[med-svn] [Git][med-team/tnseq-transit][upstream] New upstream version 3.2.5

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch upstream at Debian Med / tnseq-transit


Commits:
8f730658 by Étienne Mollier at 2022-07-10T15:10:51+02:00
New upstream version 3.2.5
- - - - -


30 changed files:

- + .travis.yml
- CHANGELOG.md
- setup.py
- src/pytpp/tpp_tools.py
- src/pytransit/__init__.py
- src/pytransit/analysis/__init__.py
- src/pytransit/analysis/anova.py
- src/pytransit/analysis/corrplot.py
- src/pytransit/analysis/gi.py
- src/pytransit/analysis/heatmap.py
- src/pytransit/analysis/hmm.py
- src/pytransit/analysis/pathway_enrichment.py
- src/pytransit/analysis/resampling.py
- + src/pytransit/analysis/ttnfitness.py
- src/pytransit/analysis/zinb.py
- src/pytransit/data/README.md
- + src/pytransit/data/smeg_COG_roles.dat
- src/pytransit/data/smeg_GO_terms.txt
- + src/pytransit/doc/Makefile
- + src/pytransit/doc/make.bat
- + src/pytransit/doc/source/_images/ttnfitness_coef_distribution.png
- src/pytransit/doc/source/index.rst
- + src/pytransit/doc/source/method_GI.rst
- + src/pytransit/doc/source/method_HMM.rst
- + src/pytransit/doc/source/method_Utest.rst
- + src/pytransit/doc/source/method_anova.rst
- + src/pytransit/doc/source/method_corrplot.rst
- + src/pytransit/doc/source/method_griffin.rst
- + src/pytransit/doc/source/method_gumbel.rst
- + src/pytransit/doc/source/method_heatmap.rst


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/tnseq-transit/-/commit/8f730658348137395a14c080344204422ad47559

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