[med-svn] [Git][med-team/sumatra][master] 8 commits: routine-update: Standards-Version: 4.6.1

[Pierre Gruet (@pgt)]

Pierre Gruet pushed to branch master at Debian Med / sumatra


Commits:
2ece5e23 by Pierre Gruet at 2022-07-12T23:26:36+02:00
routine-update: Standards-Version: 4.6.1

- - - - -
1b00f72f by Pierre Gruet at 2022-07-12T23:26:36+02:00
routine-update: debhelper-compat 13

- - - - -
3e171f4e by Pierre Gruet at 2022-07-12T23:27:03+02:00
Set upstream metadata fields: Repository-Browse.

Changes-By: lintian-brush

- - - - -
699aabd9 by Pierre Gruet at 2022-07-12T23:31:25+02:00
Using my debian.org email address

- - - - -
df4eb243 by Pierre Gruet at 2022-07-12T23:32:39+02:00
Marking the patches as Forwarded: not-needed

- - - - -
8dfa2fd2 by Pierre Gruet at 2022-07-12T23:33:12+02:00
Updating changelog

- - - - -
4f2b3f6c by Pierre Gruet at 2022-07-12T23:33:27+02:00
Set upstream metadata fields: Repository.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html

- - - - -
98779b65 by Pierre Gruet at 2022-07-13T00:15:07+02:00
Upload to unstable

- - - - -


10 changed files:

- debian/changelog
- debian/control
- debian/copyright
- debian/patches/fix_build.patch
- debian/patches/hardening.patch
- debian/patches/use_debian_packaged_sumalibs.patch
- debian/tests/alignmentIdenticalInputs
- debian/tests/alignmentOneInput
- debian/tests/alignmentTwoInputsTwoThresholds
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,8 +1,14 @@
-sumatra (1.0.36+ds-2) UNRELEASED; urgency=medium
+sumatra (1.0.36+ds-2) unstable; urgency=medium
 
+  * Standards-Version: 4.6.1 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * Set upstream metadata fields: Repository, Repository-Browse.
+  * Marking the patches as Forwarded: not-needed
+
+  [ Andreas Tille ]
   * Remove some cruft from upstream tarball
 
- -- Andreas Tille <tille at debian.org>  Mon, 20 Apr 2020 12:48:57 +0200
+ -- Pierre Gruet <pgt at debian.org>  Tue, 12 Jul 2022 23:33:51 +0200
 
 sumatra (1.0.36+ds-1) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -2,13 +2,13 @@ Source: sumatra
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Tim Booth <tbooth at ceh.ac.uk>,
            Andreas Tille <tille at debian.org>,
-           Pierre Gruet <pgtdebian at free.fr>
+           Pierre Gruet <pgt at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper-compat (= 12),
+Build-Depends: debhelper-compat (= 13),
                libsuma-dev,
                zlib1g-dev
-Standards-Version: 4.5.0
+Standards-Version: 4.6.1
 Vcs-Browser: https://salsa.debian.org/med-team/sumatra
 Vcs-Git: https://salsa.debian.org/med-team/sumatra.git
 Homepage: http://metabarcoding.org/sumatra


=====================================
debian/copyright
=====================================
@@ -14,7 +14,7 @@ License: CeCILL-2
 Files: debian/*
 Copyright: 2015 Tim Booth <tbooth at ceh.ac.uk>
            2015 Andreas Tille <tille at debian.org>
-           2020 Pierre Gruet <pgtdebian at free.fr>
+           2020-2022 Pierre Gruet <pgt at debian.org>
 License: CeCILL-2
 
 License: CeCILL-2


=====================================
debian/patches/fix_build.patch
=====================================
@@ -1,6 +1,7 @@
 Description: Providing -g flag to the compiler
-Author: Pierre Gruet <pgtdebian at free.fr>
-Last-Update: 2020-04-13
+Author: Pierre Gruet <pgt at debian.org>
+Forwarded: not-needed
+Last-Update: 2022-07-12
 
 --- a/global.mk
 +++ b/global.mk


=====================================
debian/patches/hardening.patch
=====================================
@@ -1,5 +1,6 @@
 Author: Andreas Tille <tille at debian.org>
 Last-Update: Wed, 05 Aug 2015 17:54:58 +0200
+Forwarded: not-needed
 Description: Propagate hardening options
 
 --- a/global.mk


=====================================
debian/patches/use_debian_packaged_sumalibs.patch
=====================================
@@ -1,5 +1,6 @@
 Author: Andreas Tille <tille at debian.org>
 Last-Update: Thu, 09 Apr 2020 14:06:08 +0200
+Forwarded: not-needed
 Description: Build using Debian packaged libsuma
 
 --- a/Makefile


=====================================
debian/tests/alignmentIdenticalInputs
=====================================
@@ -4,7 +4,7 @@
 # * 3 sequences are read in each one;
 # * 5 lines are output with a score of 1.
 # (C) 2020 Pierre Gruet.
-# Author: Pierre Gruet <pgtdebian at free.fr>
+# Author: Pierre Gruet <pgt at debian.org>
 
 set -e
 


=====================================
debian/tests/alignmentOneInput
=====================================
@@ -6,7 +6,7 @@
 # * 3 lines are output with a threshold of 0.5;
 # * 1 line is output with a threshold of 1.
 # (C) 2020 Pierre Gruet.
-# Author: Pierre Gruet <pgtdebian at free.fr>
+# Author: Pierre Gruet <pgt at debian.org>
 
 set -e
 


=====================================
debian/tests/alignmentTwoInputsTwoThresholds
=====================================
@@ -5,7 +5,7 @@
 # * 5 lines are output if the threshold is 0.7;
 # * 3 lines are output if the threshold is 0.8.
 # (C) 2020 Pierre Gruet.
-# Author: Pierre Gruet <pgtdebian at free.fr>
+# Author: Pierre Gruet <pgt at debian.org>
 
 set -e
 


=====================================
debian/upstream/metadata
=====================================
@@ -9,3 +9,5 @@ Registry:
    Entry: NA
  - Name: conda:bioconda
    Entry: NA
+Repository: https://github.com/mesocentrefc/sumatra.git
+Repository-Browse: https://github.com/mesocentrefc/sumatra



View it on GitLab: https://salsa.debian.org/med-team/sumatra/-/compare/6bfe7fc8e3b10099e96a1168a87faa31fc1db82c...98779b65b1679719ed10adf9f8eb9d5dc1f49e9a

-- 
View it on GitLab: https://salsa.debian.org/med-team/sumatra/-/compare/6bfe7fc8e3b10099e96a1168a87faa31fc1db82c...98779b65b1679719ed10adf9f8eb9d5dc1f49e9a
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