Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
066fe736 by Andreas Tille at 2022-07-17T13:42:40+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,13 +1,13 @@
-Last-Update: Sun, 17 Jul 2022 01:42:03 +0000
+Last-Update: Sun, 17 Jul 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 175 | {covid-19,imaging} |
- orthanc | 100 | {imaging,covid-19,practice} |
+ dcmtk | 177 | {covid-19,imaging} |
+ orthanc | 101 | {imaging,covid-19,practice} |
orthanc-wsi | 47 | {covid-19,imaging,his,laboratory,oncology,practice} |
- node-shiny-server | 42 | {covid-19,epi} |
+ node-shiny-server | 39 | {covid-19,epi} |
amide | 31 | {imaging} |
- dicomscope | 18 | {imaging} |
+ dicomscope | 19 | {imaging} |
invesalius | 16 | {imaging} |
orthanc-webviewer | 14 | {imaging} |
gnumed-server | 12 | {practice,covid-19} |
@@ -24,32 +24,27 @@ Last-Update: Sun, 17 Jul 2022 01:42:03 +0000
king | 5 | {typesetting,imaging} |
libminc | 5 | {imaging-dev} |
orthanc-postgresql | 5 | {imaging} |
- salmon | 5 | {bio,covid-19} |
dicompyler | 4 | {oncology} |
jebl2 | 4 | {bio-dev} |
obitools | 4 | {bio} |
orthanc-gdcm | 4 | {imaging} |
- oscar | 4 | {tools,practice,data} |
+ python-wdlparse | 4 | {bio-dev} |
+ salmon | 4 | {bio,covid-19} |
treeview | 4 | {bio,bio-phylogeny} |
- bio-tradis | 3 | {bio,bio-dev} |
blimps | 3 | {bio} |
getdata | 3 | {bio} |
libncl | 3 | {bio} |
libsbml | 3 | {bio-dev} |
+ oscar | 3 | {tools,practice,data} |
piler | 3 | {bio} |
- python-wdlparse | 3 | {bio-dev} |
+ pymia | 3 | {imaging-dev} |
sift | 3 | {bio} |
staden | 3 | {bio} |
- anfo | 2 | {cloud,bio} |
bart-view | 2 | {imaging} |
- bitseq | 2 | {bio} |
- cat-bat | 2 | {covid-19,bio} |
- clonalorigin | 2 | {bio} |
+ bio-tradis | 2 | {bio,bio-dev} |
cmtk | 2 | {imaging} |
- dextractor | 2 | {covid-19,bio} |
elastix | 2 | {imaging} |
embassy-domainatrix | 2 | {bio,cloud} |
- emmax | 2 | {bio} |
gatb-core | 2 | {bio} |
lamarc | 2 | {bio} |
mauve-aligner | 2 | {bio} |
@@ -58,7 +53,6 @@ Last-Update: Sun, 17 Jul 2022 01:42:03 +0000
orthanc-mysql | 2 | {imaging} |
phyutility | 2 | {bio,cloud} |
placnet | 2 | {bio} |
- pymia | 2 | {imaging-dev} |
rdp-alignment | 2 | {bio} |
runcircos-gui | 2 | {bio} |
saint | 2 | {bio} |
@@ -71,17 +65,15 @@ Last-Update: Sun, 17 Jul 2022 01:42:03 +0000
tracetuner | 2 | {bio} |
tvc | 2 | {bio} |
acedb | 1 | {bio,cloud} |
- arden | 1 | {bio,cloud} |
- assemblytics | 1 | {bio} |
- beast-mcmc | 1 | {bio,bio-phylogeny} |
- brig | 1 | {bio} |
- canu | 1 | {bio} |
- clonalframeml | 1 | {covid-19,bio} |
+ anfo | 1 | {cloud,bio} |
+ bitseq | 1 | {bio} |
+ cat-bat | 1 | {covid-19,bio} |
+ clonalorigin | 1 | {bio} |
ctn | 1 | {imaging-dev} |
- delly | 1 | {bio,covid-19} |
+ dextractor | 1 | {covid-19,bio} |
embassy-domsearch | 1 | {bio,cloud} |
+ emmax | 1 | {bio} |
emperor | 1 | {bio} |
- fastml | 1 | {bio} |
hinge | 1 | {bio} |
ipig | 1 | {bio} |
jmodeltest | 1 | {bio-phylogeny,bio} |
@@ -117,15 +109,23 @@ Last-Update: Sun, 17 Jul 2022 01:42:03 +0000
varscan | 1 | {bio,covid-19} |
vienna-rna | 1 | {bio,covid-19} |
zalign | 1 | {cloud,bio} |
+ arden | 0 | {bio,cloud} |
+ assemblytics | 0 | {bio} |
bambamc | 0 | {bio-dev} |
+ beast-mcmc | 0 | {bio,bio-phylogeny} |
biojava4-live | 0 | {bio-dev} |
biosyntax | 0 | {bio} |
+ brig | 0 | {bio} |
camp | 0 | {imaging-dev} |
+ canu | 0 | {bio} |
+ clonalframeml | 0 | {covid-19,bio} |
cufflinks | 0 | {cloud,bio} |
cutesv | 0 | {bio} |
+ delly | 0 | {bio,covid-19} |
eegdev | 0 | {imaging-dev} |
embassy-domalign | 0 | {bio,cloud} |
emboss-explorer | 0 | {bio} |
+ fastml | 0 | {bio} |
fis-gtm | 0 | {his} |
gatb-core | 0 | {bio-dev} |
htscodecs | 0 | {bio-dev,covid-19} |
@@ -168,8 +168,8 @@ Last-Update: Sun, 17 Jul 2022 01:42:03 +0000
pbseqlib | 0 | {bio-dev} |
plasmidid | 0 | {bio,covid-19} |
provean | 0 | {bio} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {bio-dev,covid-19} |
+ python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,120 +1,120 @@
-Last-Update: Sun, 17 Jul 2022 01:42:04 +0000
+Last-Update: Sun, 17 Jul 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
gts | 2915 | {viewing} |
- sympy | 1994 | {physics,nanoscale-physics} |
- armadillo | 186 | {mathematics-dev} |
- python-pyqtgraph | 125 | {viewing} |
- suitesparse | 123 | {numericalcomputation,mathematics-dev} |
- atlas | 97 | {mathematics-dev} |
+ sympy | 1973 | {physics,nanoscale-physics} |
+ armadillo | 183 | {mathematics-dev} |
+ python-pyqtgraph | 128 | {viewing} |
+ suitesparse | 124 | {numericalcomputation,mathematics-dev} |
+ atlas | 98 | {mathematics-dev} |
nltk | 92 | {linguistics} |
arpack | 58 | {mathematics-dev} |
- cypari2 | 50 | {mathematics-dev} |
+ cypari2 | 49 | {mathematics-dev} |
imview | 44 | {viewing} |
- fftw | 41 | {mathematics-dev,physics-dev,meteorology-dev} |
arduino-mk | 39 | {robotics} |
- rubiks | 34 | {geometry,mathematics} |
- flintqs | 32 | {mathematics} |
- sketch | 26 | {typesetting} |
+ fftw | 39 | {mathematics-dev,physics-dev,meteorology-dev} |
+ rubiks | 36 | {geometry,mathematics} |
+ flintqs | 33 | {mathematics} |
+ sketch | 27 | {typesetting} |
pyzo | 25 | {numericalcomputation} |
bossa | 23 | {devices} |
cernlib | 21 | {highenergy-physics} |
- ntl | 21 | {mathematics-dev} |
- ppl | 21 | {numericalcomputation} |
- feedgnuplot | 20 | {viewing} |
gts | 20 | {viewing-dev} |
- guidata | 19 | {dataacquisition-dev} |
- guiqwt | 19 | {numericalcomputation,viewing} |
+ guidata | 20 | {dataacquisition-dev} |
+ guiqwt | 20 | {numericalcomputation,viewing} |
+ ntl | 20 | {mathematics-dev} |
+ ppl | 20 | {numericalcomputation} |
+ feedgnuplot | 19 | {viewing} |
+ geg | 19 | {viewing} |
neuron | 19 | {neuroscience-modeling,highenergy-physics,simulations} |
flann | 18 | {mathematics-dev,engineering-dev} |
- geg | 18 | {viewing} |
- mathgl | 18 | {viewing} |
fftw | 17 | {physics-dev,meteorology-dev,mathematics-dev} |
libmatio | 17 | {mathematics-dev} |
+ mathgl | 17 | {viewing} |
opencascade | 14 | {simulations} |
cernlib | 13 | {highenergy-physics-dev} |
- coinor-symphony | 13 | {numericalcomputation,mathematics,logic} |
muparser | 13 | {mathematics-dev} |
vitables | 13 | {numericalcomputation} |
- libm4ri | 12 | {mathematics-dev} |
+ coinor-symphony | 12 | {numericalcomputation,mathematics,logic} |
+ getdp | 12 | {simulations,mathematics,engineering} |
opticalraytracer | 12 | {physics} |
ros-ros-environment | 12 | {robotics-dev} |
debian-science | 11 | {nanoscale-physics,mathematics,economics,physics,machine-learning} |
form | 11 | {mathematics} |
- getdp | 11 | {simulations,mathematics,engineering} |
gfsview | 11 | {viewing} |
+ libm4ri | 11 | {mathematics-dev} |
neuron | 11 | {highenergy-physics-dev} |
- apophenia | 10 | {statistics} |
- cliquer | 10 | {mathematics} |
+ scalapack | 11 | {nanoscale-physics-dev} |
+ dune-uggrid | 10 | {mathematics-dev} |
jeuclid | 10 | {typesetting,viewing} |
lxi-tools | 10 | {engineering,dataacquisition} |
picosat | 10 | {logic} |
- scalapack | 10 | {nanoscale-physics-dev} |
- auto-07p | 9 | {mathematics} |
+ apophenia | 9 | {statistics} |
+ cliquer | 9 | {mathematics} |
code-saturne | 9 | {engineering-dev,mathematics-dev} |
+ debian-science | 9 | {physics,nanoscale-physics,economics,machine-learning} |
debian-science | 9 | {neuroscience-cognitive,machine-learning} |
debian-science | 9 | {economics,physics,statistics,nanoscale-physics} |
- debian-science | 9 | {physics,nanoscale-physics,economics,machine-learning} |
- dune-uggrid | 9 | {mathematics-dev} |
+ matlab-support | 9 | {numericalcomputation,mathematics} |
pcl | 9 | {robotics-dev} |
polylib | 9 | {mathematics} |
scram | 9 | {engineering} |
tango | 9 | {dataacquisition} |
teem | 9 | {imageanalysis} |
toulbar2 | 9 | {numericalcomputation,physics,logic,mathematics} |
+ auto-07p | 8 | {mathematics} |
ipe-tools | 8 | {typesetting} |
libcgns | 8 | {engineering} |
libitpp | 8 | {engineering-dev,mathematics-dev} |
- libvigraimpex | 8 | {imageanalysis-dev,machine-learning} |
- lrcalc | 8 | {mathematics-dev} |
- matlab-support | 8 | {numericalcomputation,mathematics} |
python-escript | 8 | {simulations,numericalcomputation,engineering} |
syrthes | 8 | {engineering} |
uctodata | 8 | {linguistics} |
- iml | 7 | {mathematics-dev} |
+ alberta | 7 | {engineering-dev} |
libcgns | 7 | {engineering-dev} |
- libm4rie | 7 | {mathematics-dev} |
- libzn-poly | 7 | {mathematics-dev} |
+ libvigraimpex | 7 | {imageanalysis-dev,machine-learning} |
+ lrcalc | 7 | {mathematics-dev} |
lrcalc | 7 | {mathematics} |
opencascade | 7 | {simulations} |
psurface | 7 | {numericalcomputation} |
rheolef | 7 | {mathematics} |
ucto | 7 | {linguistics} |
- alberta | 6 | {engineering-dev} |
- cliquer | 6 | {mathematics-dev} |
- coinmp | 6 | {mathematics-dev,numericalcomputation,logic} |
debian-science | 6 | {electrophysiology} |
dxsamples | 6 | {nanoscale-physics} |
- gf2x | 6 | {mathematics-dev} |
- libhomfly | 6 | {mathematics-dev} |
+ iml | 6 | {mathematics-dev} |
+ libm4rie | 6 | {mathematics-dev} |
libmatheval | 6 | {mathematics} |
- qwtplot3d | 6 | {viewing-dev} |
- ratpoints | 6 | {mathematics-dev} |
- ros-rosconsole | 6 | {robotics-dev} |
- tango | 6 | {dataacquisition} |
+ libzn-poly | 6 | {mathematics-dev} |
+ cliquer | 5 | {mathematics-dev} |
code-saturne | 5 | {mathematics-dev,engineering-dev} |
+ coinmp | 5 | {mathematics-dev,numericalcomputation,logic} |
debian-science | 5 | {tools} |
+ dune-istl | 5 | {mathematics-dev} |
+ gf2x | 5 | {mathematics-dev} |
libgetdata | 5 | {dataacquisition} |
+ libhomfly | 5 | {mathematics-dev} |
libmatheval | 5 | {mathematics-dev} |
morse-simulator | 5 | {robotics} |
+ qwtplot3d | 5 | {viewing-dev} |
+ ratpoints | 5 | {mathematics-dev} |
+ ros-rosconsole | 5 | {robotics-dev} |
+ tango | 5 | {dataacquisition} |
urdfdom-headers | 5 | {robotics-dev} |
cernlib | 4 | {highenergy-physics} |
- cld2 | 4 | {linguistics} |
debian-science | 4 | {nanoscale-physics-dev} |
- dune-istl | 4 | {mathematics-dev} |
- dxflib | 4 | {engineering-dev} |
etsf-io | 4 | {nanoscale-physics,physics} |
jhdf | 4 | {engineering} |
newmat | 4 | {mathematics-dev} |
openstereogram | 4 | {tools} |
simbody | 4 | {robotics-dev} |
- apertium-streamparser | 3 | {linguistics} |
+ taurus | 4 | {dataacquisition} |
+ cld2 | 3 | {linguistics} |
clipper | 3 | {nanoscale-physics-dev} |
- debian-science | 3 | {psychophysics} |
- debian-science | 3 | {economics} |
debian-science | 3 | {neuroscience-cognitive} |
- dimbl | 3 | {linguistics} |
+ debian-science | 3 | {economics} |
+ debian-science | 3 | {psychophysics} |
+ dune-localfunctions | 3 | {mathematics-dev} |
+ dxflib | 3 | {engineering-dev} |
frog | 3 | {linguistics} |
hpcc | 3 | {numericalcomputation,distributedcomputing} |
irstlm | 3 | {linguistics} |
@@ -128,15 +128,15 @@ Last-Update: Sun, 17 Jul 2022 01:42:04 +0000
qd | 3 | {mathematics-dev} |
sac2mseed | 3 | {geography} |
sardana | 3 | {dataacquisition} |
- taurus | 3 | {dataacquisition} |
timbl | 3 | {linguistics} |
+ x13as | 3 | {economics} |
+ apertium-streamparser | 2 | {linguistics} |
apophenia | 2 | {statistics} |
cbflib | 2 | {nanoscale-physics-dev} |
cernlib | 2 | {highenergy-physics} |
- coda | 2 | {meteorology} |
- debian-science | 2 | {physics} |
debian-science | 2 | {electrophysiology} |
- dune-localfunctions | 2 | {mathematics-dev} |
+ debian-science | 2 | {physics} |
+ dimbl | 2 | {linguistics} |
gemmlowp | 2 | {mathematics-dev} |
harp | 2 | {meteorology} |
ipe-tools | 2 | {typesetting} |
@@ -148,17 +148,20 @@ Last-Update: Sun, 17 Jul 2022 01:42:04 +0000
ros-opencv-apps | 2 | {robotics} |
sparskit | 2 | {mathematics-dev} |
timblserver | 2 | {linguistics} |
- x13as | 2 | {economics} |
cbflib | 1 | {nanoscale-physics} |
cernlib | 1 | {highenergy-physics} |
cimg | 1 | {imageanalysis-dev} | {x11::library}
+ coda | 1 | {meteorology} |
coda | 1 | {meteorology-dev} |
cqrlib | 1 | {mathematics-dev} |
cvector | 1 | {mathematics-dev} |
+ dune-functions | 1 | {mathematics-dev} |
+ dune-typetree | 1 | {mathematics-dev} |
fastjet | 1 | {highenergy-physics-dev} |
itsol | 1 | {mathematics-dev} |
libgetdata | 1 | {dataacquisition-dev} |
liborigin2 | 1 | {viewing-dev} |
+ libvigraimpex | 1 | {imageanalysis-dev,machine-learning} |
looptools | 1 | {highenergy-physics-dev} |
metis-edf | 1 | {engineering,numericalcomputation} |
neartree | 1 | {mathematics-dev,numericalcomputation} |
@@ -182,18 +185,16 @@ Last-Update: Sun, 17 Jul 2022 01:42:04 +0000
asl | 0 | {physics-dev} |
calculix-ccx-doc | 0 | {numericalcomputation,engineering,simulations} |
calculix-ccx-test | 0 | {engineering,simulations,numericalcomputation} |
+ cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics-dev} |
cernlib | 0 | {physics,highenergy-physics} |
- cernlib | 0 | {highenergy-physics} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
code-saturne | 0 | {engineering} |
collada-dom | 0 | {viewing-dev} |
- dune-functions | 0 | {mathematics-dev} |
dune-grid-glue | 0 | {mathematics-dev} |
dune-pdelab | 0 | {mathematics-dev} |
- dune-typetree | 0 | {mathematics-dev} |
etsf-io | 0 | {nanoscale-physics-dev} |
fastjet | 0 | {highenergy-physics-dev} |
frogdata | 0 | {linguistics} |
@@ -205,7 +206,6 @@ Last-Update: Sun, 17 Jul 2022 01:42:04 +0000
libquantum | 0 | {numericalcomputation} |
librsl | 0 | {meteorology-dev} |
libsdsl | 0 | {dataacquisition-dev} |
- libvigraimpex | 0 | {imageanalysis-dev,machine-learning} |
libxsmm | 0 | {mathematics-dev} |
looptools | 0 | {highenergy-physics-dev} |
mclibs | 0 | {highenergy-physics} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/066fe7361fca3405bd60d15a99d7b455eb285a3c
--
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