Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
41e243e1 by Andreas Tille at 2022-01-26T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,60 +1,59 @@
-Last-Update: Wed, 26 Jan 2022 01:42:03 +0000
+Last-Update: Wed, 26 Jan 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 181 | {covid-19,imaging} |
- orthanc | 104 | {imaging,covid-19,practice} |
+ orthanc | 105 | {imaging,covid-19,practice} |
orthanc-wsi | 56 | {practice,laboratory,covid-19,imaging,his,oncology} |
- htsjdk | 32 | {bio-dev} |
+ htsjdk | 34 | {bio-dev} |
dicom3tools | 29 | {imaging} |
- amide | 28 | {imaging} |
- dicomscope | 28 | {imaging} |
- dcm2niix | 23 | {imaging} |
+ amide | 27 | {imaging} |
+ dicomscope | 26 | {imaging} |
+ dcm2niix | 24 | {imaging} |
orthanc-webviewer | 20 | {imaging} |
ngs-sdk | 15 | {bio-dev} |
gnumed-server | 14 | {practice,covid-19} |
- invesalius | 14 | {imaging} |
gdcm | 13 | {covid-19,imaging} |
+ invesalius | 12 | {imaging} |
minc-tools | 12 | {imaging} |
- gdcm | 11 | {imaging-dev} |
+ adun.app | 10 | {bio} |
+ gdcm | 10 | {imaging-dev} |
lagan | 10 | {bio} |
- adun.app | 9 | {bio} |
- ngs-sdk | 9 | {bio-dev} |
nifti2dicom | 9 | {imaging} |
- openslide | 9 | {imaging} |
orthanc-dicomweb | 9 | {imaging,covid-19} |
pixelmed | 9 | {imaging} |
biojava-live | 8 | {bio-dev} |
dicomnifti | 8 | {imaging} |
+ libminc | 8 | {imaging-dev} |
+ librg-utils-perl | 8 | {bio} |
mia | 8 | {imaging} |
mrtrix3 | 8 | {imaging} |
+ ngs-sdk | 8 | {bio-dev} |
+ nifticlib | 8 | {imaging-dev} |
nifticlib | 8 | {imaging} |
+ openslide | 8 | {imaging} |
orthanc-postgresql | 8 | {imaging} |
- libminc | 7 | {imaging-dev} |
- librg-utils-perl | 7 | {bio} |
+ ngs-sdk | 7 | {bio-dev} |
nifti2dicom | 7 | {imaging} |
- nifticlib | 7 | {imaging-dev} |
plastimatch | 7 | {imaging} |
libncl | 6 | {bio} |
- ngs-sdk | 6 | {bio-dev} |
obitools | 6 | {bio} |
- dicompyler | 5 | {oncology} |
jebl2 | 5 | {bio-dev} |
+ libdivsufsort | 5 | {bio-dev} |
nipype | 5 | {imaging-dev,imaging} |
- openslide | 5 | {imaging-dev} |
orthanc-mysql | 5 | {imaging} |
salmon | 5 | {bio,covid-19} |
treeview | 5 | {bio-phylogeny,bio} |
arden | 4 | {bio,cloud} |
bio-tradis | 4 | {bio,bio-dev} |
+ dicompyler | 4 | {oncology} |
elastix | 4 | {imaging} |
embassy-domalign | 4 | {cloud,bio} |
getdata | 4 | {bio} |
ghmm | 4 | {bio} |
jellyfish1 | 4 | {bio} |
king | 4 | {typesetting,imaging} |
- libdivsufsort | 4 | {bio-dev} |
- melting | 4 | {bio,cloud} |
+ openslide | 4 | {imaging-dev} |
pymia | 4 | {imaging-dev} |
spread-phy | 4 | {bio-phylogeny,bio} |
staden | 4 | {bio} |
@@ -70,10 +69,13 @@ Last-Update: Wed, 26 Jan 2022 01:42:03 +0000
clonalorigin | 3 | {bio} |
embassy-domainatrix | 3 | {bio,cloud} |
lamarc | 3 | {bio} |
+ libbio-mage-utils-perl | 3 | {bio-dev} |
libsbml | 3 | {bio-dev} |
+ melting | 3 | {bio,cloud} |
mhap | 3 | {bio-ngs,bio} |
orthanc-gdcm | 3 | {imaging} |
orthanc-python | 3 | {covid-19} |
+ oscar | 3 | {data,tools,practice} |
phyutility | 3 | {bio,cloud} |
piler | 3 | {bio} |
rambo-k | 3 | {bio} |
@@ -97,12 +99,10 @@ Last-Update: Wed, 26 Jan 2022 01:42:03 +0000
hinge | 2 | {bio} |
ipig | 2 | {bio} |
jmodeltest | 2 | {bio,bio-phylogeny} |
- libbio-mage-utils-perl | 2 | {bio-dev} |
libpal-java | 2 | {bio-dev} |
librdp-taxonomy-tree-java | 2 | {bio-dev} |
mauve-aligner | 2 | {bio} |
metaphlan2 | 2 | {bio} |
- oscar | 2 | {data,tools,practice} |
placnet | 2 | {bio} |
plasmidseeker | 2 | {bio} |
proalign | 2 | {bio,bio-phylogeny} |
@@ -124,10 +124,12 @@ Last-Update: Wed, 26 Jan 2022 01:42:03 +0000
cufflinks | 1 | {bio,cloud} |
emmax | 1 | {bio} |
kmerresistance | 1 | {bio} |
+ libchado-perl | 1 | {bio-dev} |
libgenome | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
microbegps | 1 | {bio} |
mssstest | 1 | {tools} |
+ opencfu | 1 | {laboratory} |
pigx-rnaseq | 1 | {bio,covid-19} |
pique | 1 | {bio} |
plasmidid | 1 | {covid-19,bio} |
@@ -164,7 +166,6 @@ Last-Update: Wed, 26 Jan 2022 01:42:03 +0000
libbpp-raa | 0 | {bio-dev} |
libbpp-seq | 0 | {bio-dev} |
libbpp-seq-omics | 0 | {bio-dev} |
- libchado-perl | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
libgkarrays | 0 | {bio-dev} |
libhmsbeagle | 0 | {bio-dev} |
@@ -187,15 +188,14 @@ Last-Update: Wed, 26 Jan 2022 01:42:03 +0000
milib | 0 | {covid-19,bio-dev} |
ncbi-vdb | 0 | {bio-dev} |
nifticlib | 0 | {imaging-dev} |
- opencfu | 0 | {laboratory} |
opensurgsim | 0 | {imaging-dev} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
python-seqcluster | 0 | {bio} |
+ python-seqcluster | 0 | {covid-19,bio-dev} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
shovill | 0 | {covid-19,bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/41e243e138ec4202a8d587d963a69c53d407136e
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/41e243e138ec4202a8d587d963a69c53d407136e
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