Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
4b3d6d51 by Andreas Tille at 2022-03-05T13:42:57+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,44 +1,44 @@
-Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
+Last-Update: Sat, 05 Mar 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 174 | {covid-19,imaging} |
- orthanc | 97 | {imaging,covid-19,practice} |
+ dcmtk | 180 | {covid-19,imaging} |
+ orthanc | 98 | {imaging,covid-19,practice} |
orthanc-wsi | 45 | {his,laboratory,covid-19,oncology,practice,imaging} |
- htsjdk | 32 | {bio-dev} |
+ htsjdk | 31 | {bio-dev} |
amide | 27 | {imaging} |
- dicomscope | 27 | {imaging} |
- dicom3tools | 26 | {imaging} |
- dcm2niix | 20 | {imaging} |
+ dicom3tools | 27 | {imaging} |
+ dicomscope | 25 | {imaging} |
+ dcm2niix | 21 | {imaging} |
gnumed-server | 16 | {practice,covid-19} |
orthanc-webviewer | 15 | {imaging} |
gdcm | 14 | {imaging-dev} |
- invesalius | 14 | {imaging} |
gdcm | 13 | {covid-19,imaging} |
- nifticlib | 12 | {imaging} |
- pixelmed | 12 | {imaging} |
- minc-tools | 11 | {imaging} |
+ invesalius | 13 | {imaging} |
+ nifticlib | 13 | {imaging} |
+ minc-tools | 12 | {imaging} |
openslide | 11 | {imaging-dev} |
+ openslide | 11 | {imaging} |
+ pixelmed | 11 | {imaging} |
dicomnifti | 10 | {imaging} |
- openslide | 10 | {imaging} |
libminc | 9 | {imaging-dev} |
- nifticlib | 9 | {imaging-dev} |
+ nipype | 9 | {imaging-dev,imaging} |
biojava-live | 8 | {bio-dev} |
- nifti2dicom | 8 | {imaging} |
- nipype | 8 | {imaging-dev,imaging} |
+ nifticlib | 8 | {imaging-dev} |
adun.app | 7 | {bio} |
lagan | 7 | {bio} |
librg-utils-perl | 7 | {bio} |
+ mia | 7 | {imaging} |
mrtrix3 | 7 | {imaging} |
+ nifti2dicom | 7 | {imaging} |
orthanc-dicomweb | 7 | {covid-19,imaging} |
orthanc-postgresql | 7 | {imaging} |
oscar | 7 | {practice,tools,data} |
salmon | 7 | {bio,covid-19} |
- mia | 6 | {imaging} |
+ plastimatch | 6 | {imaging} |
libncl | 5 | {bio} |
nifti2dicom | 5 | {imaging} |
obitools | 5 | {bio} |
- plastimatch | 5 | {imaging} |
bio-tradis | 4 | {bio-dev,bio} |
ghmm | 4 | {bio} |
jebl2 | 4 | {bio-dev} |
@@ -51,6 +51,7 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
blimps | 3 | {bio} |
canu | 3 | {bio} |
clonalorigin | 3 | {bio} |
+ cmtk | 3 | {imaging} |
dicompyler | 3 | {oncology} |
embassy-domainatrix | 3 | {cloud,bio} |
embassy-domsearch | 3 | {bio,cloud} |
@@ -78,9 +79,9 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
brig | 2 | {bio} |
cat-bat | 2 | {bio,covid-19} |
clonalframeml | 2 | {covid-19,bio} |
- cmtk | 2 | {imaging} |
cufflinks | 2 | {bio,cloud} |
delly | 2 | {covid-19,bio} |
+ elastix | 2 | {imaging} |
embassy-domalign | 2 | {bio,cloud} |
fastml | 2 | {bio} |
gatb-core | 2 | {bio} |
@@ -123,7 +124,6 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
biomaj3-cli | 1 | {cloud} |
cutesv | 1 | {bio} |
dextractor | 1 | {bio,covid-19} |
- elastix | 1 | {imaging} |
emboss-explorer | 1 | {bio} |
emmax | 1 | {bio} |
kmerresistance | 1 | {bio} |
@@ -135,7 +135,6 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
mssstest | 1 | {tools} |
opencfu | 1 | {laboratory} |
opensurgsim | 1 | {imaging-dev} |
- papyrus | 1 | {imaging-dev} |
pigx-rnaseq | 1 | {covid-19,bio} |
pique | 1 | {bio} |
seq-gen | 1 | {bio} |
@@ -186,12 +185,13 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
ncbi-vdb | 0 | {bio-dev} |
nifticlib | 0 | {imaging-dev} |
orthanc-imagej | 0 | {imaging} |
+ papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
plasmidid | 0 | {covid-19,bio} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
shovill | 0 | {covid-19,bio} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,96 +1,97 @@
-Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
+Last-Update: Sat, 05 Mar 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 3124 | {viewing} |
- sympy | 1737 | {physics,nanoscale-physics} |
- suitesparse | 263 | {mathematics-dev,numericalcomputation} |
- spyder | 244 | {numericalcomputation} |
- armadillo | 231 | {mathematics-dev} |
- python-pyqtgraph | 156 | {viewing} |
- atlas | 105 | {mathematics-dev} |
+ gts | 3130 | {viewing} |
+ sympy | 1758 | {physics,nanoscale-physics} |
+ suitesparse | 274 | {mathematics-dev,numericalcomputation} |
+ spyder | 239 | {numericalcomputation} |
+ armadillo | 232 | {mathematics-dev} |
+ python-pyqtgraph | 154 | {viewing} |
+ atlas | 101 | {mathematics-dev} |
arpack | 60 | {mathematics-dev} |
- cypari2 | 58 | {mathematics-dev} |
- arduino-mk | 56 | {robotics} |
- pyzo | 56 | {numericalcomputation} |
- imview | 52 | {viewing} |
- fftw | 45 | {physics-dev,meteorology-dev,mathematics-dev} |
- rubiks | 45 | {geometry,mathematics} |
- flintqs | 44 | {mathematics} |
- eclib | 42 | {mathematics} |
- scalapack | 41 | {nanoscale-physics-dev} |
+ cypari2 | 56 | {mathematics-dev} |
+ arduino-mk | 53 | {robotics} |
+ imview | 53 | {viewing} |
+ fftw | 43 | {physics-dev,meteorology-dev,mathematics-dev} |
+ rubiks | 42 | {geometry,mathematics} |
+ scalapack | 42 | {nanoscale-physics-dev} |
+ flintqs | 39 | {mathematics} |
+ pyzo | 39 | {numericalcomputation} |
+ eclib | 37 | {mathematics} |
bibutils | 29 | {typesetting} |
guidata | 27 | {dataacquisition-dev} |
guiqwt | 27 | {numericalcomputation,viewing} |
gts | 25 | {viewing-dev} |
sketch | 25 | {typesetting} |
bossa | 23 | {devices} |
- feedgnuplot | 22 | {viewing} |
- flann | 22 | {mathematics-dev,engineering-dev} |
+ feedgnuplot | 23 | {viewing} |
geg | 22 | {viewing} |
fftw | 20 | {meteorology-dev,physics-dev,mathematics-dev} |
+ flann | 20 | {mathematics-dev,engineering-dev} |
+ vitables | 20 | {numericalcomputation} |
neuron | 19 | {neuroscience-modeling,highenergy-physics,simulations} |
ntl | 19 | {mathematics-dev} |
- vitables | 18 | {numericalcomputation} |
- cernlib | 17 | {highenergy-physics} |
- nltk | 17 | {linguistics} |
+ cernlib | 18 | {highenergy-physics} |
+ nltk | 18 | {linguistics} |
opencascade | 17 | {simulations} |
- ppl | 17 | {numericalcomputation} |
- coinor-symphony | 16 | {numericalcomputation,logic,mathematics} |
libmatio | 16 | {mathematics-dev} |
- libitpp | 15 | {engineering-dev,mathematics-dev} |
+ ppl | 16 | {numericalcomputation} |
+ coinor-symphony | 15 | {numericalcomputation,logic,mathematics} |
ros-ros-environment | 15 | {robotics-dev} |
- apophenia | 14 | {statistics} |
gfsview | 14 | {viewing} |
- mathgl | 14 | {viewing} |
+ libitpp | 14 | {engineering-dev,mathematics-dev} |
+ matlab-support | 14 | {mathematics,numericalcomputation} |
+ opticalraytracer | 14 | {physics} |
+ apophenia | 13 | {statistics} |
libm4ri | 13 | {mathematics-dev} |
- matlab-support | 13 | {mathematics,numericalcomputation} |
- opticalraytracer | 13 | {physics} |
+ mathgl | 13 | {viewing} |
pcl | 13 | {robotics-dev} |
picosat | 13 | {logic} |
tango | 13 | {dataacquisition} |
- auto-07p | 12 | {mathematics} |
- debian-science | 12 | {physics,nanoscale-physics,machine-learning,economics,mathematics} |
- form | 12 | {mathematics} |
lxi-tools | 12 | {engineering,dataacquisition} |
neuron | 12 | {highenergy-physics-dev} |
- rheolef | 12 | {mathematics} |
ros-rosconsole | 12 | {robotics-dev} |
+ auto-07p | 11 | {mathematics} |
cernlib | 11 | {highenergy-physics-dev} |
- getdp | 11 | {engineering,mathematics,simulations} |
+ debian-science | 11 | {physics,nanoscale-physics,machine-learning,economics,mathematics} |
+ form | 11 | {mathematics} |
muparser | 11 | {mathematics-dev} |
- polylib | 11 | {mathematics} |
+ rheolef | 11 | {mathematics} |
+ debian-science | 10 | {nanoscale-physics,machine-learning,physics,economics} |
+ getdp | 10 | {engineering,mathematics,simulations} |
+ polylib | 10 | {mathematics} |
+ psurface | 10 | {numericalcomputation} |
uctodata | 10 | {linguistics} |
urdfdom-headers | 10 | {robotics-dev} |
- cliquer | 9 | {mathematics} |
- debian-science | 9 | {nanoscale-physics,machine-learning,physics,economics} |
- dune-uggrid | 9 | {mathematics-dev} |
eclib | 9 | {mathematics-dev} |
libcgns | 9 | {engineering} |
lrcalc | 9 | {mathematics-dev} |
- psurface | 9 | {numericalcomputation} |
tango | 9 | {dataacquisition} |
teem | 9 | {imageanalysis} |
toulbar2 | 9 | {logic,physics,mathematics,numericalcomputation} |
ucto | 9 | {linguistics} |
+ cliquer | 8 | {mathematics} |
debian-science | 8 | {neuroscience-cognitive,machine-learning} |
- debian-science | 8 | {physics,nanoscale-physics,statistics,economics} |
- lrcalc | 8 | {mathematics} |
+ etsf-io | 8 | {nanoscale-physics,physics} |
coda | 7 | {meteorology} |
code-saturne | 7 | {engineering-dev,mathematics-dev} |
debian-science | 7 | {electrophysiology} |
+ debian-science | 7 | {physics,nanoscale-physics,statistics,economics} |
+ dune-uggrid | 7 | {mathematics-dev} |
dxsamples | 7 | {nanoscale-physics} |
- etsf-io | 7 | {nanoscale-physics,physics} |
jeuclid | 7 | {typesetting,viewing} |
libgetdata | 7 | {dataacquisition} |
libm4rie | 7 | {mathematics-dev} |
libzn-poly | 7 | {mathematics-dev} |
+ lrcalc | 7 | {mathematics} |
scram | 7 | {engineering} |
simbody | 7 | {robotics-dev} |
syrthes | 7 | {engineering} |
taurus | 7 | {dataacquisition} |
astk | 6 | {engineering} |
cernlib | 6 | {highenergy-physics} |
+ cimg | 6 | {imageanalysis-dev} | {x11::library}
cliquer | 6 | {mathematics-dev} |
coinmp | 6 | {logic,mathematics-dev,numericalcomputation} |
debian-science | 6 | {tools} |
@@ -99,43 +100,42 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
iml | 6 | {mathematics-dev} |
ipe-tools | 6 | {typesetting} |
libbraiding | 6 | {mathematics-dev} |
+ neuron | 6 | {highenergy-physics-dev} |
qd | 6 | {mathematics-dev} |
- cimg | 5 | {imageanalysis-dev} | {x11::library}
debian-science | 5 | {psychophysics} |
- dune-istl | 5 | {mathematics-dev} |
fastjet | 5 | {highenergy-physics-dev} |
libmatheval | 5 | {mathematics} |
libvigraimpex | 5 | {machine-learning,imageanalysis-dev} |
- morse-simulator | 5 | {robotics} |
- neuron | 5 | {highenergy-physics-dev} |
opencascade | 5 | {simulations} |
python-escript | 5 | {simulations,numericalcomputation,engineering} |
ratpoints | 5 | {mathematics-dev} |
x13as | 5 | {economics} |
- alberta | 4 | {engineering-dev} |
apophenia | 4 | {statistics} |
+ cernlib | 4 | {highenergy-physics} |
clhep | 4 | {highenergy-physics-dev} |
- debian-science | 4 | {nanoscale-physics-dev} |
debian-science | 4 | {electrophysiology} |
+ debian-science | 4 | {nanoscale-physics-dev} |
+ dune-istl | 4 | {mathematics-dev} |
dxflib | 4 | {engineering-dev} |
frog | 4 | {linguistics} |
libgetdata | 4 | {dataacquisition-dev} |
libhomfly | 4 | {mathematics-dev} |
liblxi | 4 | {engineering-dev,dataacquisition-dev} |
libmatheval | 4 | {mathematics-dev} |
+ morse-simulator | 4 | {robotics} |
newmat | 4 | {mathematics-dev} |
ompl | 4 | {robotics-dev} |
openstereogram | 4 | {tools} |
sac2mseed | 4 | {geography} |
sardana | 4 | {dataacquisition} |
tango | 4 | {dataacquisition-dev} |
+ alberta | 3 | {engineering-dev} |
apertium-streamparser | 3 | {linguistics} |
cernlib | 3 | {highenergy-physics} |
coda | 3 | {meteorology-dev} |
debian-science | 3 | {economics} |
debian-science | 3 | {neuroscience-cognitive} |
dimbl | 3 | {linguistics} |
- dune-localfunctions | 3 | {mathematics-dev} |
harp | 3 | {meteorology} |
ipe-tools | 3 | {typesetting} |
irstlm | 3 | {linguistics} |
@@ -156,9 +156,9 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
timblserver | 3 | {linguistics} |
cbflib | 2 | {nanoscale-physics-dev} |
cbflib | 2 | {nanoscale-physics} |
- cernlib | 2 | {highenergy-physics} |
clipper | 2 | {nanoscale-physics-dev} |
debian-science | 2 | {physics} |
+ dune-localfunctions | 2 | {mathematics-dev} |
libccp4 | 2 | {nanoscale-physics-dev} |
libgetdata | 2 | {dataacquisition-dev} |
looptools | 2 | {highenergy-physics} |
@@ -169,8 +169,6 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
cld2 | 1 | {linguistics} |
cqrlib | 1 | {mathematics-dev} |
cvector | 1 | {mathematics-dev} |
- dune-functions | 1 | {mathematics-dev} |
- dune-typetree | 1 | {mathematics-dev} |
frogdata | 1 | {linguistics} |
gemmlowp | 1 | {mathematics-dev} |
itsol | 1 | {mathematics-dev} |
@@ -182,8 +180,8 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
ompl | 1 | {robotics} |
openctm | 1 | {physics-dev} |
openigtlink | 1 | {robotics-dev} |
- openturns | 1 | {statistics,meteorology-dev,mathematics-dev,mathematics,engineering,meteorology} |
openturns | 1 | {engineering-dev,meteorology-dev,mathematics-dev} |
+ openturns | 1 | {statistics,meteorology-dev,mathematics-dev,mathematics,engineering,meteorology} |
psurface | 1 | {numericalcomputation} |
pycollada | 1 | {engineering-dev} |
python-aws-xray-sdk | 1 | {dataacquisition-dev} |
@@ -230,16 +228,18 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
calculix-ccx-doc | 0 | {engineering,numericalcomputation,simulations} |
calculix-ccx-test | 0 | {numericalcomputation,simulations,engineering} |
cernlib | 0 | {highenergy-physics} |
- cernlib | 0 | {highenergy-physics,physics} |
cernlib | 0 | {highenergy-physics-dev} |
+ cernlib | 0 | {highenergy-physics,physics} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
code-saturne | 0 | {engineering} |
code-saturne | 0 | {engineering-dev,mathematics-dev} |
collada-dom | 0 | {viewing-dev} |
+ dune-functions | 0 | {mathematics-dev} |
dune-grid-glue | 0 | {mathematics-dev} |
dune-pdelab | 0 | {mathematics-dev} |
+ dune-typetree | 0 | {mathematics-dev} |
etsf-io | 0 | {nanoscale-physics-dev} |
fastjet | 0 | {highenergy-physics-dev} |
glpk-java | 0 | {mathematics-dev} |
@@ -256,8 +256,8 @@ Last-Update: Sat, 05 Mar 2022 01:42:04 +0000
metis-edf | 0 | {engineering-dev} |
openturns | 0 | {meteorology-dev,engineering-dev,mathematics-dev} |
qrupdate | 0 | {mathematics-dev} |
- ros-metapackages | 0 | {robotics} |
ros-metapackages | 0 | {robotics-dev} |
+ ros-metapackages | 0 | {robotics} |
sagemath-database-combinatorial-designs | 0 | {mathematics} |
sagemath-database-conway-polynomials | 0 | {mathematics} |
sagemath-database-elliptic-curves | 0 | {mathematics} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/4b3d6d51718a9e3e6675af4626a40cecee0d2d40
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/4b3d6d51718a9e3e6675af4626a40cecee0d2d40
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20220305/2530a4db/attachment-0001.htm>