Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
db01868d by Andreas Tille at 2022-06-19T13:42:20+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,37 +1,36 @@
-Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
+Last-Update: Sun, 19 Jun 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 169 | {covid-19,imaging} |
+ dcmtk | 171 | {covid-19,imaging} |
orthanc | 100 | {imaging,covid-19,practice} |
orthanc-wsi | 47 | {covid-19,imaging,his,laboratory,oncology,practice} |
- node-shiny-server | 41 | {covid-19,epi} |
- amide | 21 | {imaging} |
+ node-shiny-server | 42 | {covid-19,epi} |
+ amide | 20 | {imaging} |
dicom3tools | 18 | {imaging} |
dicomscope | 17 | {imaging} |
orthanc-webviewer | 16 | {imaging} |
gnumed-server | 15 | {practice,covid-19} |
+ gdcm | 12 | {imaging-dev} |
+ invesalius | 12 | {imaging} |
orthanc-dicomweb | 12 | {covid-19,imaging} |
- gdcm | 11 | {imaging-dev} |
- invesalius | 11 | {imaging} |
+ mrtrix3 | 10 | {imaging} |
gdcm | 9 | {imaging,covid-19} |
- mrtrix3 | 9 | {imaging} |
adun.app | 7 | {bio} |
biojava-live | 7 | {bio-dev} |
+ nipype | 7 | {imaging-dev,imaging} |
staden | 7 | {bio} |
- elastix | 6 | {imaging} |
- nipype | 6 | {imaging-dev,imaging} |
+ libminc | 6 | {imaging-dev} |
+ librg-utils-perl | 6 | {bio} |
obitools | 6 | {bio} |
pixelmed | 6 | {imaging} |
treeview | 6 | {bio,bio-phylogeny} |
bio-tradis | 5 | {bio,bio-dev} |
+ elastix | 5 | {imaging} |
jebl2 | 5 | {bio-dev} |
- libminc | 5 | {imaging-dev} |
- librg-utils-perl | 5 | {bio} |
orthanc-gdcm | 5 | {imaging} |
orthanc-postgresql | 5 | {imaging} |
pymia | 5 | {imaging-dev} |
- salmon | 5 | {bio,covid-19} |
canu | 4 | {bio} |
getdata | 4 | {bio} |
ghmm | 4 | {bio} |
@@ -46,6 +45,7 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
rdp-alignment | 4 | {bio} |
runcircos-gui | 4 | {bio} |
saint | 4 | {bio} |
+ salmon | 4 | {bio,covid-19} |
sibsim4 | 4 | {cloud,bio} |
spread-phy | 4 | {bio,bio-phylogeny} |
stacks | 4 | {bio} |
@@ -56,6 +56,7 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
beast-mcmc | 3 | {bio,bio-phylogeny} |
biomaj3-cli | 3 | {cloud} |
bitseq | 3 | {bio} |
+ blimps | 3 | {bio} |
brig | 3 | {bio} |
cat-bat | 3 | {covid-19,bio} |
clonalframeml | 3 | {covid-19,bio} |
@@ -83,6 +84,7 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
rdp-classifier | 3 | {bio} |
rtax | 3 | {cloud,bio} |
sga | 3 | {bio} |
+ sift | 3 | {bio} |
soapaligner | 3 | {bio} |
soapsnp | 3 | {bio} |
sprai | 3 | {bio} |
@@ -93,7 +95,6 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
tvc | 3 | {bio} |
varna | 3 | {bio} |
zalign | 3 | {cloud,bio} |
- blimps | 2 | {bio} |
cufflinks | 2 | {cloud,bio} |
dextractor | 2 | {covid-19,bio} |
embassy-domalign | 2 | {bio,cloud} |
@@ -112,7 +113,6 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
plasmidseeker | 2 | {bio} |
proalign | 2 | {bio,bio-phylogeny} |
qcumber | 2 | {bio} |
- sift | 2 | {bio} |
skesa | 2 | {bio} |
thesias | 2 | {bio,covid-19} |
tophat-recondition | 2 | {covid-19,bio} |
@@ -144,6 +144,7 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
pique | 1 | {bio} |
plasmidid | 1 | {bio,covid-19} |
pplacer | 1 | {covid-19,bio,bio-phylogeny} |
+ provean | 1 | {bio} |
seq-gen | 1 | {bio} |
srf | 1 | {bio-dev} |
tipp | 1 | {covid-19,bio} |
@@ -175,9 +176,8 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
orthanc-imagej | 0 | {imaging} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
- provean | 0 | {bio} |
- python-seqcluster | 0 | {bio-dev,covid-19} |
python-seqcluster | 0 | {bio} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
resfinder-db | 0 | {bio} |
rockhopper | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,23 +1,23 @@
-Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
+Last-Update: Sun, 19 Jun 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 2945 | {viewing} |
- sympy | 1938 | {nanoscale-physics,physics} |
- armadillo | 187 | {mathematics-dev} |
- suitesparse | 148 | {mathematics-dev,numericalcomputation} |
- python-pyqtgraph | 142 | {viewing} |
- atlas | 84 | {mathematics-dev} |
+ gts | 2929 | {viewing} |
+ sympy | 1942 | {nanoscale-physics,physics} |
+ armadillo | 180 | {mathematics-dev} |
+ python-pyqtgraph | 145 | {viewing} |
+ suitesparse | 145 | {mathematics-dev,numericalcomputation} |
+ atlas | 82 | {mathematics-dev} |
nltk | 81 | {linguistics} |
- arpack | 61 | {mathematics-dev} |
- cypari2 | 52 | {mathematics-dev} |
- imview | 43 | {viewing} |
+ arpack | 63 | {mathematics-dev} |
+ cypari2 | 51 | {mathematics-dev} |
+ imview | 44 | {viewing} |
arduino-mk | 41 | {robotics} |
- flintqs | 38 | {mathematics} |
- eclib | 36 | {mathematics} |
- rubiks | 36 | {geometry,mathematics} |
+ flintqs | 36 | {mathematics} |
pyzo | 35 | {numericalcomputation} |
- fftw | 32 | {physics-dev,mathematics-dev,meteorology-dev} |
+ rubiks | 35 | {geometry,mathematics} |
+ eclib | 34 | {mathematics} |
+ fftw | 33 | {physics-dev,mathematics-dev,meteorology-dev} |
sketch | 22 | {typesetting} |
feedgnuplot | 21 | {viewing} |
libmatio | 21 | {mathematics-dev} |
@@ -25,65 +25,65 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
bossa | 18 | {devices} |
geg | 18 | {viewing} |
neuron | 17 | {simulations,highenergy-physics,neuroscience-modeling} |
- ppl | 17 | {numericalcomputation} |
+ fftw | 16 | {meteorology-dev,mathematics-dev,physics-dev} |
guidata | 16 | {dataacquisition-dev} |
- ntl | 16 | {mathematics-dev} |
- fftw | 15 | {meteorology-dev,mathematics-dev,physics-dev} |
+ ppl | 16 | {numericalcomputation} |
flann | 15 | {mathematics-dev,engineering-dev} |
mathgl | 15 | {viewing} |
+ ntl | 15 | {mathematics-dev} |
vitables | 15 | {numericalcomputation} |
cernlib | 14 | {highenergy-physics-dev} |
guiqwt | 14 | {viewing,numericalcomputation} |
- libm4ri | 14 | {mathematics-dev} |
- opencascade | 14 | {simulations} |
+ scalapack | 14 | {nanoscale-physics-dev} |
coinor-symphony | 13 | {logic,numericalcomputation,mathematics} |
form | 13 | {mathematics} |
gts | 13 | {viewing-dev} |
+ libm4ri | 13 | {mathematics-dev} |
ros-ros-environment | 13 | {robotics-dev} |
- scalapack | 13 | {nanoscale-physics-dev} |
cliquer | 12 | {mathematics} |
getdp | 12 | {engineering,simulations,mathematics} |
gfsview | 12 | {viewing} |
neuron | 12 | {highenergy-physics-dev} |
picosat | 12 | {logic} |
auto-07p | 11 | {mathematics} |
- libm4rie | 11 | {mathematics-dev} |
+ debian-science | 11 | {mathematics,economics,machine-learning,physics,nanoscale-physics} |
+ opencascade | 11 | {simulations} |
opticalraytracer | 11 | {physics} |
- polylib | 11 | {mathematics} |
+ rheolef | 11 | {mathematics} |
uctodata | 11 | {linguistics} |
- debian-science | 10 | {mathematics,economics,machine-learning,physics,nanoscale-physics} |
+ debian-science | 10 | {neuroscience-cognitive,machine-learning} |
+ libm4rie | 10 | {mathematics-dev} |
lxi-tools | 10 | {dataacquisition,engineering} |
+ polylib | 10 | {mathematics} |
python-escript | 10 | {numericalcomputation,simulations,engineering} |
- rheolef | 10 | {mathematics} |
syrthes | 10 | {engineering} |
ucto | 10 | {linguistics} |
apophenia | 9 | {statistics} |
- cliquer | 9 | {mathematics-dev} |
- debian-science | 9 | {neuroscience-cognitive,machine-learning} |
- dune-uggrid | 9 | {mathematics-dev} |
+ debian-science | 9 | {economics,statistics,nanoscale-physics,physics} |
eclib | 9 | {mathematics-dev} |
- iml | 9 | {mathematics-dev} |
ipe-tools | 9 | {typesetting} |
jeuclid | 9 | {typesetting,viewing} |
libcgns | 9 | {engineering} |
- libzn-poly | 9 | {mathematics-dev} |
pcl | 9 | {robotics-dev} |
tango | 9 | {dataacquisition} |
toulbar2 | 9 | {logic,numericalcomputation,mathematics,physics} |
- debian-science | 8 | {economics,statistics,nanoscale-physics,physics} |
- libhomfly | 8 | {mathematics-dev} |
+ cliquer | 8 | {mathematics-dev} |
+ dune-uggrid | 8 | {mathematics-dev} |
+ iml | 8 | {mathematics-dev} |
+ libzn-poly | 8 | {mathematics-dev} |
lrcalc | 8 | {mathematics-dev} |
scram | 8 | {engineering} |
urdfdom-headers | 8 | {robotics-dev} |
- alberta | 7 | {engineering-dev} |
code-saturne | 7 | {mathematics-dev,engineering-dev} |
+ debian-science | 7 | {economics,physics,nanoscale-physics,machine-learning} |
gf2x | 7 | {mathematics-dev} |
+ libhomfly | 7 | {mathematics-dev} |
libitpp | 7 | {engineering-dev,mathematics-dev} |
libmatheval | 7 | {mathematics} |
opencascade | 7 | {simulations} |
ros-rosconsole | 7 | {robotics-dev} |
+ alberta | 6 | {engineering-dev} |
coinmp | 6 | {mathematics-dev,logic,numericalcomputation} |
- debian-science | 6 | {economics,physics,nanoscale-physics,machine-learning} |
dxflib | 6 | {engineering-dev} |
dxsamples | 6 | {nanoscale-physics} |
frog | 6 | {linguistics} |
@@ -96,6 +96,8 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
teem | 6 | {imageanalysis} |
astk | 5 | {engineering} |
cimg | 5 | {imageanalysis-dev} | {x11::library}
+ debian-science | 5 | {tools} |
+ debian-science | 5 | {electrophysiology} |
dimbl | 5 | {linguistics} |
ipe-tools | 5 | {typesetting} |
ratpoints | 5 | {mathematics-dev} |
@@ -105,9 +107,10 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
apertium-streamparser | 4 | {linguistics} |
cbflib | 4 | {nanoscale-physics} |
cernlib | 4 | {highenergy-physics} |
+ debian-science | 4 | {psychophysics} |
+ debian-science | 4 | {economics} |
debian-science | 4 | {electrophysiology} |
- debian-science | 4 | {tools} |
- dune-istl | 4 | {mathematics-dev} |
+ debian-science | 4 | {nanoscale-physics-dev} |
etsf-io | 4 | {nanoscale-physics,physics} |
harp | 4 | {meteorology} |
libcgns | 4 | {engineering-dev} |
@@ -116,15 +119,14 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
mbt | 4 | {linguistics} |
morse-simulator | 4 | {robotics} |
qd | 4 | {mathematics-dev} |
+ tango | 4 | {dataacquisition-dev} |
taurus | 4 | {dataacquisition} |
timblserver | 4 | {linguistics} |
apophenia | 3 | {statistics} |
coda | 3 | {meteorology-dev} |
code-saturne | 3 | {engineering-dev,mathematics-dev} |
- debian-science | 3 | {electrophysiology} |
- debian-science | 3 | {economics} |
- debian-science | 3 | {nanoscale-physics-dev} |
- debian-science | 3 | {psychophysics} |
+ debian-science | 3 | {neuroscience-cognitive} |
+ dune-istl | 3 | {mathematics-dev} |
fastjet | 3 | {highenergy-physics-dev} |
gemmlowp | 3 | {mathematics-dev} |
libgetdata | 3 | {dataacquisition-dev} |
@@ -142,17 +144,18 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
simbody | 3 | {robotics-dev} |
tango | 3 | {dataacquisition-dev} |
x13as | 3 | {economics} |
+ cbflib | 2 | {nanoscale-physics-dev} |
cernlib | 2 | {highenergy-physics} |
cld2 | 2 | {linguistics} |
clhep | 2 | {highenergy-physics-dev} |
+ clipper | 2 | {nanoscale-physics-dev} |
coda | 2 | {meteorology} |
cqrlib | 2 | {mathematics-dev} |
cvector | 2 | {mathematics-dev} |
debian-science | 2 | {physics} |
- debian-science | 2 | {neuroscience-cognitive} |
- dune-localfunctions | 2 | {mathematics-dev} |
itsol | 2 | {mathematics-dev} |
jhdf | 2 | {engineering} |
+ libccp4 | 2 | {nanoscale-physics-dev} |
libgetdata | 2 | {dataacquisition-dev} |
liblbfgs | 2 | {mathematics-dev} |
libvigraimpex | 2 | {imageanalysis-dev,machine-learning} |
@@ -161,17 +164,14 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
mrmpi | 2 | {tools} |
neartree | 2 | {numericalcomputation,mathematics-dev} |
sparskit | 2 | {mathematics-dev} |
- tango | 2 | {dataacquisition-dev} |
apriltag | 1 | {robotics-dev} |
asl | 1 | {physics-dev} |
- cbflib | 1 | {nanoscale-physics-dev} |
cernlib | 1 | {highenergy-physics} |
- clipper | 1 | {nanoscale-physics-dev} |
coda | 1 | {meteorology-dev} |
collada-dom | 1 | {viewing-dev} |
+ dune-localfunctions | 1 | {mathematics-dev} |
frogdata | 1 | {linguistics} |
jhdf | 1 | {engineering-dev} |
- libccp4 | 1 | {nanoscale-physics-dev} |
libdogleg | 1 | {mathematics-dev} |
liblxi | 1 | {engineering-dev,dataacquisition-dev} |
liborigin2 | 1 | {viewing-dev} |
@@ -202,9 +202,9 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
apertium-urd-hin | 0 | {linguistics} |
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,numericalcomputation,engineering} |
- cernlib | 0 | {highenergy-physics} |
- cernlib | 0 | {highenergy-physics-dev} |
cernlib | 0 | {highenergy-physics,physics} |
+ cernlib | 0 | {highenergy-physics-dev} |
+ cernlib | 0 | {highenergy-physics} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -232,8 +232,8 @@ Last-Update: Sun, 19 Jun 2022 01:42:03 +0000
python-escript | 0 | {engineering,simulations,numericalcomputation} |
qrupdate | 0 | {mathematics-dev} |
robot-testing-framework | 0 | {robotics-dev} |
- ros-metapackages | 0 | {robotics-dev} |
ros-metapackages | 0 | {robotics} |
+ ros-metapackages | 0 | {robotics-dev} |
sagemath-database-combinatorial-designs | 0 | {mathematics} |
sagemath-database-conway-polynomials | 0 | {mathematics} |
sagemath-database-elliptic-curves | 0 | {mathematics} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/db01868d0af2ce897ebfc059b7d65e9d30737f6c
--
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