Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
5d151f66 by Andreas Tille at 2022-07-16T13:42:31+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,24 +1,24 @@
-Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
+Last-Update: Sat, 16 Jul 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 173 | {covid-19,imaging} |
- orthanc | 98 | {imaging,covid-19,practice} |
- orthanc-wsi | 45 | {covid-19,imaging,his,laboratory,oncology,practice} |
- node-shiny-server | 43 | {covid-19,epi} |
+ dcmtk | 175 | {covid-19,imaging} |
+ orthanc | 100 | {imaging,covid-19,practice} |
+ orthanc-wsi | 47 | {covid-19,imaging,his,laboratory,oncology,practice} |
+ node-shiny-server | 42 | {covid-19,epi} |
amide | 31 | {imaging} |
dicomscope | 18 | {imaging} |
- invesalius | 15 | {imaging} |
+ invesalius | 16 | {imaging} |
orthanc-webviewer | 14 | {imaging} |
gnumed-server | 12 | {practice,covid-19} |
mrtrix3 | 11 | {imaging} |
adun.app | 9 | {bio} |
orthanc-dicomweb | 9 | {covid-19,imaging} |
pixelmed | 8 | {imaging} |
+ plastimatch | 8 | {imaging} |
librg-utils-perl | 7 | {bio} |
- plastimatch | 7 | {imaging} |
+ nipype | 7 | {imaging-dev,imaging} |
mia | 6 | {imaging} |
- nipype | 6 | {imaging-dev,imaging} |
biojava-live | 5 | {bio-dev} |
ghmm | 5 | {bio} |
king | 5 | {typesetting,imaging} |
@@ -37,9 +37,8 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
libncl | 3 | {bio} |
libsbml | 3 | {bio-dev} |
piler | 3 | {bio} |
- pymia | 3 | {imaging-dev} |
+ python-wdlparse | 3 | {bio-dev} |
sift | 3 | {bio} |
- stacks | 3 | {bio} |
staden | 3 | {bio} |
anfo | 2 | {cloud,bio} |
bart-view | 2 | {imaging} |
@@ -57,16 +56,16 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
melting | 2 | {bio,cloud} |
opencfu | 2 | {laboratory} |
orthanc-mysql | 2 | {imaging} |
- papyrus | 2 | {imaging-dev} |
phyutility | 2 | {bio,cloud} |
placnet | 2 | {bio} |
- python-wdlparse | 2 | {bio-dev} |
+ pymia | 2 | {imaging-dev} |
rdp-alignment | 2 | {bio} |
runcircos-gui | 2 | {bio} |
saint | 2 | {bio} |
sibsim4 | 2 | {cloud,bio} |
skesa | 2 | {bio} |
spread-phy | 2 | {bio,bio-phylogeny} |
+ stacks | 2 | {bio} |
surankco | 2 | {bio} |
tophat-recondition | 2 | {covid-19,bio} |
tracetuner | 2 | {bio} |
@@ -90,13 +89,13 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
libbio-mage-utils-perl | 1 | {bio-dev} |
libdivsufsort | 1 | {bio-dev} |
libgenome | 1 | {bio-dev} |
- libhmsbeagle | 1 | {bio-dev} |
libpal-java | 1 | {bio-dev} |
librdp-taxonomy-tree-java | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
metaphlan2 | 1 | {bio} |
mhap | 1 | {bio,bio-ngs} |
orthanc-python | 1 | {covid-19} |
+ papyrus | 1 | {imaging-dev} |
pigx-rnaseq | 1 | {bio,covid-19} |
pique | 1 | {bio} |
plasmidseeker | 1 | {bio} |
@@ -143,6 +142,7 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
libchado-perl | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
libgkarrays | 0 | {bio-dev} |
+ libhmsbeagle | 0 | {bio-dev} |
libics | 0 | {imaging-dev,covid-19} |
libjloda-java | 0 | {bio-dev} |
libmems | 0 | {bio-dev} |
@@ -171,7 +171,6 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {bio-dev,covid-19} |
resfinder-db | 0 | {bio} |
- rockhopper | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
sight | 0 | {imaging-dev} |
@@ -183,5 +182,5 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
xxsds-dynamic | 0 | {bio-dev} |
libmaus2 | -1 | {bio-dev,covid-19} |
mssstest | -1 | {tools} |
-(211 rows)
+(210 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,106 +1,107 @@
-Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
+Last-Update: Sat, 16 Jul 2022 13:42:05 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 2923 | {viewing} |
- sympy | 2011 | {physics,nanoscale-physics} |
- armadillo | 189 | {mathematics-dev} |
- python-pyqtgraph | 129 | {viewing} |
+ gts | 2915 | {viewing} |
+ sympy | 1994 | {physics,nanoscale-physics} |
+ armadillo | 186 | {mathematics-dev} |
+ python-pyqtgraph | 125 | {viewing} |
suitesparse | 123 | {numericalcomputation,mathematics-dev} |
- atlas | 99 | {mathematics-dev} |
- nltk | 95 | {linguistics} |
- arpack | 59 | {mathematics-dev} |
- cypari2 | 51 | {mathematics-dev} |
- imview | 45 | {viewing} |
+ atlas | 97 | {mathematics-dev} |
+ nltk | 92 | {linguistics} |
+ arpack | 58 | {mathematics-dev} |
+ cypari2 | 50 | {mathematics-dev} |
+ imview | 44 | {viewing} |
fftw | 41 | {mathematics-dev,physics-dev,meteorology-dev} |
arduino-mk | 39 | {robotics} |
rubiks | 34 | {geometry,mathematics} |
- flintqs | 31 | {mathematics} |
- pyzo | 26 | {numericalcomputation} |
+ flintqs | 32 | {mathematics} |
sketch | 26 | {typesetting} |
+ pyzo | 25 | {numericalcomputation} |
bossa | 23 | {devices} |
- feedgnuplot | 21 | {viewing} |
+ cernlib | 21 | {highenergy-physics} |
ntl | 21 | {mathematics-dev} |
ppl | 21 | {numericalcomputation} |
- cernlib | 20 | {highenergy-physics} |
+ feedgnuplot | 20 | {viewing} |
gts | 20 | {viewing-dev} |
- flann | 19 | {mathematics-dev,engineering-dev} |
guidata | 19 | {dataacquisition-dev} |
guiqwt | 19 | {numericalcomputation,viewing} |
+ neuron | 19 | {neuroscience-modeling,highenergy-physics,simulations} |
+ flann | 18 | {mathematics-dev,engineering-dev} |
geg | 18 | {viewing} |
- libmatio | 18 | {mathematics-dev} |
+ mathgl | 18 | {viewing} |
fftw | 17 | {physics-dev,meteorology-dev,mathematics-dev} |
- mathgl | 17 | {viewing} |
- neuron | 17 | {neuroscience-modeling,highenergy-physics,simulations} |
+ libmatio | 17 | {mathematics-dev} |
+ opencascade | 14 | {simulations} |
cernlib | 13 | {highenergy-physics-dev} |
coinor-symphony | 13 | {numericalcomputation,mathematics,logic} |
- opencascade | 13 | {simulations} |
- ros-ros-environment | 13 | {robotics-dev} |
+ muparser | 13 | {mathematics-dev} |
vitables | 13 | {numericalcomputation} |
libm4ri | 12 | {mathematics-dev} |
- muparser | 12 | {mathematics-dev} |
opticalraytracer | 12 | {physics} |
+ ros-ros-environment | 12 | {robotics-dev} |
+ debian-science | 11 | {nanoscale-physics,mathematics,economics,physics,machine-learning} |
form | 11 | {mathematics} |
getdp | 11 | {simulations,mathematics,engineering} |
gfsview | 11 | {viewing} |
+ neuron | 11 | {highenergy-physics-dev} |
apophenia | 10 | {statistics} |
cliquer | 10 | {mathematics} |
- debian-science | 10 | {nanoscale-physics,mathematics,economics,physics,machine-learning} |
jeuclid | 10 | {typesetting,viewing} |
- neuron | 10 | {highenergy-physics-dev} |
+ lxi-tools | 10 | {engineering,dataacquisition} |
picosat | 10 | {logic} |
scalapack | 10 | {nanoscale-physics-dev} |
auto-07p | 9 | {mathematics} |
code-saturne | 9 | {engineering-dev,mathematics-dev} |
+ debian-science | 9 | {neuroscience-cognitive,machine-learning} |
+ debian-science | 9 | {economics,physics,statistics,nanoscale-physics} |
debian-science | 9 | {physics,nanoscale-physics,economics,machine-learning} |
dune-uggrid | 9 | {mathematics-dev} |
- lxi-tools | 9 | {engineering,dataacquisition} |
pcl | 9 | {robotics-dev} |
+ polylib | 9 | {mathematics} |
+ scram | 9 | {engineering} |
tango | 9 | {dataacquisition} |
- debian-science | 8 | {neuroscience-cognitive,machine-learning} |
- debian-science | 8 | {economics,physics,statistics,nanoscale-physics} |
+ teem | 9 | {imageanalysis} |
+ toulbar2 | 9 | {numericalcomputation,physics,logic,mathematics} |
ipe-tools | 8 | {typesetting} |
libcgns | 8 | {engineering} |
libitpp | 8 | {engineering-dev,mathematics-dev} |
+ libvigraimpex | 8 | {imageanalysis-dev,machine-learning} |
lrcalc | 8 | {mathematics-dev} |
matlab-support | 8 | {numericalcomputation,mathematics} |
- polylib | 8 | {mathematics} |
- scram | 8 | {engineering} |
- teem | 8 | {imageanalysis} |
- toulbar2 | 8 | {numericalcomputation,physics,logic,mathematics} |
+ python-escript | 8 | {simulations,numericalcomputation,engineering} |
+ syrthes | 8 | {engineering} |
uctodata | 8 | {linguistics} |
- coinmp | 7 | {mathematics-dev,numericalcomputation,logic} |
iml | 7 | {mathematics-dev} |
libcgns | 7 | {engineering-dev} |
libm4rie | 7 | {mathematics-dev} |
- libvigraimpex | 7 | {imageanalysis-dev,machine-learning} |
libzn-poly | 7 | {mathematics-dev} |
+ lrcalc | 7 | {mathematics} |
+ opencascade | 7 | {simulations} |
psurface | 7 | {numericalcomputation} |
- python-escript | 7 | {simulations,numericalcomputation,engineering} |
- syrthes | 7 | {engineering} |
+ rheolef | 7 | {mathematics} |
ucto | 7 | {linguistics} |
alberta | 6 | {engineering-dev} |
cliquer | 6 | {mathematics-dev} |
+ coinmp | 6 | {mathematics-dev,numericalcomputation,logic} |
debian-science | 6 | {electrophysiology} |
dxsamples | 6 | {nanoscale-physics} |
gf2x | 6 | {mathematics-dev} |
libhomfly | 6 | {mathematics-dev} |
libmatheval | 6 | {mathematics} |
- lrcalc | 6 | {mathematics} |
- opencascade | 6 | {simulations} |
qwtplot3d | 6 | {viewing-dev} |
ratpoints | 6 | {mathematics-dev} |
- rheolef | 6 | {mathematics} |
ros-rosconsole | 6 | {robotics-dev} |
tango | 6 | {dataacquisition} |
code-saturne | 5 | {mathematics-dev,engineering-dev} |
+ debian-science | 5 | {tools} |
libgetdata | 5 | {dataacquisition} |
libmatheval | 5 | {mathematics-dev} |
morse-simulator | 5 | {robotics} |
+ urdfdom-headers | 5 | {robotics-dev} |
cernlib | 4 | {highenergy-physics} |
cld2 | 4 | {linguistics} |
debian-science | 4 | {nanoscale-physics-dev} |
- debian-science | 4 | {tools} |
dune-istl | 4 | {mathematics-dev} |
dxflib | 4 | {engineering-dev} |
etsf-io | 4 | {nanoscale-physics,physics} |
@@ -108,12 +109,11 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
newmat | 4 | {mathematics-dev} |
openstereogram | 4 | {tools} |
simbody | 4 | {robotics-dev} |
- urdfdom-headers | 4 | {robotics-dev} |
apertium-streamparser | 3 | {linguistics} |
clipper | 3 | {nanoscale-physics-dev} |
- debian-science | 3 | {neuroscience-cognitive} |
- debian-science | 3 | {economics} |
debian-science | 3 | {psychophysics} |
+ debian-science | 3 | {economics} |
+ debian-science | 3 | {neuroscience-cognitive} |
dimbl | 3 | {linguistics} |
frog | 3 | {linguistics} |
hpcc | 3 | {numericalcomputation,distributedcomputing} |
@@ -124,7 +124,6 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
libgtkdatabox | 3 | {engineering-dev,viewing-dev} |
looptools | 3 | {highenergy-physics} |
mbt | 3 | {linguistics} |
- mrmpi | 3 | {tools} |
openmx | 3 | {nanoscale-physics,physics} |
qd | 3 | {mathematics-dev} |
sac2mseed | 3 | {geography} |
@@ -135,14 +134,15 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
cbflib | 2 | {nanoscale-physics-dev} |
cernlib | 2 | {highenergy-physics} |
coda | 2 | {meteorology} |
- debian-science | 2 | {electrophysiology} |
debian-science | 2 | {physics} |
+ debian-science | 2 | {electrophysiology} |
dune-localfunctions | 2 | {mathematics-dev} |
gemmlowp | 2 | {mathematics-dev} |
harp | 2 | {meteorology} |
ipe-tools | 2 | {typesetting} |
liblbfgs | 2 | {mathematics-dev} |
mbtserver | 2 | {linguistics} |
+ mrmpi | 2 | {tools} |
openctm | 2 | {physics-dev} |
openturns | 2 | {meteorology-dev,mathematics-dev,statistics,engineering,mathematics,meteorology} |
ros-opencv-apps | 2 | {robotics} |
@@ -183,8 +183,8 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
calculix-ccx-doc | 0 | {numericalcomputation,engineering,simulations} |
calculix-ccx-test | 0 | {engineering,simulations,numericalcomputation} |
cernlib | 0 | {highenergy-physics-dev} |
- cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {physics,highenergy-physics} |
+ cernlib | 0 | {highenergy-physics} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -219,8 +219,8 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
python-escript | 0 | {engineering,simulations,numericalcomputation} |
qrupdate | 0 | {mathematics-dev} |
robot-testing-framework | 0 | {robotics-dev} |
- ros-metapackages | 0 | {robotics} |
ros-metapackages | 0 | {robotics-dev} |
+ ros-metapackages | 0 | {robotics} |
sagemath-database-combinatorial-designs | 0 | {mathematics} |
sagemath-database-conway-polynomials | 0 | {mathematics} |
sagemath-database-elliptic-curves | 0 | {mathematics} |
@@ -228,8 +228,8 @@ Last-Update: Sat, 16 Jul 2022 01:42:04 +0000
sagemath-database-polytopes | 0 | {mathematics} |
siscone | 0 | {highenergy-physics-dev} |
slicot | 0 | {engineering-dev,robotics-dev} |
- ssm | 0 | {nanoscale-physics-dev} |
ssm | 0 | {nanoscale-physics} |
+ ssm | 0 | {nanoscale-physics-dev} |
tachyon | 0 | {mathematics} |
tango | 0 | {dataacquisition} |
triangle | 0 | {physics-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5d151f66c4cfb58c3c402ad6f22e5044ec5bcbee
--
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