Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
0497e3c5 by Andreas Tille at 2022-01-15T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,87 +1,87 @@
-Last-Update: Sat, 15 Jan 2022 01:42:04 +0000
+Last-Update: Sat, 15 Jan 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 183 | {covid-19,imaging} |
- orthanc | 104 | {imaging,covid-19,practice} |
- orthanc-wsi | 52 | {covid-19,his,imaging,practice,laboratory,oncology} |
+ dcmtk | 177 | {covid-19,imaging} |
+ orthanc | 102 | {imaging,covid-19,practice} |
+ orthanc-wsi | 53 | {covid-19,his,imaging,practice,laboratory,oncology} |
+ amide | 30 | {imaging} |
dicom3tools | 30 | {imaging} |
- amide | 27 | {imaging} |
- dicomscope | 25 | {imaging} |
- htsjdk | 23 | {bio-dev} |
+ dicomscope | 27 | {imaging} |
+ htsjdk | 21 | {bio-dev} |
dcm2niix | 18 | {imaging} |
orthanc-webviewer | 17 | {imaging} |
gnumed-server | 15 | {covid-19,practice} |
gdcm | 14 | {imaging,covid-19} |
minc-tools | 12 | {imaging} |
- ngs-sdk | 12 | {bio-dev} |
adun.app | 11 | {bio} |
invesalius | 11 | {imaging} |
- libminc | 11 | {imaging-dev} |
gdcm | 10 | {imaging-dev} |
+ libminc | 10 | {imaging-dev} |
+ mia | 10 | {imaging} |
+ ngs-sdk | 10 | {bio-dev} |
nifticlib | 10 | {imaging-dev} |
openslide | 10 | {imaging} |
dicomnifti | 9 | {imaging} |
- mia | 9 | {imaging} |
ngs-sdk | 9 | {bio-dev} |
orthanc-dicomweb | 9 | {covid-19,imaging} |
pixelmed | 9 | {imaging} |
nifti2dicom | 8 | {imaging} |
nifticlib | 8 | {imaging} |
- openslide | 8 | {imaging-dev} |
orthanc-postgresql | 8 | {imaging} |
+ lagan | 7 | {bio} |
mrtrix3 | 7 | {imaging} |
+ openslide | 7 | {imaging-dev} |
plastimatch | 7 | {imaging} |
- biojava-live | 6 | {bio-dev} |
- lagan | 6 | {bio} |
nifti2dicom | 6 | {imaging} |
bart-view | 5 | {imaging} |
+ biojava-live | 5 | {bio-dev} |
king | 5 | {imaging,typesetting} |
libdivsufsort | 5 | {bio-dev} |
- librg-utils-perl | 5 | {bio} |
- nipype | 5 | {imaging,imaging-dev} |
obitools | 5 | {bio} |
dicompyler | 4 | {oncology} |
elastix | 4 | {imaging} |
libncl | 4 | {bio} |
- ngs-sdk | 4 | {bio-dev} |
+ librg-utils-perl | 4 | {bio} |
+ nipype | 4 | {imaging,imaging-dev} |
orthanc-mysql | 4 | {imaging} |
pymia | 4 | {imaging-dev} |
salmon | 4 | {bio,covid-19} |
+ treeview | 4 | {bio-phylogeny,bio} |
arden | 3 | {bio,cloud} |
- bio-tradis | 3 | {bio-dev,bio} |
+ clonalorigin | 3 | {bio} |
embassy-domalign | 3 | {bio,cloud} |
+ getdata | 3 | {bio} |
ghmm | 3 | {bio} |
+ jebl2 | 3 | {bio-dev} |
melting | 3 | {cloud,bio} |
+ ngs-sdk | 3 | {bio-dev} |
orthanc-gdcm | 3 | {imaging} |
orthanc-python | 3 | {covid-19} |
oscar | 3 | {data,practice,tools} |
+ pscan-chip | 3 | {bio} |
+ saint | 3 | {bio} |
+ spread-phy | 3 | {bio,bio-phylogeny} |
staden | 3 | {bio} |
thesias | 3 | {bio,covid-19} |
tracetuner | 3 | {bio} |
- treeview | 3 | {bio-phylogeny,bio} |
anfo | 2 | {cloud,bio} |
assemblytics | 2 | {bio} |
beast-mcmc | 2 | {bio-phylogeny,bio} |
+ bio-tradis | 2 | {bio-dev,bio} |
bitseq | 2 | {bio} |
brig | 2 | {bio} |
cat-bat | 2 | {bio,covid-19} |
- clonalorigin | 2 | {bio} |
embassy-domainatrix | 2 | {bio,cloud} |
fastml | 2 | {bio} |
- getdata | 2 | {bio} |
- jebl2 | 2 | {bio-dev} |
jellyfish1 | 2 | {bio} |
lamarc | 2 | {bio} |
- libbio-mage-utils-perl | 2 | {bio-dev} |
papyrus | 2 | {imaging-dev} |
+ phyutility | 2 | {cloud,bio} |
pigx-rnaseq | 2 | {covid-19,bio} |
piler | 2 | {bio} |
- pscan-chip | 2 | {bio} |
runcircos-gui | 2 | {bio} |
- saint | 2 | {bio} |
sibsim4 | 2 | {cloud,bio} |
- spread-phy | 2 | {bio,bio-phylogeny} |
stacks | 2 | {bio} |
tvc | 2 | {bio} |
zalign | 2 | {bio,cloud} |
@@ -101,6 +101,7 @@ Last-Update: Sat, 15 Jan 2022 01:42:04 +0000
ipig | 1 | {bio} |
jmodeltest | 1 | {bio-phylogeny,bio} |
kmerresistance | 1 | {bio} |
+ libbio-mage-utils-perl | 1 | {bio-dev} |
libctapimkt | 1 | {practice} |
libpal-java | 1 | {bio-dev} |
librdp-taxonomy-tree-java | 1 | {bio-dev} |
@@ -109,7 +110,6 @@ Last-Update: Sat, 15 Jan 2022 01:42:04 +0000
mauve-aligner | 1 | {bio} |
metaphlan2 | 1 | {bio} |
mhap | 1 | {bio,bio-ngs} |
- phyutility | 1 | {cloud,bio} |
pique | 1 | {bio} |
placnet | 1 | {bio} |
plasmidseeker | 1 | {bio} |
@@ -190,8 +190,8 @@ Last-Update: Sat, 15 Jan 2022 01:42:04 +0000
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
plasmidid | 0 | {covid-19,bio} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0497e3c5140712c8890f8c3b6179c4fa65e4fd43
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0497e3c5140712c8890f8c3b6179c4fa65e4fd43
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