Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
a46b311e by Andreas Tille at 2022-01-20T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,70 +1,71 @@
-Last-Update: Thu, 20 Jan 2022 01:42:03 +0000
+Last-Update: Thu, 20 Jan 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 183 | {covid-19,imaging} |
- orthanc | 107 | {imaging,covid-19,practice} |
- orthanc-wsi | 56 | {covid-19,his,imaging,practice,laboratory,oncology} |
- dicom3tools | 31 | {imaging} |
- dicomscope | 31 | {imaging} |
- amide | 28 | {imaging} |
+ orthanc | 106 | {imaging,practice,covid-19} |
+ orthanc-wsi | 56 | {his,practice,covid-19,imaging,laboratory,oncology} |
+ dicom3tools | 30 | {imaging} |
+ dicomscope | 29 | {imaging} |
htsjdk | 28 | {bio-dev} |
- dcm2niix | 22 | {imaging} |
+ amide | 27 | {imaging} |
+ dcm2niix | 21 | {imaging} |
orthanc-webviewer | 19 | {imaging} |
- invesalius | 15 | {imaging} |
- gdcm | 14 | {imaging,covid-19} |
- gnumed-server | 14 | {covid-19,practice} |
+ gnumed-server | 14 | {practice,covid-19} |
+ invesalius | 14 | {imaging} |
+ gdcm | 13 | {imaging,covid-19} |
gdcm | 12 | {imaging-dev} |
- minc-tools | 12 | {imaging} |
+ minc-tools | 11 | {imaging} |
adun.app | 10 | {bio} |
- dicomnifti | 10 | {imaging} |
ngs-sdk | 10 | {bio-dev} |
- openslide | 10 | {imaging} |
- pixelmed | 10 | {imaging} |
lagan | 9 | {bio} |
libminc | 9 | {imaging-dev} |
- mia | 9 | {imaging} |
ngs-sdk | 9 | {bio-dev} |
nifti2dicom | 9 | {imaging} |
nifticlib | 9 | {imaging-dev} |
- orthanc-dicomweb | 9 | {covid-19,imaging} |
- mrtrix3 | 8 | {imaging} |
- nifticlib | 8 | {imaging} |
+ openslide | 9 | {imaging} |
+ orthanc-dicomweb | 9 | {imaging,covid-19} |
+ pixelmed | 9 | {imaging} |
+ biojava-live | 8 | {bio-dev} |
+ dicomnifti | 8 | {imaging} |
+ mia | 8 | {imaging} |
orthanc-postgresql | 8 | {imaging} |
- plastimatch | 8 | {imaging} |
- biojava-live | 7 | {bio-dev} |
+ mrtrix3 | 7 | {imaging} |
nifti2dicom | 7 | {imaging} |
+ nifticlib | 7 | {imaging} |
+ plastimatch | 7 | {imaging} |
libdivsufsort | 6 | {bio-dev} |
libncl | 6 | {bio} |
+ librg-utils-perl | 6 | {bio} |
obitools | 6 | {bio} |
openslide | 6 | {imaging-dev} |
dicompyler | 5 | {oncology} |
jebl2 | 5 | {bio-dev} |
- librg-utils-perl | 5 | {bio} |
orthanc-mysql | 5 | {imaging} |
- salmon | 5 | {bio,covid-19} |
+ salmon | 5 | {covid-19,bio} |
treeview | 5 | {bio-phylogeny,bio} |
- arden | 4 | {bio,cloud} |
+ arden | 4 | {cloud,bio} |
+ bio-tradis | 4 | {bio,bio-dev} |
elastix | 4 | {imaging} |
- embassy-domalign | 4 | {bio,cloud} |
+ embassy-domalign | 4 | {cloud,bio} |
getdata | 4 | {bio} |
ghmm | 4 | {bio} |
- king | 4 | {imaging,typesetting} |
melting | 4 | {cloud,bio} |
pymia | 4 | {imaging-dev} |
spread-phy | 4 | {bio,bio-phylogeny} |
+ staden | 4 | {bio} |
anfo | 3 | {cloud,bio} |
assemblytics | 3 | {bio} |
bart-view | 3 | {imaging} |
- beast-mcmc | 3 | {bio-phylogeny,bio} |
- bio-tradis | 3 | {bio-dev,bio} |
+ beast-mcmc | 3 | {bio,bio-phylogeny} |
bitseq | 3 | {bio} |
blimps | 3 | {bio} |
brig | 3 | {bio} |
clonalorigin | 3 | {bio} |
- embassy-domainatrix | 3 | {bio,cloud} |
+ embassy-domainatrix | 3 | {cloud,bio} |
fastml | 3 | {bio} |
jellyfish1 | 3 | {bio} |
+ king | 3 | {typesetting,imaging} |
lamarc | 3 | {bio} |
nipype | 3 | {imaging,imaging-dev} |
orthanc-gdcm | 3 | {imaging} |
@@ -79,22 +80,22 @@ Last-Update: Thu, 20 Jan 2022 01:42:03 +0000
sibsim4 | 3 | {cloud,bio} |
sift | 3 | {bio} |
stacks | 3 | {bio} |
- staden | 3 | {bio} |
- thesias | 3 | {bio,covid-19} |
+ thesias | 3 | {covid-19,bio} |
tracetuner | 3 | {bio} |
tvc | 3 | {bio} |
- zalign | 3 | {bio,cloud} |
+ zalign | 3 | {cloud,bio} |
biomaj3-cli | 2 | {cloud} |
canu | 2 | {bio} |
- cat-bat | 2 | {bio,covid-19} |
+ cat-bat | 2 | {covid-19,bio} |
clonalframeml | 2 | {bio,covid-19} |
cmtk | 2 | {imaging} |
delly | 2 | {bio,covid-19} |
- embassy-domsearch | 2 | {bio,cloud} |
+ embassy-domsearch | 2 | {cloud,bio} |
gatb-core | 2 | {bio} |
hinge | 2 | {bio} |
ipig | 2 | {bio} |
jmodeltest | 2 | {bio-phylogeny,bio} |
+ libbio-mage-utils-perl | 2 | {bio-dev} |
libpal-java | 2 | {bio-dev} |
librdp-taxonomy-tree-java | 2 | {bio-dev} |
mauve-aligner | 2 | {bio} |
@@ -118,11 +119,10 @@ Last-Update: Thu, 20 Jan 2022 01:42:03 +0000
trace2dbest | 2 | {bio} |
atropos | 1 | {bio} |
ctn | 1 | {imaging-dev} |
- cufflinks | 1 | {cloud,bio} |
- dextractor | 1 | {bio,covid-19} |
+ cufflinks | 1 | {bio,cloud} |
+ dextractor | 1 | {covid-19,bio} |
emmax | 1 | {bio} |
kmerresistance | 1 | {bio} |
- libbio-mage-utils-perl | 1 | {bio-dev} |
libctapimkt | 1 | {practice} |
libsbml | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
@@ -130,14 +130,14 @@ Last-Update: Thu, 20 Jan 2022 01:42:03 +0000
mssstest | 1 | {tools} |
pigx-rnaseq | 1 | {covid-19,bio} |
pique | 1 | {bio} |
- plasmidid | 1 | {covid-19,bio} |
- pplacer | 1 | {covid-19,bio-phylogeny,bio} |
+ plasmidid | 1 | {bio,covid-19} |
+ pplacer | 1 | {bio,bio-phylogeny,covid-19} |
python-wdlparse | 1 | {bio-dev} |
skesa | 1 | {bio} |
- spaln | 1 | {bio,covid-19} |
+ spaln | 1 | {covid-19,bio} |
srf | 1 | {bio-dev} |
- tophat-recondition | 1 | {bio,covid-19} |
- varscan | 1 | {covid-19,bio} |
+ tophat-recondition | 1 | {covid-19,bio} |
+ varscan | 1 | {bio,covid-19} |
vienna-rna | 1 | {covid-19,bio} |
acedb | 0 | {bio,cloud} |
bambamc | 0 | {bio-dev} |
@@ -168,9 +168,9 @@ Last-Update: Thu, 20 Jan 2022 01:42:03 +0000
libgenome | 0 | {bio-dev} |
libgkarrays | 0 | {bio-dev} |
libhmsbeagle | 0 | {bio-dev} |
- libics | 0 | {covid-19,imaging-dev} |
+ libics | 0 | {imaging-dev,covid-19} |
libjloda-java | 0 | {bio-dev} |
- libmaus2 | 0 | {covid-19,bio-dev} |
+ libmaus2 | 0 | {bio-dev,covid-19} |
libmems | 0 | {bio-dev} |
libmialm | 0 | {imaging-dev} |
libmuscle | 0 | {bio-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/a46b311e83c702dd97588ea26b88d2eb94963885
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/a46b311e83c702dd97588ea26b88d2eb94963885
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