covid-19,bio} |
tophat-recondition | 2 | {covid-19,bio} |
trace2dbest | 2 | {bio} |
varna | 2 | {bio} |
@@ -139,6 +139,7 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000
shovill | 1 | {covid-19,bio} |
sift | 1 | {bio} |
varscan | 1 | {bio,covid-19} |
+ vienna-rna | 1 | {covid-19,bio} |
acedb | 0 | {bio,cloud} |
bambamc | 0 | {bio-dev} |
biojava4-live | 0 | {bio-dev} |
@@ -192,8 +193,8 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000
parallel-fastq-dump | 0 | {covid-19} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {bio-dev,covid-19} |
+ python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
@@ -201,7 +202,6 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
- vienna-rna | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
mssstest | -1 | {tools} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f6cd2f6c288e2485ea6e29fddbfa5599fe41ca4f
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f6cd2f6c288e2485ea6e29fddbfa5599fe41ca4f
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