[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Tue Jul 19 06:50:53 BST 2022



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
b38d534c by Andreas Tille at 2022-07-19T05:50:47+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,11 +1,11 @@
-Last-Update: Tue, 19 Jul 2022 07:47:20 +0200
+Last-Update: Tue, 19 Jul 2022 05:50:20 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
  dcmtk                         |    174 | {covid-19,imaging}                                  | 
- orthanc                       |     99 | {practice,imaging,covid-19}                         | 
- orthanc-wsi                   |     46 | {oncology,his,laboratory,imaging,practice,covid-19} | 
- node-shiny-server             |     39 | {epi,covid-19}                                      | 
+ orthanc                       |     99 | {imaging,covid-19,practice}                         | 
+ orthanc-wsi                   |     46 | {covid-19,imaging,his,laboratory,oncology,practice} | 
+ node-shiny-server             |     39 | {covid-19,epi}                                      | 
  amide                         |     31 | {imaging}                                           | 
  dicomscope                    |     20 | {imaging}                                           | 
  invesalius                    |     15 | {imaging}                                           | 
@@ -13,13 +13,13 @@ Last-Update: Tue, 19 Jul 2022 07:47:20 +0200
  gnumed-server                 |     12 | {practice,covid-19}                                 | 
  mrtrix3                       |     12 | {imaging}                                           | 
  adun.app                      |      8 | {bio}                                               | 
- orthanc-dicomweb              |      8 | {imaging,covid-19}                                  | 
+ orthanc-dicomweb              |      8 | {covid-19,imaging}                                  | 
  pixelmed                      |      8 | {imaging}                                           | 
  plastimatch                   |      8 | {imaging}                                           | 
  king                          |      6 | {typesetting,imaging}                               | 
  librg-utils-perl              |      6 | {bio}                                               | 
  mia                           |      6 | {imaging}                                           | 
- nipype                        |      6 | {imaging,imaging-dev}                               | 
+ nipype                        |      6 | {imaging-dev,imaging}                               | 
  biojava-live                  |      5 | {bio-dev}                                           | 
  libminc                       |      5 | {imaging-dev}                                       | 
  dicompyler                    |      4 | {oncology}                                          | 
@@ -32,16 +32,16 @@ Last-Update: Tue, 19 Jul 2022 07:47:20 +0200
  blimps                        |      3 | {bio}                                               | 
  getdata                       |      3 | {bio}                                               | 
  libsbml                       |      3 | {bio-dev}                                           | 
- oscar                         |      3 | {practice,tools,data}                               | 
+ oscar                         |      3 | {tools,practice,data}                               | 
  pymia                         |      3 | {imaging-dev}                                       | 
  python-wdlparse               |      3 | {bio-dev}                                           | 
- salmon                        |      3 | {covid-19,bio}                                      | 
+ salmon                        |      3 | {bio,covid-19}                                      | 
  sift                          |      3 | {bio}                                               | 
- treeview                      |      3 | {bio-phylogeny,bio}                                 | 
+ treeview                      |      3 | {bio,bio-phylogeny}                                 | 
  anfo                          |      2 | {cloud,bio}                                         | 
  bart-view                     |      2 | {imaging}                                           | 
  bitseq                        |      2 | {bio}                                               | 
- cat-bat                       |      2 | {bio,covid-19}                                      | 
+ cat-bat                       |      2 | {covid-19,bio}                                      | 
  clonalorigin                  |      2 | {bio}                                               | 
  cmtk                          |      2 | {imaging}                                           | 
  elastix                       |      2 | {imaging}                                           | 
@@ -54,7 +54,7 @@ Last-Update: Tue, 19 Jul 2022 07:47:20 +0200
  acedb                         |      1 | {bio,cloud}                                         | 
  arden                         |      1 | {bio,cloud}                                         | 
  assemblytics                  |      1 | {bio}                                               | 
- beast-mcmc                    |      1 | {bio-phylogeny,bio}                                 | 
+ beast-mcmc                    |      1 | {bio,bio-phylogeny}                                 | 
  brig                          |      1 | {bio}                                               | 
  canu                          |      1 | {bio}                                               | 
  clonalframeml                 |      1 | {covid-19,bio}                                      | 
@@ -74,7 +74,7 @@ Last-Update: Tue, 19 Jul 2022 07:47:20 +0200
  orthanc-mysql                 |      1 | {imaging}                                           | 
  orthanc-python                |      1 | {covid-19}                                          | 
  papyrus                       |      1 | {imaging-dev}                                       | 
- phyutility                    |      1 | {cloud,bio}                                         | 
+ phyutility                    |      1 | {bio,cloud}                                         | 
  pigx-rnaseq                   |      1 | {bio,covid-19}                                      | 
  placnet                       |      1 | {bio}                                               | 
  qcumber                       |      1 | {bio}                                               | 
@@ -141,7 +141,7 @@ Last-Update: Tue, 19 Jul 2022 07:47:20 +0200
  metaphlan2                    |      0 | {bio}                                               | 
  metastudent-data              |      0 | {bio}                                               | 
  metastudent-data-2            |      0 | {bio}                                               | 
- mhap                          |      0 | {bio-ngs,bio}                                       | 
+ mhap                          |      0 | {bio,bio-ngs}                                       | 
  mia                           |      0 | {imaging-dev}                                       | 
  miaviewit                     |      0 | {imaging-dev}                                       | 
  microbegps                    |      0 | {bio}                                               | 
@@ -153,7 +153,7 @@ Last-Update: Tue, 19 Jul 2022 07:47:20 +0200
  pique                         |      0 | {bio}                                               | 
  plasmidid                     |      0 | {bio,covid-19}                                      | 
  plasmidseeker                 |      0 | {bio}                                               | 
- pplacer                       |      0 | {bio-phylogeny,bio,covid-19}                        | 
+ pplacer                       |      0 | {covid-19,bio,bio-phylogeny}                        | 
  proalign                      |      0 | {bio,bio-phylogeny}                                 | 
  provean                       |      0 | {bio}                                               | 
  pscan-chip                    |      0 | {bio}                                               | 
@@ -162,25 +162,25 @@ Last-Update: Tue, 19 Jul 2022 07:47:20 +0200
  rambo-k                       |      0 | {bio}                                               | 
  rdp-classifier                |      0 | {bio}                                               | 
  resfinder-db                  |      0 | {bio}                                               | 
- rtax                          |      0 | {bio,cloud}                                         | 
+ rtax                          |      0 | {cloud,bio}                                         | 
  sbmltoolbox                   |      0 | {bio-dev}                                           | 
  seq-gen                       |      0 | {bio}                                               | 
  sga                           |      0 | {bio}                                               | 
  sight                         |      0 | {imaging-dev}                                       | 
  simpleitk                     |      0 | {imaging-dev}                                       | 
- smrtanalysis                  |      0 | {covid-19,bio}                                      | 
+ smrtanalysis                  |      0 | {bio,covid-19}                                      | 
  soapaligner                   |      0 | {bio}                                               | 
  soapsnp                       |      0 | {bio}                                               | 
  sprai                         |      0 | {bio}                                               | 
  srf                           |      0 | {bio-dev}                                           | 
  suitename                     |      0 | {bio}                                               | 
- thesias                       |      0 | {covid-19,bio}                                      | 
+ thesias                       |      0 | {bio,covid-19}                                      | 
  tipp                          |      0 | {covid-19,bio}                                      | 
  trace2dbest                   |      0 | {bio}                                               | 
  xdffileio                     |      0 | {imaging-dev}                                       | 
  xxsds-dynamic                 |      0 | {bio-dev}                                           | 
- zalign                        |      0 | {bio,cloud}                                         | 
+ zalign                        |      0 | {cloud,bio}                                         | 
  libmaus2                      |     -1 | {bio-dev,covid-19}                                  | 
  mssstest                      |     -1 | {tools}                                             | 
-(209 Zeilen)
+(209 rows)
 


=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
+Last-Update: Tue, 19 Jul 2022 05:50:22 +0000
 
       Source                             | Vote   |                    Tasks                                                         |                                Tags                                
 -----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
@@ -20,19 +20,19 @@ Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
  sketch                                  |     25 | {typesetting}                                                                    | 
  bossa                                   |     22 | {devices}                                                                        | 
  guidata                                 |     21 | {dataacquisition-dev}                                                            | 
- guiqwt                                  |     21 | {viewing,numericalcomputation}                                                   | 
+ guiqwt                                  |     21 | {numericalcomputation,viewing}                                                   | 
  cernlib                                 |     20 | {highenergy-physics}                                                             | 
  gts                                     |     20 | {viewing-dev}                                                                    | 
  feedgnuplot                             |     19 | {viewing}                                                                        | 
  flann                                   |     19 | {mathematics-dev,engineering-dev}                                                | 
  geg                                     |     19 | {viewing}                                                                        | 
  ntl                                     |     19 | {mathematics-dev}                                                                | 
- neuron                                  |     18 | {simulations,highenergy-physics,neuroscience-modeling}                           | 
+ neuron                                  |     18 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
  ppl                                     |     17 | {numericalcomputation}                                                           | 
- fftw                                    |     16 | {meteorology-dev,mathematics-dev,physics-dev}                                    | 
+ fftw                                    |     16 | {physics-dev,meteorology-dev,mathematics-dev}                                    | 
  mathgl                                  |     16 | {viewing}                                                                        | 
  libmatio                                |     15 | {mathematics-dev}                                                                | 
- coinor-symphony                         |     14 | {mathematics,logic,numericalcomputation}                                         | 
+ coinor-symphony                         |     14 | {numericalcomputation,mathematics,logic}                                         | 
  getdp                                   |     13 | {simulations,mathematics,engineering}                                            | 
  vitables                                |     13 | {numericalcomputation}                                                           | 
  libm4ri                                 |     12 | {mathematics-dev}                                                                | 
@@ -41,7 +41,7 @@ Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
  ros-ros-environment                     |     12 | {robotics-dev}                                                                   | 
  apophenia                               |     11 | {statistics}                                                                     | 
  cernlib                                 |     11 | {highenergy-physics-dev}                                                         | 
- debian-science                          |     11 | {nanoscale-physics,physics,economics,mathematics,machine-learning}               | 
+ debian-science                          |     11 | {nanoscale-physics,mathematics,economics,physics,machine-learning}               | 
  form                                    |     11 | {mathematics}                                                                    | 
  gfsview                                 |     11 | {viewing}                                                                        | 
  lxi-tools                               |     11 | {engineering,dataacquisition}                                                    | 
@@ -55,15 +55,15 @@ Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
  scalapack                               |     10 | {nanoscale-physics-dev}                                                          | 
  scram                                   |     10 | {engineering}                                                                    | 
  teem                                    |     10 | {imageanalysis}                                                                  | 
- debian-science                          |      9 | {nanoscale-physics,economics,statistics,physics}                                 | 
+ debian-science                          |      9 | {economics,physics,statistics,nanoscale-physics}                                 | 
  jeuclid                                 |      9 | {typesetting,viewing}                                                            | 
  matlab-support                          |      9 | {numericalcomputation,mathematics}                                               | 
  picosat                                 |      9 | {logic}                                                                          | 
  syrthes                                 |      9 | {engineering}                                                                    | 
  tango                                   |      9 | {dataacquisition}                                                                | 
- toulbar2                                |      9 | {numericalcomputation,mathematics,physics,logic}                                 | 
- debian-science                          |      8 | {nanoscale-physics,machine-learning,economics,physics}                           | 
- debian-science                          |      8 | {machine-learning,neuroscience-cognitive}                                        | 
+ toulbar2                                |      9 | {numericalcomputation,physics,logic,mathematics}                                 | 
+ debian-science                          |      8 | {neuroscience-cognitive,machine-learning}                                        | 
+ debian-science                          |      8 | {physics,nanoscale-physics,economics,machine-learning}                           | 
  libcgns                                 |      8 | {engineering}                                                                    | 
  libitpp                                 |      8 | {engineering-dev,mathematics-dev}                                                | 
  polylib                                 |      8 | {mathematics}                                                                    | 
@@ -78,17 +78,17 @@ Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
  lrcalc                                  |      7 | {mathematics-dev}                                                                | 
  rheolef                                 |      7 | {mathematics}                                                                    | 
  uctodata                                |      7 | {linguistics}                                                                    | 
- coinmp                                  |      6 | {logic,numericalcomputation,mathematics-dev}                                     | 
+ coinmp                                  |      6 | {mathematics-dev,numericalcomputation,logic}                                     | 
  debian-science                          |      6 | {electrophysiology}                                                              | 
  dxsamples                               |      6 | {nanoscale-physics}                                                              | 
  libcgns                                 |      6 | {engineering-dev}                                                                | 
- libvigraimpex                           |      6 | {machine-learning,imageanalysis-dev}                                             | 
+ libvigraimpex                           |      6 | {imageanalysis-dev,machine-learning}                                             | 
  libzn-poly                              |      6 | {mathematics-dev}                                                                | 
  opencascade                             |      6 | {simulations}                                                                    | 
  psurface                                |      6 | {numericalcomputation}                                                           | 
  ucto                                    |      6 | {linguistics}                                                                    | 
  urdfdom-headers                         |      6 | {robotics-dev}                                                                   | 
- code-saturne                            |      5 | {engineering-dev,mathematics-dev}                                                | 
+ code-saturne                            |      5 | {mathematics-dev,engineering-dev}                                                | 
  dune-istl                               |      5 | {mathematics-dev}                                                                | 
  libgetdata                              |      5 | {dataacquisition}                                                                | 
  libmatheval                             |      5 | {mathematics}                                                                    | 
@@ -116,10 +116,10 @@ Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
  jhdf                                    |      3 | {engineering-dev}                                                                | 
  libccp4                                 |      3 | {nanoscale-physics-dev}                                                          | 
  libgetdata                              |      3 | {dataacquisition-dev}                                                            | 
- libgtkdatabox                           |      3 | {viewing-dev,engineering-dev}                                                    | 
+ libgtkdatabox                           |      3 | {engineering-dev,viewing-dev}                                                    | 
  looptools                               |      3 | {highenergy-physics}                                                             | 
  newmat                                  |      3 | {mathematics-dev}                                                                | 
- openmx                                  |      3 | {physics,nanoscale-physics}                                                      | 
+ openmx                                  |      3 | {nanoscale-physics,physics}                                                      | 
  qd                                      |      3 | {mathematics-dev}                                                                | 
  sardana                                 |      3 | {dataacquisition}                                                                | 
  timbl                                   |      3 | {linguistics}                                                                    | 
@@ -151,13 +151,13 @@ Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
  harp                                    |      1 | {meteorology}                                                                    | 
  libgetdata                              |      1 | {dataacquisition-dev}                                                            | 
  liblbfgs                                |      1 | {mathematics-dev}                                                                | 
- libvigraimpex                           |      1 | {machine-learning,imageanalysis-dev}                                             | 
+ libvigraimpex                           |      1 | {imageanalysis-dev,machine-learning}                                             | 
  looptools                               |      1 | {highenergy-physics-dev}                                                         | 
  mbtserver                               |      1 | {linguistics}                                                                    | 
- metis-edf                               |      1 | {numericalcomputation,engineering}                                               | 
+ metis-edf                               |      1 | {engineering,numericalcomputation}                                               | 
  neuron                                  |      1 | {highenergy-physics-dev}                                                         | 
  openigtlink                             |      1 | {robotics-dev}                                                                   | 
- openturns                               |      1 | {mathematics,engineering,mathematics-dev,meteorology,meteorology-dev,statistics} | 
+ openturns                               |      1 | {meteorology-dev,mathematics-dev,statistics,engineering,mathematics,meteorology} | 
  ros-opencv-apps                         |      1 | {robotics}                                                                       | 
  sparskit                                |      1 | {mathematics-dev}                                                                | 
  tamuanova                               |      1 | {statistics}                                                                     | 
@@ -175,10 +175,10 @@ Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
  apertium-urd-hin                        |      0 | {linguistics}                                                                    | 
  apriltag                                |      0 | {robotics-dev}                                                                   | 
  asl                                     |      0 | {physics-dev}                                                                    | 
- calculix-ccx-doc                        |      0 | {simulations,engineering,numericalcomputation}                                   | 
- calculix-ccx-test                       |      0 | {numericalcomputation,simulations,engineering}                                   | 
+ calculix-ccx-doc                        |      0 | {numericalcomputation,engineering,simulations}                                   | 
+ calculix-ccx-test                       |      0 | {engineering,simulations,numericalcomputation}                                   | 
+ cernlib                                 |      0 | {physics,highenergy-physics}                                                     | 
  cernlib                                 |      0 | {highenergy-physics-dev}                                                         | 
- cernlib                                 |      0 | {highenergy-physics,physics}                                                     | 
  cernlib                                 |      0 | {highenergy-physics}                                                             | 
  ckon                                    |      0 | {highenergy-physics-dev}                                                         | 
  clhep                                   |      0 | {highenergy-physics-dev}                                                         | 
@@ -210,11 +210,11 @@ Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
  ompl                                    |      0 | {robotics}                                                                       | 
  ompl                                    |      0 | {robotics-dev}                                                                   | 
  openturns                               |      0 | {meteorology-dev,engineering-dev,mathematics-dev}                                | 
- openturns                               |      0 | {mathematics-dev,engineering-dev,meteorology-dev}                                | 
+ openturns                               |      0 | {engineering-dev,meteorology-dev,mathematics-dev}                                | 
  psurface                                |      0 | {numericalcomputation}                                                           | 
  pycollada                               |      0 | {engineering-dev}                                                                | 
  python-aws-xray-sdk                     |      0 | {dataacquisition-dev}                                                            | 
- python-escript                          |      0 | {simulations,engineering,numericalcomputation}                                   | 
+ python-escript                          |      0 | {engineering,simulations,numericalcomputation}                                   | 
  qrupdate                                |      0 | {mathematics-dev}                                                                | 
  quadrule                                |      0 | {mathematics-dev}                                                                | 
  robot-testing-framework                 |      0 | {robotics-dev}                                                                   | 
@@ -226,15 +226,15 @@ Last-Update: Tue, 19 Jul 2022 07:47:38 +0200
  sagemath-database-graphs                |      0 | {mathematics}                                                                    | 
  sagemath-database-polytopes             |      0 | {mathematics}                                                                    | 
  siscone                                 |      0 | {highenergy-physics-dev}                                                         | 
- slicot                                  |      0 | {robotics-dev,engineering-dev}                                                   | 
+ slicot                                  |      0 | {engineering-dev,robotics-dev}                                                   | 
  ssm                                     |      0 | {nanoscale-physics-dev}                                                          | 
  ssm                                     |      0 | {nanoscale-physics}                                                              | 
  tachyon                                 |      0 | {mathematics}                                                                    | 
  tango                                   |      0 | {dataacquisition}                                                                | 
  triangle                                |      0 | {physics-dev}                                                                    | 
- trilinos                                |      0 | {engineering-dev,physics-dev,mathematics-dev}                                    | 
+ trilinos                                |      0 | {physics-dev,engineering-dev,mathematics-dev}                                    | 
  visp-images                             |      0 | {robotics-dev}                                                                   | 
  vlfeat                                  |      0 | {imageanalysis-dev}                                                              | 
  apertium-afr-nld                        |     -1 | {linguistics}                                                                    | 
-(268 Zeilen)
+(268 rows)
 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.

=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 19 Jul 2022 07:46:54 +0200
+Last-Update: Tue, 19 Jul 2022 05:50:23 +0000
 
      Source                            | Vote   |                          Tags                          
 ---------------------------------------+--------+--------------------------------------------------------
@@ -465,11 +465,11 @@ Last-Update: Tue, 19 Jul 2022 07:46:54 +0200
  power                                 |      0 | 
  powerline                             |      0 | 
  powerline-gitstatus                   |      0 | 
- py-macaroon-bakery                    |      0 | 
  pydenticon                            |      0 | 
  pyfltk                                |      0 | 
  pygtkspellcheck                       |      0 | 
  pylibmc                               |      0 | 
+ py-macaroon-bakery                    |      0 | 
  pymediainfo                           |      0 | 
  pyment                                |      0 | 
  pynag                                 |      0 | 
@@ -477,6 +477,7 @@ Last-Update: Tue, 19 Jul 2022 07:46:54 +0200
  pytest-expect                         |      0 | 
  pytest-pep8                           |      0 | 
  pytest-regressions                    |      0 | 
+ python3-onelogin-saml2                |      0 | 
  python-aiohttp-security               |      0 | 
  python-aiohttp-session                |      0 | 
  python-babel                          |      0 | 
@@ -524,13 +525,13 @@ Last-Update: Tue, 19 Jul 2022 07:46:54 +0200
  python-openqa-client                  |      0 | 
  python-openstep-plist                 |      0 | 
  python-opentracing                    |      0 | 
- python-persist-queue                  |      0 | 
  python-persisting-theory              |      0 | 
- python-py-zipkin                      |      0 | 
+ python-persist-queue                  |      0 | 
  python-pyftpdlib                      |      0 | 
  python-pylibsrtp                      |      0 | 
  python-pypump                         |      0 | 
  python-pyvmomi                        |      0 | 
+ python-py-zipkin                      |      0 | 
  python-repoze.tm2                     |      0 | 
  python-rfc6555                        |      0 | 
  python-sarif-python-om                |      0 | 
@@ -550,7 +551,6 @@ Last-Update: Tue, 19 Jul 2022 07:46:54 +0200
  python-whoosh                         |      0 | 
  python-xmlsec                         |      0 | 
  python-zstandard                      |      0 | 
- python3-onelogin-saml2                |      0 | 
  pytkdocs                              |      0 | 
  pywavefront                           |      0 | 
  pywavelets                            |      0 | 
@@ -589,5 +589,5 @@ Last-Update: Tue, 19 Jul 2022 07:46:54 +0200
  r4d                                   |     -1 | 
  s3ql                                  |     -1 | 
  txdbus                                |     -1 | 
-(605 Zeilen)
+(605 rows)
 



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/b38d534c1fa4ab19f286603800d9628d5b904086

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