[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Mon Jul 11 14:42:39 BST 2022



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
2487ac1c by Andreas Tille at 2022-07-11T13:42:33+00:00
automatic update

- - - - -


3 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,40 +1,40 @@
-Last-Update: Mon, 11 Jul 2022 01:42:03 +0000
+Last-Update: Mon, 11 Jul 2022 13:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    169 | {covid-19,imaging}                                  | 
+ dcmtk                         |    167 | {covid-19,imaging}                                  | 
  orthanc                       |     99 | {imaging,covid-19,practice}                         | 
  orthanc-wsi                   |     45 | {covid-19,imaging,his,laboratory,oncology,practice} | 
  node-shiny-server             |     44 | {covid-19,epi}                                      | 
- amide                         |     23 | {imaging}                                           | 
+ amide                         |     24 | {imaging}                                           | 
  dicomscope                    |     18 | {imaging}                                           | 
  orthanc-webviewer             |     14 | {imaging}                                           | 
+ invesalius                    |     13 | {imaging}                                           | 
  gnumed-server                 |     12 | {practice,covid-19}                                 | 
- invesalius                    |     11 | {imaging}                                           | 
  adun.app                      |      9 | {bio}                                               | 
  mrtrix3                       |      9 | {imaging}                                           | 
  pixelmed                      |      9 | {imaging}                                           | 
  orthanc-dicomweb              |      8 | {covid-19,imaging}                                  | 
- libminc                       |      7 | {imaging-dev}                                       | 
  plastimatch                   |      7 | {imaging}                                           | 
+ libminc                       |      6 | {imaging-dev}                                       | 
  librg-utils-perl              |      6 | {bio}                                               | 
  mia                           |      6 | {imaging}                                           | 
+ nipype                        |      6 | {imaging-dev,imaging}                               | 
  biojava-live                  |      5 | {bio-dev}                                           | 
- nipype                        |      5 | {imaging-dev,imaging}                               | 
  orthanc-postgresql            |      5 | {imaging}                                           | 
- salmon                        |      5 | {bio,covid-19}                                      | 
  dicompyler                    |      4 | {oncology}                                          | 
  jebl2                         |      4 | {bio-dev}                                           | 
  king                          |      4 | {typesetting,imaging}                               | 
  orthanc-gdcm                  |      4 | {imaging}                                           | 
  oscar                         |      4 | {tools,practice,data}                               | 
- staden                        |      4 | {bio}                                               | 
+ salmon                        |      4 | {bio,covid-19}                                      | 
  treeview                      |      4 | {bio,bio-phylogeny}                                 | 
  getdata                       |      3 | {bio}                                               | 
  ghmm                          |      3 | {bio}                                               | 
  piler                         |      3 | {bio}                                               | 
  pymia                         |      3 | {imaging-dev}                                       | 
  python-wdlparse               |      3 | {bio-dev}                                           | 
+ staden                        |      3 | {bio}                                               | 
  anfo                          |      2 | {cloud,bio}                                         | 
  bart-view                     |      2 | {imaging}                                           | 
  bio-tradis                    |      2 | {bio,bio-dev}                                       | 
@@ -104,7 +104,6 @@ Last-Update: Mon, 11 Jul 2022 01:42:03 +0000
  rambo-k                       |      1 | {bio}                                               | 
  rdp-alignment                 |      1 | {bio}                                               | 
  rdp-classifier                |      1 | {bio}                                               | 
- rockhopper                    |      1 | {bio}                                               | 
  rtax                          |      1 | {cloud,bio}                                         | 
  sga                           |      1 | {bio}                                               | 
  soapaligner                   |      1 | {bio}                                               | 
@@ -172,6 +171,7 @@ Last-Update: Mon, 11 Jul 2022 01:42:03 +0000
  python-seqcluster             |      0 | {bio-dev,covid-19}                                  | 
  qcumber                       |      0 | {bio}                                               | 
  resfinder-db                  |      0 | {bio}                                               | 
+ rockhopper                    |      0 | {bio}                                               | 
  sbmltoolbox                   |      0 | {bio-dev}                                           | 
  seq-gen                       |      0 | {bio}                                               | 
  sight                         |      0 | {imaging-dev}                                       | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,117 +1,117 @@
-Last-Update: Mon, 11 Jul 2022 01:42:03 +0000
+Last-Update: Mon, 11 Jul 2022 13:42:05 +0000
 
       Source                             | Vote   |                    Tasks                                                         |                                Tags                                
 -----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts                                     |   2890 | {viewing}                                                                        | 
- sympy                                   |   2057 | {physics,nanoscale-physics}                                                      | 
- armadillo                               |    183 | {mathematics-dev}                                                                | 
- python-pyqtgraph                        |    131 | {viewing}                                                                        | 
- suitesparse                             |    124 | {numericalcomputation,mathematics-dev}                                           | 
- nltk                                    |     97 | {linguistics}                                                                    | 
- atlas                                   |     95 | {mathematics-dev}                                                                | 
+ gts                                     |   2893 | {viewing}                                                                        | 
+ sympy                                   |   2067 | {physics,nanoscale-physics}                                                      | 
+ armadillo                               |    188 | {mathematics-dev}                                                                | 
+ python-pyqtgraph                        |    132 | {viewing}                                                                        | 
+ suitesparse                             |    120 | {numericalcomputation,mathematics-dev}                                           | 
+ nltk                                    |     98 | {linguistics}                                                                    | 
+ atlas                                   |     96 | {mathematics-dev}                                                                | 
  cypari2                                 |     56 | {mathematics-dev}                                                                | 
  arpack                                  |     53 | {mathematics-dev}                                                                | 
- imview                                  |     43 | {viewing}                                                                        | 
+ imview                                  |     45 | {viewing}                                                                        | 
  arduino-mk                              |     41 | {robotics}                                                                       | 
- rubiks                                  |     40 | {geometry,mathematics}                                                           | 
  fftw                                    |     39 | {mathematics-dev,physics-dev,meteorology-dev}                                    | 
- flintqs                                 |     37 | {mathematics}                                                                    | 
+ rubiks                                  |     37 | {geometry,mathematics}                                                           | 
+ flintqs                                 |     34 | {mathematics}                                                                    | 
  pyzo                                    |     27 | {numericalcomputation}                                                           | 
- sketch                                  |     24 | {typesetting}                                                                    | 
- bossa                                   |     23 | {devices}                                                                        | 
+ sketch                                  |     25 | {typesetting}                                                                    | 
  ntl                                     |     23 | {mathematics-dev}                                                                | 
- ppl                                     |     20 | {numericalcomputation}                                                           | 
- feedgnuplot                             |     19 | {viewing}                                                                        | 
- gts                                     |     19 | {viewing-dev}                                                                    | 
- guidata                                 |     19 | {dataacquisition-dev}                                                            | 
- guiqwt                                  |     19 | {numericalcomputation,viewing}                                                   | 
+ bossa                                   |     22 | {devices}                                                                        | 
+ ppl                                     |     21 | {numericalcomputation}                                                           | 
+ feedgnuplot                             |     20 | {viewing}                                                                        | 
+ guidata                                 |     20 | {dataacquisition-dev}                                                            | 
+ guiqwt                                  |     20 | {numericalcomputation,viewing}                                                   | 
  libmatio                                |     19 | {mathematics-dev}                                                                | 
- geg                                     |     18 | {viewing}                                                                        | 
+ gts                                     |     18 | {viewing-dev}                                                                    | 
  mathgl                                  |     18 | {viewing}                                                                        | 
  cernlib                                 |     17 | {highenergy-physics}                                                             | 
  fftw                                    |     17 | {physics-dev,meteorology-dev,mathematics-dev}                                    | 
  flann                                   |     17 | {mathematics-dev,engineering-dev}                                                | 
- neuron                                  |     16 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
+ geg                                     |     17 | {viewing}                                                                        | 
+ neuron                                  |     17 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
  libm4ri                                 |     15 | {mathematics-dev}                                                                | 
- ros-ros-environment                     |     14 | {robotics-dev}                                                                   | 
- coinor-symphony                         |     13 | {numericalcomputation,mathematics,logic}                                         | 
  opencascade                             |     13 | {simulations}                                                                    | 
- debian-science                          |     12 | {nanoscale-physics,mathematics,economics,physics,machine-learning}               | 
- form                                    |     12 | {mathematics}                                                                    | 
- getdp                                   |     12 | {simulations,mathematics,engineering}                                            | 
- gfsview                                 |     12 | {viewing}                                                                        | 
- opticalraytracer                        |     12 | {physics}                                                                        | 
+ ros-ros-environment                     |     13 | {robotics-dev}                                                                   | 
+ coinor-symphony                         |     12 | {numericalcomputation,mathematics,logic}                                         | 
  vitables                                |     12 | {numericalcomputation}                                                           | 
- apophenia                               |     11 | {statistics}                                                                     | 
- auto-07p                                |     11 | {mathematics}                                                                    | 
+ cliquer                                 |     11 | {mathematics}                                                                    | 
+ debian-science                          |     11 | {nanoscale-physics,mathematics,economics,physics,machine-learning}               | 
+ form                                    |     11 | {mathematics}                                                                    | 
+ getdp                                   |     11 | {simulations,mathematics,engineering}                                            | 
+ gfsview                                 |     11 | {viewing}                                                                        | 
+ jeuclid                                 |     11 | {typesetting,viewing}                                                            | 
+ opticalraytracer                        |     11 | {physics}                                                                        | 
+ apophenia                               |     10 | {statistics}                                                                     | 
+ auto-07p                                |     10 | {mathematics}                                                                    | 
  cernlib                                 |     10 | {highenergy-physics-dev}                                                         | 
- cliquer                                 |     10 | {mathematics}                                                                    | 
  debian-science                          |     10 | {neuroscience-cognitive,machine-learning}                                        | 
- debian-science                          |     10 | {economics,physics,statistics,nanoscale-physics}                                 | 
- jeuclid                                 |     10 | {typesetting,viewing}                                                            | 
  libm4rie                                |     10 | {mathematics-dev}                                                                | 
  lrcalc                                  |     10 | {mathematics-dev}                                                                | 
- matlab-support                          |     10 | {numericalcomputation,mathematics}                                               | 
  muparser                                |     10 | {mathematics-dev}                                                                | 
- polylib                                 |     10 | {mathematics}                                                                    | 
- rheolef                                 |     10 | {mathematics}                                                                    | 
+ neuron                                  |     10 | {highenergy-physics-dev}                                                         | 
  tango                                   |     10 | {dataacquisition}                                                                | 
  code-saturne                            |      9 | {engineering-dev,mathematics-dev}                                                | 
+ debian-science                          |      9 | {economics,physics,statistics,nanoscale-physics}                                 | 
  iml                                     |      9 | {mathematics-dev}                                                                | 
  libzn-poly                              |      9 | {mathematics-dev}                                                                | 
  lxi-tools                               |      9 | {engineering,dataacquisition}                                                    | 
- neuron                                  |      9 | {highenergy-physics-dev}                                                         | 
- picosat                                 |      9 | {logic}                                                                          | 
+ matlab-support                          |      9 | {numericalcomputation,mathematics}                                               | 
+ polylib                                 |      9 | {mathematics}                                                                    | 
+ rheolef                                 |      9 | {mathematics}                                                                    | 
  scram                                   |      9 | {engineering}                                                                    | 
- toulbar2                                |      9 | {numericalcomputation,physics,logic,mathematics}                                 | 
  uctodata                                |      9 | {linguistics}                                                                    | 
  cliquer                                 |      8 | {mathematics-dev}                                                                | 
  debian-science                          |      8 | {physics,nanoscale-physics,economics,machine-learning}                           | 
  ipe-tools                               |      8 | {typesetting}                                                                    | 
  libcgns                                 |      8 | {engineering}                                                                    | 
  libhomfly                               |      8 | {mathematics-dev}                                                                | 
- lrcalc                                  |      8 | {mathematics}                                                                    | 
  pcl                                     |      8 | {robotics-dev}                                                                   | 
+ picosat                                 |      8 | {logic}                                                                          | 
+ scalapack                               |      8 | {nanoscale-physics-dev}                                                          | 
  syrthes                                 |      8 | {engineering}                                                                    | 
+ toulbar2                                |      8 | {numericalcomputation,physics,logic,mathematics}                                 | 
  ucto                                    |      8 | {linguistics}                                                                    | 
  dune-uggrid                             |      7 | {mathematics-dev}                                                                | 
  gf2x                                    |      7 | {mathematics-dev}                                                                | 
  libcgns                                 |      7 | {engineering-dev}                                                                | 
- libitpp                                 |      7 | {engineering-dev,mathematics-dev}                                                | 
  libvigraimpex                           |      7 | {imageanalysis-dev,machine-learning}                                             | 
+ lrcalc                                  |      7 | {mathematics}                                                                    | 
  opencascade                             |      7 | {simulations}                                                                    | 
  python-escript                          |      7 | {simulations,numericalcomputation,engineering}                                   | 
  ros-rosconsole                          |      7 | {robotics-dev}                                                                   | 
- scalapack                               |      7 | {nanoscale-physics-dev}                                                          | 
  tango                                   |      7 | {dataacquisition}                                                                | 
  teem                                    |      7 | {imageanalysis}                                                                  | 
- urdfdom-headers                         |      7 | {robotics-dev}                                                                   | 
  coinmp                                  |      6 | {mathematics-dev,numericalcomputation,logic}                                     | 
  debian-science                          |      6 | {electrophysiology}                                                              | 
  dxsamples                               |      6 | {nanoscale-physics}                                                              | 
+ libitpp                                 |      6 | {engineering-dev,mathematics-dev}                                                | 
  libmatheval                             |      6 | {mathematics}                                                                    | 
  psurface                                |      6 | {numericalcomputation}                                                           | 
  qwtplot3d                               |      6 | {viewing-dev}                                                                    | 
  ratpoints                               |      6 | {mathematics-dev}                                                                | 
+ urdfdom-headers                         |      6 | {robotics-dev}                                                                   | 
  alberta                                 |      5 | {engineering-dev}                                                                | 
  code-saturne                            |      5 | {mathematics-dev,engineering-dev}                                                | 
  debian-science                          |      5 | {tools}                                                                          | 
  jhdf                                    |      5 | {engineering}                                                                    | 
  libgetdata                              |      5 | {dataacquisition}                                                                | 
  libmatheval                             |      5 | {mathematics-dev}                                                                | 
- morse-simulator                         |      5 | {robotics}                                                                       | 
  cernlib                                 |      4 | {highenergy-physics}                                                             | 
+ cld2                                    |      4 | {linguistics}                                                                    | 
  debian-science                          |      4 | {nanoscale-physics-dev}                                                          | 
  dxflib                                  |      4 | {engineering-dev}                                                                | 
  etsf-io                                 |      4 | {nanoscale-physics,physics}                                                      | 
  hpcc                                    |      4 | {numericalcomputation,distributedcomputing}                                      | 
  jhdf                                    |      4 | {engineering-dev}                                                                | 
  libccp4                                 |      4 | {nanoscale-physics-dev}                                                          | 
+ morse-simulator                         |      4 | {robotics}                                                                       | 
  newmat                                  |      4 | {mathematics-dev}                                                                | 
  simbody                                 |      4 | {robotics-dev}                                                                   | 
  apertium-streamparser                   |      3 | {linguistics}                                                                    | 
  apophenia                               |      3 | {statistics}                                                                     | 
- cld2                                    |      3 | {linguistics}                                                                    | 
  clipper                                 |      3 | {nanoscale-physics-dev}                                                          | 
  debian-science                          |      3 | {economics}                                                                      | 
  dimbl                                   |      3 | {linguistics}                                                                    | 
@@ -134,15 +134,16 @@ Last-Update: Mon, 11 Jul 2022 01:42:03 +0000
  cbflib                                  |      2 | {nanoscale-physics-dev}                                                          | 
  cernlib                                 |      2 | {highenergy-physics}                                                             | 
  coda                                    |      2 | {meteorology}                                                                    | 
- debian-science                          |      2 | {physics}                                                                        | 
- debian-science                          |      2 | {electrophysiology}                                                              | 
  debian-science                          |      2 | {psychophysics}                                                                  | 
+ debian-science                          |      2 | {physics}                                                                        | 
  debian-science                          |      2 | {neuroscience-cognitive}                                                         | 
+ debian-science                          |      2 | {electrophysiology}                                                              | 
  harp                                    |      2 | {meteorology}                                                                    | 
  ipe-tools                               |      2 | {typesetting}                                                                    | 
  mbtserver                               |      2 | {linguistics}                                                                    | 
  tango                                   |      2 | {dataacquisition-dev}                                                            | 
  timblserver                             |      2 | {linguistics}                                                                    | 
+ x13as                                   |      2 | {economics}                                                                      | 
  cbflib                                  |      1 | {nanoscale-physics}                                                              | 
  cernlib                                 |      1 | {highenergy-physics}                                                             | 
  cimg                                    |      1 | {imageanalysis-dev}                                                              | {x11::library}
@@ -167,7 +168,6 @@ Last-Update: Mon, 11 Jul 2022 01:42:03 +0000
  ros-opencv-apps                         |      1 | {robotics}                                                                       | 
  sparskit                                |      1 | {mathematics-dev}                                                                | 
  tamuanova                               |      1 | {statistics}                                                                     | 
- x13as                                   |      1 | {economics}                                                                      | 
  apertium-bel-rus                        |      0 | {linguistics}                                                                    | 
  apertium-hin                            |      0 | {linguistics}                                                                    | 
  apertium-mlt-ara                        |      0 | {linguistics}                                                                    | 
@@ -209,18 +209,18 @@ Last-Update: Mon, 11 Jul 2022 01:42:03 +0000
  libxsmm                                 |      0 | {mathematics-dev}                                                                | 
  looptools                               |      0 | {highenergy-physics-dev}                                                         | 
  mclibs                                  |      0 | {highenergy-physics}                                                             | 
- ompl                                    |      0 | {robotics}                                                                       | 
  ompl                                    |      0 | {robotics-dev}                                                                   | 
- openturns                               |      0 | {meteorology-dev,engineering-dev,mathematics-dev}                                | 
+ ompl                                    |      0 | {robotics}                                                                       | 
  openturns                               |      0 | {engineering-dev,meteorology-dev,mathematics-dev}                                | 
+ openturns                               |      0 | {meteorology-dev,engineering-dev,mathematics-dev}                                | 
  psurface                                |      0 | {numericalcomputation}                                                           | 
  pycollada                               |      0 | {engineering-dev}                                                                | 
  python-aws-xray-sdk                     |      0 | {dataacquisition-dev}                                                            | 
  python-escript                          |      0 | {engineering,simulations,numericalcomputation}                                   | 
  qrupdate                                |      0 | {mathematics-dev}                                                                | 
  robot-testing-framework                 |      0 | {robotics-dev}                                                                   | 
- ros-metapackages                        |      0 | {robotics-dev}                                                                   | 
  ros-metapackages                        |      0 | {robotics}                                                                       | 
+ ros-metapackages                        |      0 | {robotics-dev}                                                                   | 
  sagemath-database-combinatorial-designs |      0 | {mathematics}                                                                    | 
  sagemath-database-conway-polynomials    |      0 | {mathematics}                                                                    | 
  sagemath-database-elliptic-curves       |      0 | {mathematics}                                                                    | 
@@ -228,8 +228,8 @@ Last-Update: Mon, 11 Jul 2022 01:42:03 +0000
  sagemath-database-polytopes             |      0 | {mathematics}                                                                    | 
  siscone                                 |      0 | {highenergy-physics-dev}                                                         | 
  slicot                                  |      0 | {engineering-dev,robotics-dev}                                                   | 
- ssm                                     |      0 | {nanoscale-physics}                                                              | 
  ssm                                     |      0 | {nanoscale-physics-dev}                                                          | 
+ ssm                                     |      0 | {nanoscale-physics}                                                              | 
  tachyon                                 |      0 | {mathematics}                                                                    | 
  tango                                   |      0 | {dataacquisition}                                                                | 
  triangle                                |      0 | {physics-dev}                                                                    | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2487ac1c4d6e49b0f9ea21593bc853506c1b6fde

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View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2487ac1c4d6e49b0f9ea21593bc853506c1b6fde
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