[med-svn] [Git][med-team/megan-ce][master] 2 commits: Installing icons, converting them with imagemagick

Pierre Gruet (@pgt) gitlab at salsa.debian.org
Fri Jan 14 19:58:46 GMT 2022



Pierre Gruet pushed to branch master at Debian Med / megan-ce


Commits:
0ebaa14b by Pierre Gruet at 2022-01-14T20:57:50+01:00
Installing icons, converting them with imagemagick

- - - - -
642c6954 by Pierre Gruet at 2022-01-14T20:58:33+01:00
Providing .desktop and metainfo files

- - - - -


6 changed files:

- debian/control
- debian/copyright
- + debian/desktop/megan.desktop
- debian/megan-ce.install
- + debian/metainfo/io.github.danielhuson.megan_community_edition.metainfo.xml
- debian/rules


Changes:

=====================================
debian/control
=====================================
@@ -8,6 +8,7 @@ Build-Depends: debhelper-compat (= 13),
                javahelper,
                default-jdk,
                ant,
+               imagemagick,
                libjloda-java,
                libcolt-free-java,
                libcommons-math3-java,


=====================================
debian/copyright
=====================================
@@ -14,6 +14,10 @@ Copyright: 2016 Andreas Tille <tille at debian.org>
            2021 Pierre Gruet <pgt at debian.org>
 License: GPL-3+
 
+Files: debian/metainfo/io.github.danielhuson.megan_community_edition.metainfo.xml
+Copyright: 2022 Pierre Gruet <pgt at debian.org>
+License: CC-BY-4.0
+
 License: GPL-3+
  This program is free software; you can redistribute it and/or modify
  it under the terms of the GNU General Public License as published by
@@ -27,3 +31,314 @@ License: GPL-3+
  .
  On a Debian system the GNU GPL license version 3 is distributed in
  /usr/share/common-licenses/GPL-3.
+
+License: CC-BY-4.0
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=====================================
debian/desktop/megan.desktop
=====================================
@@ -0,0 +1,11 @@
+[Desktop Entry]
+Comment=MEGAN Community Edition
+Exec=megan
+Icon=megan
+Name[en_US]=Megan Community Edition
+Name=Megan Community Edition
+Categories=Science;Biology;DataVisualization;
+StartupNotify=false
+Terminal=false
+Type=Application
+Keywords=genomics


=====================================
debian/megan-ce.install
=====================================
@@ -1 +1,3 @@
 debian/bin/megan usr/bin
+debian/desktop/*.desktop usr/share/applications/
+debian/metainfo/*.xml usr/share/metainfo


=====================================
debian/metainfo/io.github.danielhuson.megan_community_edition.metainfo.xml
=====================================
@@ -0,0 +1,23 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<component type="desktop-application">
+  <id>io.github.danielhuson.megan_community_edition</id>
+  
+  <name>megan</name>
+  <summary>Interactive exploration and analysis of large-scale microbiome sequencing data</summary>
+  
+  <metadata_license>CC-BY-4.0</metadata_license>
+  <project_license>GPL-3.0-or-later</project_license>
+  
+  <description>
+    <p>
+      Megan-ce is a shotgun sequencer to analyze microbiome samples. It is a rewritte and extension of the widely-used microbiome analysis tool MEGAN so as to facilitate the interactive analysis of the taxonomic and functional content of very large microbiome datasets. Other new features include a functional classifier called InterPro2GO, gene-centric read assembly, principal coordinate analysis of taxonomy and function, and support for metadata.
+    </p>
+    <p>
+      By integrating MEGAN CE with the high-throughput DNA-to-protein alignment tool DIAMOND a powerful and complete pipeline for the analysis of metagenome shotgun sequences can be provided.
+    </p>
+  </description>
+  
+  <launchable type="desktop-id">megan.desktop</launchable>
+
+  <content_rating type="oars-1.0" />
+</component>


=====================================
debian/rules
=====================================
@@ -2,6 +2,8 @@
 
 # DH_VERBOSE := 1
 
+include /usr/share/dpkg/default.mk
+
 export LC_ALL=C.UTF-8
 
 %:
@@ -13,3 +15,11 @@ override_dh_clean:
 
 override_dh_auto_build:
 	ant -buildfile antbuild/build.xml jar
+
+override_dh_auto_install:
+	dh_auto_install
+	# Converting provided gif icons to png and installing them
+	for size in 32 48 64; do \
+	        mkdir -p debian/$(DEB_SOURCE)/usr/share/icons/hicolor/$${size}x$${size}/apps/; \
+	        convert src/megan/resources/icons/megan$$size.gif debian/$(DEB_SOURCE)/usr/share/icons/hicolor/$${size}x$${size}/apps/megan.png; \
+	done



View it on GitLab: https://salsa.debian.org/med-team/megan-ce/-/compare/def5c3e38fed499579d0d051f5c6897af95ee35a...642c6954301903c007cecf1636d37cfbc7f278a4

-- 
View it on GitLab: https://salsa.debian.org/med-team/megan-ce/-/compare/def5c3e38fed499579d0d051f5c6897af95ee35a...642c6954301903c007cecf1636d37cfbc7f278a4
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