[med-svn] [Git][med-team/python-cogent][upstream] New upstream version 2022.5.25a1+dfsg

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / python-cogent


Commits:
77d46ea5 by Andreas Tille at 2022-07-29T11:56:06+02:00
New upstream version 2022.5.25a1+dfsg
- - - - -


30 changed files:

- .github/dependabot.yml
- .github/workflows/testing_develop.yml
- .gitignore
- .hgignore
- .hgtags
- − .readthedocs.yml
- README.md
- − c3dev-environment.yml
- changelog.md
- doc/Makefile
- + doc/api/__init__/cogent3.__init__.load_seq.rst
- doc/api/index.rst
- doc/app/align-codon.rst
- doc/app/align-nucleotide.rst
- doc/app/align-protein.rst
- doc/app/dstore.rst
- doc/app/evo-ancestral-states.rst
- doc/app/evo-dt-nuc-model.rst
- doc/app/evo-extract-model-stats.rst
- doc/app/evo-hypothesis.rst
- doc/app/evo-model-timehet.rst
- doc/app/evo-model-with-tree.rst
- doc/app/evo-model.rst
- doc/app/evo-natsel_neutral.rst
- doc/app/evo-natsel_sitehet.rst
- doc/app/evo-natsel_timehet.rst
- doc/app/evo-natsel_zhang.rst
- doc/app/evo-nstat-codon-model.rst
- doc/app/evo-tr-codon-model.rst
- doc/app/evo-tr-nuc-model.rst


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-cogent/-/commit/77d46ea59ee816b9d3af8bb1f0b491014ec53a6a

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