Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
d6c97e48 by Andreas Tille at 2022-01-24T13:42:22+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,46 +1,47 @@
-Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
+Last-Update: Mon, 24 Jan 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 183 | {covid-19,imaging} |
- orthanc | 106 | {imaging,covid-19,practice} |
- orthanc-wsi | 56 | {practice,laboratory,covid-19,imaging,his,oncology} |
- htsjdk | 32 | {bio-dev} |
- dicom3tools | 29 | {imaging} |
- dicomscope | 29 | {imaging} |
- amide | 28 | {imaging} |
- dcm2niix | 22 | {imaging} |
+ dcmtk | 181 | {covid-19,imaging} |
+ orthanc | 105 | {imaging,covid-19,practice} |
+ orthanc-wsi | 57 | {practice,laboratory,covid-19,imaging,his,oncology} |
+ htsjdk | 33 | {bio-dev} |
+ amide | 29 | {imaging} |
+ dicom3tools | 28 | {imaging} |
+ dicomscope | 28 | {imaging} |
+ dcm2niix | 21 | {imaging} |
orthanc-webviewer | 20 | {imaging} |
- invesalius | 16 | {imaging} |
+ invesalius | 15 | {imaging} |
gnumed-server | 14 | {practice,covid-19} |
- gdcm | 13 | {covid-19,imaging} |
+ ngs-sdk | 14 | {bio-dev} |
+ gdcm | 12 | {covid-19,imaging} |
gdcm | 12 | {imaging-dev} |
- minc-tools | 12 | {imaging} |
- ngs-sdk | 12 | {bio-dev} |
- adun.app | 11 | {bio} |
- openslide | 10 | {imaging} |
- dicomnifti | 9 | {imaging} |
- lagan | 9 | {bio} |
- mia | 9 | {imaging} |
+ minc-tools | 11 | {imaging} |
+ adun.app | 10 | {bio} |
+ lagan | 10 | {bio} |
ngs-sdk | 9 | {bio-dev} |
nifti2dicom | 9 | {imaging} |
+ openslide | 9 | {imaging} |
orthanc-dicomweb | 9 | {imaging,covid-19} |
- pixelmed | 9 | {imaging} |
biojava-live | 8 | {bio-dev} |
+ dicomnifti | 8 | {imaging} |
+ mia | 8 | {imaging} |
mrtrix3 | 8 | {imaging} |
- nifticlib | 8 | {imaging} |
orthanc-postgresql | 8 | {imaging} |
- plastimatch | 8 | {imaging} |
+ pixelmed | 8 | {imaging} |
libminc | 7 | {imaging-dev} |
nifti2dicom | 7 | {imaging} |
nifticlib | 7 | {imaging-dev} |
+ nifticlib | 7 | {imaging} |
+ plastimatch | 7 | {imaging} |
libncl | 6 | {bio} |
librg-utils-perl | 6 | {bio} |
+ ngs-sdk | 6 | {bio-dev} |
obitools | 6 | {bio} |
- openslide | 6 | {imaging-dev} |
dicompyler | 5 | {oncology} |
jebl2 | 5 | {bio-dev} |
nipype | 5 | {imaging-dev,imaging} |
+ openslide | 5 | {imaging-dev} |
orthanc-mysql | 5 | {imaging} |
salmon | 5 | {bio,covid-19} |
treeview | 5 | {bio-phylogeny,bio} |
@@ -50,10 +51,10 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
embassy-domalign | 4 | {cloud,bio} |
getdata | 4 | {bio} |
ghmm | 4 | {bio} |
+ jellyfish1 | 4 | {bio} |
king | 4 | {typesetting,imaging} |
libdivsufsort | 4 | {bio-dev} |
melting | 4 | {bio,cloud} |
- ngs-sdk | 4 | {bio-dev} |
pymia | 4 | {imaging-dev} |
spread-phy | 4 | {bio-phylogeny,bio} |
staden | 4 | {bio} |
@@ -65,15 +66,15 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
bitseq | 3 | {bio} |
blimps | 3 | {bio} |
brig | 3 | {bio} |
+ canu | 3 | {bio} |
clonalorigin | 3 | {bio} |
embassy-domainatrix | 3 | {bio,cloud} |
fastml | 3 | {bio} |
- jellyfish1 | 3 | {bio} |
lamarc | 3 | {bio} |
libsbml | 3 | {bio-dev} |
+ mhap | 3 | {bio-ngs,bio} |
orthanc-gdcm | 3 | {imaging} |
orthanc-python | 3 | {covid-19} |
- oscar | 3 | {data,tools,practice} |
phyutility | 3 | {bio,cloud} |
piler | 3 | {bio} |
pscan-chip | 3 | {bio} |
@@ -87,11 +88,11 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
tvc | 3 | {bio} |
zalign | 3 | {cloud,bio} |
biomaj3-cli | 2 | {cloud} |
- canu | 2 | {bio} |
cat-bat | 2 | {bio,covid-19} |
clonalframeml | 2 | {covid-19,bio} |
cmtk | 2 | {imaging} |
delly | 2 | {covid-19,bio} |
+ dextractor | 2 | {bio,covid-19} |
embassy-domsearch | 2 | {cloud,bio} |
gatb-core | 2 | {bio} |
hinge | 2 | {bio} |
@@ -102,7 +103,7 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
librdp-taxonomy-tree-java | 2 | {bio-dev} |
mauve-aligner | 2 | {bio} |
metaphlan2 | 2 | {bio} |
- mhap | 2 | {bio-ngs,bio} |
+ oscar | 2 | {data,tools,practice} |
placnet | 2 | {bio} |
plasmidseeker | 2 | {bio} |
proalign | 2 | {bio,bio-phylogeny} |
@@ -121,7 +122,6 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
trace2dbest | 2 | {bio} |
atropos | 1 | {bio} |
cufflinks | 1 | {bio,cloud} |
- dextractor | 1 | {bio,covid-19} |
emmax | 1 | {bio} |
kmerresistance | 1 | {bio} |
libgenome | 1 | {bio-dev} |
@@ -202,9 +202,10 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
sight | 0 | {imaging-dev} |
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {covid-19,bio} |
+ snpeff | 0 | {bio,covid-19} |
tipp | 0 | {bio,covid-19} |
varna | 0 | {bio} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
-(234 rows)
+(235 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d6c97e48abd0397fe05a178ada1aa12ee7e43d85
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d6c97e48abd0397fe05a178ada1aa12ee7e43d85
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