Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
38a15811 by Andreas Tille at 2022-07-04T13:42:30+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,22 +1,22 @@
-Last-Update: Mon, 04 Jul 2022 01:42:03 +0000
+Last-Update: Mon, 04 Jul 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 165 | {covid-19,imaging} |
- orthanc | 96 | {imaging,covid-19,practice} |
- orthanc-wsi | 47 | {covid-19,imaging,his,laboratory,oncology,practice} |
- node-shiny-server | 39 | {covid-19,epi} |
- amide | 19 | {imaging} |
+ dcmtk | 168 | {covid-19,imaging} |
+ orthanc | 97 | {imaging,covid-19,practice} |
+ orthanc-wsi | 48 | {covid-19,imaging,his,laboratory,oncology,practice} |
+ node-shiny-server | 40 | {covid-19,epi} |
+ amide | 20 | {imaging} |
dicomscope | 18 | {imaging} |
orthanc-webviewer | 15 | {imaging} |
- gdcm | 13 | {imaging-dev} |
+ gdcm | 12 | {imaging-dev} |
gnumed-server | 11 | {practice,covid-19} |
- invesalius | 11 | {imaging} |
adun.app | 10 | {bio} |
+ invesalius | 10 | {imaging} |
+ gdcm | 9 | {imaging,covid-19} |
libminc | 9 | {imaging-dev} |
- mrtrix3 | 9 | {imaging} |
orthanc-dicomweb | 9 | {covid-19,imaging} |
- gdcm | 8 | {imaging,covid-19} |
+ mrtrix3 | 8 | {imaging} |
plastimatch | 8 | {imaging} |
pixelmed | 7 | {imaging} |
librg-utils-perl | 6 | {bio} |
@@ -25,34 +25,39 @@ Last-Update: Mon, 04 Jul 2022 01:42:03 +0000
king | 5 | {typesetting,imaging} |
orthanc-gdcm | 5 | {imaging} |
orthanc-postgresql | 5 | {imaging} |
+ salmon | 5 | {bio,covid-19} |
biojava-live | 4 | {bio-dev} |
dicompyler | 4 | {oncology} |
- libsbml | 4 | {bio-dev} |
nipype | 4 | {imaging-dev,imaging} |
oscar | 4 | {tools,practice,data} |
cmtk | 3 | {imaging} |
getdata | 3 | {bio} |
jebl2 | 3 | {bio-dev} |
+ obitools | 3 | {bio} |
pymia | 3 | {imaging-dev} |
- salmon | 3 | {bio,covid-19} |
staden | 3 | {bio} |
treeview | 3 | {bio,bio-phylogeny} |
+ anfo | 2 | {cloud,bio} |
bart-view | 2 | {imaging} |
blimps | 2 | {bio} |
- obitools | 2 | {bio} |
+ ghmm | 2 | {bio} |
+ libsbml | 2 | {bio-dev} |
orthanc-mysql | 2 | {imaging} |
papyrus | 2 | {imaging-dev} |
piler | 2 | {bio} |
python-wdlparse | 2 | {bio-dev} |
runcircos-gui | 2 | {bio} |
sift | 2 | {bio} |
- anfo | 1 | {cloud,bio} |
+ acedb | 1 | {bio,cloud} |
bio-tradis | 1 | {bio,bio-dev} |
canu | 1 | {bio} |
+ cat-bat | 1 | {covid-19,bio} |
cufflinks | 1 | {cloud,bio} |
+ dextractor | 1 | {covid-19,bio} |
embassy-domainatrix | 1 | {bio,cloud} |
+ emmax | 1 | {bio} |
emperor | 1 | {bio} |
- ghmm | 1 | {bio} |
+ gatb-core | 1 | {bio} |
lamarc | 1 | {bio} |
libbio-mage-utils-perl | 1 | {bio-dev} |
libdivsufsort | 1 | {bio-dev} |
@@ -61,17 +66,19 @@ Last-Update: Mon, 04 Jul 2022 01:42:03 +0000
libncl | 1 | {bio} |
libvistaio | 1 | {imaging-dev} |
melting | 1 | {bio,cloud} |
+ opencfu | 1 | {laboratory} |
orthanc-python | 1 | {covid-19} |
phyutility | 1 | {bio,cloud} |
pigx-rnaseq | 1 | {bio,covid-19} |
pscan-chip | 1 | {bio} |
saint | 1 | {bio} |
sibsim4 | 1 | {cloud,bio} |
+ skesa | 1 | {bio} |
spread-phy | 1 | {bio,bio-phylogeny} |
stacks | 1 | {bio} |
+ tophat-recondition | 1 | {covid-19,bio} |
varna | 1 | {bio} |
vienna-rna | 1 | {bio,covid-19} |
- acedb | 0 | {bio,cloud} |
arden | 0 | {bio,cloud} |
assemblytics | 0 | {bio} |
bambamc | 0 | {bio-dev} |
@@ -82,21 +89,17 @@ Last-Update: Mon, 04 Jul 2022 01:42:03 +0000
bitseq | 0 | {bio} |
brig | 0 | {bio} |
camp | 0 | {imaging-dev} |
- cat-bat | 0 | {covid-19,bio} |
clonalframeml | 0 | {covid-19,bio} |
clonalorigin | 0 | {bio} |
ctn | 0 | {imaging-dev} |
cutesv | 0 | {bio} |
delly | 0 | {bio,covid-19} |
- dextractor | 0 | {covid-19,bio} |
eegdev | 0 | {imaging-dev} |
embassy-domalign | 0 | {bio,cloud} |
embassy-domsearch | 0 | {bio,cloud} |
emboss-explorer | 0 | {bio} |
- emmax | 0 | {bio} |
fastml | 0 | {bio} |
fis-gtm | 0 | {his} |
- gatb-core | 0 | {bio} |
gatb-core | 0 | {bio-dev} |
hinge | 0 | {bio} |
htscodecs | 0 | {bio-dev,covid-19} |
@@ -142,7 +145,6 @@ Last-Update: Mon, 04 Jul 2022 01:42:03 +0000
microbegps | 0 | {bio} |
milib | 0 | {bio-dev,covid-19} |
ncbi-vdb | 0 | {bio-dev} |
- opencfu | 0 | {laboratory} |
orthanc-imagej | 0 | {imaging} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
@@ -153,8 +155,8 @@ Last-Update: Mon, 04 Jul 2022 01:42:03 +0000
pplacer | 0 | {covid-19,bio,bio-phylogeny} |
proalign | 0 | {bio,bio-phylogeny} |
provean | 0 | {bio} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {bio-dev,covid-19} |
+ python-seqcluster | 0 | {bio} |
qcumber | 0 | {bio} |
rambo-k | 0 | {bio} |
rdp-alignment | 0 | {bio} |
@@ -167,7 +169,6 @@ Last-Update: Mon, 04 Jul 2022 01:42:03 +0000
sga | 0 | {bio} |
sight | 0 | {imaging-dev} |
simpleitk | 0 | {imaging-dev} |
- skesa | 0 | {bio} |
smrtanalysis | 0 | {bio,covid-19} |
soapaligner | 0 | {bio} |
soapsnp | 0 | {bio} |
@@ -177,7 +178,6 @@ Last-Update: Mon, 04 Jul 2022 01:42:03 +0000
surankco | 0 | {bio} |
thesias | 0 | {bio,covid-19} |
tipp | 0 | {covid-19,bio} |
- tophat-recondition | 0 | {covid-19,bio} |
trace2dbest | 0 | {bio} |
tracetuner | 0 | {bio} |
tvc | 0 | {bio} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,108 +1,108 @@
-Last-Update: Mon, 04 Jul 2022 01:42:04 +0000
+Last-Update: Mon, 04 Jul 2022 13:42:05 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 2888 | {viewing} |
- sympy | 2048 | {physics,nanoscale-physics} |
- armadillo | 176 | {mathematics-dev} |
- suitesparse | 137 | {numericalcomputation,mathematics-dev} |
- python-pyqtgraph | 131 | {viewing} |
+ gts | 2900 | {viewing} |
+ sympy | 2044 | {physics,nanoscale-physics} |
+ armadillo | 177 | {mathematics-dev} |
+ suitesparse | 140 | {numericalcomputation,mathematics-dev} |
+ python-pyqtgraph | 132 | {viewing} |
nltk | 93 | {linguistics} |
- atlas | 88 | {mathematics-dev} |
- arpack | 55 | {mathematics-dev} |
- cypari2 | 50 | {mathematics-dev} |
- imview | 44 | {viewing} |
- arduino-mk | 40 | {robotics} |
- rubiks | 38 | {geometry,mathematics} |
- fftw | 36 | {mathematics-dev,physics-dev,meteorology-dev} |
- flintqs | 36 | {mathematics} |
+ atlas | 91 | {mathematics-dev} |
+ arpack | 54 | {mathematics-dev} |
+ cypari2 | 48 | {mathematics-dev} |
+ imview | 45 | {viewing} |
+ arduino-mk | 41 | {robotics} |
+ rubiks | 39 | {geometry,mathematics} |
+ fftw | 37 | {mathematics-dev,physics-dev,meteorology-dev} |
+ flintqs | 37 | {mathematics} |
pyzo | 24 | {numericalcomputation} |
- bossa | 22 | {devices} |
- feedgnuplot | 22 | {viewing} |
+ bossa | 23 | {devices} |
+ sketch | 23 | {typesetting} |
libmatio | 22 | {mathematics-dev} |
- sketch | 22 | {typesetting} |
+ feedgnuplot | 21 | {viewing} |
ntl | 20 | {mathematics-dev} |
- gts | 18 | {viewing-dev} |
+ gts | 19 | {viewing-dev} |
ppl | 17 | {numericalcomputation} |
- cernlib | 16 | {highenergy-physics} |
+ fftw | 16 | {physics-dev,meteorology-dev,mathematics-dev} |
guidata | 16 | {dataacquisition-dev} |
guiqwt | 16 | {numericalcomputation,viewing} |
- fftw | 15 | {physics-dev,meteorology-dev,mathematics-dev} |
- flann | 15 | {mathematics-dev,engineering-dev} |
- neuron | 15 | {neuroscience-modeling,highenergy-physics,simulations} |
- opencascade | 15 | {simulations} |
+ opencascade | 16 | {simulations} |
+ cernlib | 15 | {highenergy-physics} |
+ mathgl | 15 | {viewing} |
+ flann | 14 | {mathematics-dev,engineering-dev} |
geg | 14 | {viewing} |
+ getdp | 14 | {simulations,mathematics,engineering} |
gfsview | 14 | {viewing} |
libm4ri | 14 | {mathematics-dev} |
- mathgl | 14 | {viewing} |
+ neuron | 14 | {neuroscience-modeling,highenergy-physics,simulations} |
ros-ros-environment | 14 | {robotics-dev} |
- getdp | 13 | {simulations,mathematics,engineering} |
+ coinor-symphony | 13 | {numericalcomputation,mathematics,logic} |
rheolef | 13 | {mathematics} |
- cernlib | 12 | {highenergy-physics-dev} |
- coinor-symphony | 12 | {numericalcomputation,mathematics,logic} |
opticalraytracer | 12 | {physics} |
+ cernlib | 11 | {highenergy-physics-dev} |
+ debian-science | 11 | {nanoscale-physics,mathematics,economics,physics,machine-learning} |
lxi-tools | 11 | {engineering,dataacquisition} |
- debian-science | 10 | {nanoscale-physics,mathematics,economics,physics,machine-learning} |
+ form | 10 | {mathematics} |
libm4rie | 10 | {mathematics-dev} |
+ matlab-support | 10 | {numericalcomputation,mathematics} |
picosat | 10 | {logic} |
+ polylib | 10 | {mathematics} |
+ scalapack | 10 | {nanoscale-physics-dev} |
scram | 10 | {engineering} |
tango | 10 | {dataacquisition} |
- cliquer | 9 | {mathematics} |
+ apophenia | 9 | {statistics} |
+ auto-07p | 9 | {mathematics} |
cliquer | 9 | {mathematics-dev} |
code-saturne | 9 | {engineering-dev,mathematics-dev} |
- form | 9 | {mathematics} |
libcgns | 9 | {engineering} |
libzn-poly | 9 | {mathematics-dev} |
- matlab-support | 9 | {numericalcomputation,mathematics} |
- neuron | 9 | {highenergy-physics-dev} |
- scalapack | 9 | {nanoscale-physics-dev} |
syrthes | 9 | {engineering} |
+ toulbar2 | 9 | {numericalcomputation,physics,logic,mathematics} |
uctodata | 9 | {linguistics} |
vitables | 9 | {numericalcomputation} |
- apophenia | 8 | {statistics} |
- auto-07p | 8 | {mathematics} |
+ cliquer | 8 | {mathematics} |
+ debian-science | 8 | {economics,physics,statistics,nanoscale-physics} |
+ debian-science | 8 | {neuroscience-cognitive,machine-learning} |
iml | 8 | {mathematics-dev} |
+ ipe-tools | 8 | {typesetting} |
libhomfly | 8 | {mathematics-dev} |
libvigraimpex | 8 | {imageanalysis-dev,machine-learning} |
lrcalc | 8 | {mathematics-dev} |
muparser | 8 | {mathematics-dev} |
- pcl | 8 | {robotics-dev} |
- polylib | 8 | {mathematics} |
- toulbar2 | 8 | {numericalcomputation,physics,logic,mathematics} |
+ neuron | 8 | {highenergy-physics-dev} |
+ python-escript | 8 | {simulations,numericalcomputation,engineering} |
ucto | 8 | {linguistics} |
- debian-science | 7 | {economics,physics,statistics,nanoscale-physics} |
- debian-science | 7 | {neuroscience-cognitive,machine-learning} |
- ipe-tools | 7 | {typesetting} |
- python-escript | 7 | {simulations,numericalcomputation,engineering} |
- teem | 7 | {imageanalysis} |
- urdfdom-headers | 7 | {robotics-dev} |
+ lrcalc | 7 | {mathematics} |
+ pcl | 7 | {robotics-dev} |
+ debian-science | 6 | {physics,nanoscale-physics,economics,machine-learning} |
+ dune-uggrid | 6 | {mathematics-dev} |
dxsamples | 6 | {nanoscale-physics} |
gf2x | 6 | {mathematics-dev} |
- lrcalc | 6 | {mathematics} |
+ jeuclid | 6 | {typesetting,viewing} |
+ libmatheval | 6 | {mathematics} |
opencascade | 6 | {simulations} |
+ ros-rosconsole | 6 | {robotics-dev} |
+ tango | 6 | {dataacquisition} |
+ teem | 6 | {imageanalysis} |
+ urdfdom-headers | 6 | {robotics-dev} |
+ alberta | 5 | {engineering-dev} |
coinmp | 5 | {mathematics-dev,numericalcomputation,logic} |
debian-science | 5 | {electrophysiology} |
- debian-science | 5 | {physics,nanoscale-physics,economics,machine-learning} |
- dune-uggrid | 5 | {mathematics-dev} |
- jeuclid | 5 | {typesetting,viewing} |
+ hpcc | 5 | {numericalcomputation,distributedcomputing} |
+ libcgns | 5 | {engineering-dev} |
+ libgetdata | 5 | {dataacquisition} |
libitpp | 5 | {engineering-dev,mathematics-dev} |
- libmatheval | 5 | {mathematics} |
morse-simulator | 5 | {robotics} |
+ psurface | 5 | {numericalcomputation} |
qwtplot3d | 5 | {viewing-dev} |
ratpoints | 5 | {mathematics-dev} |
- ros-rosconsole | 5 | {robotics-dev} |
- tango | 5 | {dataacquisition} |
- alberta | 4 | {engineering-dev} |
debian-science | 4 | {tools} |
etsf-io | 4 | {nanoscale-physics,physics} |
- hpcc | 4 | {numericalcomputation,distributedcomputing} |
jhdf | 4 | {engineering} |
libccp4 | 4 | {nanoscale-physics-dev} |
- libcgns | 4 | {engineering-dev} |
- libgetdata | 4 | {dataacquisition} |
- psurface | 4 | {numericalcomputation} |
+ libmatheval | 4 | {mathematics-dev} |
apophenia | 3 | {statistics} |
- cimg | 3 | {imageanalysis-dev} | {x11::library}
clipper | 3 | {nanoscale-physics-dev} |
code-saturne | 3 | {mathematics-dev,engineering-dev} |
dimbl | 3 | {linguistics} |
@@ -111,30 +111,30 @@ Last-Update: Mon, 04 Jul 2022 01:42:04 +0000
frog | 3 | {linguistics} |
irstlm | 3 | {linguistics} |
jhdf | 3 | {engineering-dev} |
+ libgetdata | 3 | {dataacquisition-dev} |
libgtkdatabox | 3 | {engineering-dev,viewing-dev} |
- libmatheval | 3 | {mathematics-dev} |
looptools | 3 | {highenergy-physics} |
mbt | 3 | {linguistics} |
mrmpi | 3 | {tools} |
newmat | 3 | {mathematics-dev} |
openmx | 3 | {nanoscale-physics,physics} |
+ simbody | 3 | {robotics-dev} |
timbl | 3 | {linguistics} |
apertium-streamparser | 2 | {linguistics} |
cbflib | 2 | {nanoscale-physics-dev} |
cernlib | 2 | {highenergy-physics} |
+ cimg | 2 | {imageanalysis-dev} | {x11::library}
debian-science | 2 | {physics} |
debian-science | 2 | {nanoscale-physics-dev} |
debian-science | 2 | {neuroscience-cognitive} |
debian-science | 2 | {psychophysics} |
- harp | 2 | {meteorology} |
ipe-tools | 2 | {typesetting} |
- libgetdata | 2 | {dataacquisition-dev} |
mbtserver | 2 | {linguistics} |
+ metis-edf | 2 | {engineering,numericalcomputation} |
openstereogram | 2 | {tools} |
qd | 2 | {mathematics-dev} |
sac2mseed | 2 | {geography} |
sardana | 2 | {dataacquisition} |
- simbody | 2 | {robotics-dev} |
tango | 2 | {dataacquisition-dev} |
taurus | 2 | {dataacquisition} |
timblserver | 2 | {linguistics} |
@@ -147,14 +147,16 @@ Last-Update: Mon, 04 Jul 2022 01:42:04 +0000
debian-science | 1 | {electrophysiology} |
dune-localfunctions | 1 | {mathematics-dev} |
gemmlowp | 1 | {mathematics-dev} |
+ harp | 1 | {meteorology} |
libgetdata | 1 | {dataacquisition-dev} |
libvigraimpex | 1 | {imageanalysis-dev,machine-learning} |
libxsmm | 1 | {mathematics-dev} |
looptools | 1 | {highenergy-physics-dev} |
metis-edf | 1 | {engineering-dev} |
- metis-edf | 1 | {engineering,numericalcomputation} |
neuron | 1 | {highenergy-physics-dev} |
+ openctm | 1 | {physics-dev} |
openigtlink | 1 | {robotics-dev} |
+ openturns | 1 | {meteorology-dev,mathematics-dev,statistics,engineering,mathematics,meteorology} |
ros-opencv-apps | 1 | {robotics} |
tamuanova | 1 | {statistics} |
apertium-afr-nld | 0 | {linguistics} |
@@ -175,8 +177,8 @@ Last-Update: Mon, 04 Jul 2022 01:42:04 +0000
asl | 0 | {physics-dev} |
calculix-ccx-doc | 0 | {numericalcomputation,engineering,simulations} |
calculix-ccx-test | 0 | {engineering,simulations,numericalcomputation} |
- cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {physics,highenergy-physics} |
+ cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics-dev} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
@@ -206,12 +208,10 @@ Last-Update: Mon, 04 Jul 2022 01:42:04 +0000
looptools | 0 | {highenergy-physics-dev} |
mclibs | 0 | {highenergy-physics} |
neartree | 0 | {mathematics-dev,numericalcomputation} |
- ompl | 0 | {robotics} |
ompl | 0 | {robotics-dev} |
- openctm | 0 | {physics-dev} |
+ ompl | 0 | {robotics} |
openturns | 0 | {meteorology-dev,engineering-dev,mathematics-dev} |
openturns | 0 | {engineering-dev,meteorology-dev,mathematics-dev} |
- openturns | 0 | {meteorology-dev,mathematics-dev,statistics,engineering,mathematics,meteorology} |
psurface | 0 | {numericalcomputation} |
pycollada | 0 | {engineering-dev} |
python-aws-xray-sdk | 0 | {dataacquisition-dev} |
@@ -219,8 +219,8 @@ Last-Update: Mon, 04 Jul 2022 01:42:04 +0000
qrupdate | 0 | {mathematics-dev} |
quadrule | 0 | {mathematics-dev} |
robot-testing-framework | 0 | {robotics-dev} |
- ros-metapackages | 0 | {robotics-dev} |
ros-metapackages | 0 | {robotics} |
+ ros-metapackages | 0 | {robotics-dev} |
sagemath-database-combinatorial-designs | 0 | {mathematics} |
sagemath-database-conway-polynomials | 0 | {mathematics} |
sagemath-database-elliptic-curves | 0 | {mathematics} |
@@ -229,8 +229,8 @@ Last-Update: Mon, 04 Jul 2022 01:42:04 +0000
siscone | 0 | {highenergy-physics-dev} |
slicot | 0 | {engineering-dev,robotics-dev} |
sparskit | 0 | {mathematics-dev} |
- ssm | 0 | {nanoscale-physics} |
ssm | 0 | {nanoscale-physics-dev} |
+ ssm | 0 | {nanoscale-physics} |
tachyon | 0 | {mathematics} |
tango | 0 | {dataacquisition} |
triangle | 0 | {physics-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
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