[med-svn] [Git][med-team/pbbam][master] 7 commits: routine-update: New upstream version

Andreas Tille (@tille) gitlab at salsa.debian.org
Mon Mar 7 14:32:39 GMT 2022



Andreas Tille pushed to branch master at Debian Med / pbbam


Commits:
56fbc342 by Andreas Tille at 2022-03-07T14:53:28+01:00
routine-update: New upstream version

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44e17c9a by Andreas Tille at 2022-03-07T14:53:29+01:00
New upstream version 2.0.0+dfsg
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595a8329 by Andreas Tille at 2022-03-07T14:53:33+01:00
Update upstream source from tag 'upstream/2.0.0+dfsg'

Update to upstream version '2.0.0+dfsg'
with Debian dir 8bff228d05f65c9920edc43800916a1413aa0410
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9cd447a9 by Andreas Tille at 2022-03-07T15:06:34+01:00
Update patches

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18ae710d by Andreas Tille at 2022-03-07T15:14:37+01:00
Boost patch seems to be unneeded

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68267f04 by Andreas Tille at 2022-03-07T15:25:58+01:00
Bump SONAME to 2.0.0

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cc2db9a2 by Andreas Tille at 2022-03-07T15:30:58+01:00
Upload to unstable

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30 changed files:

- .clang-format
- .gitignore
- CHANGELOG.md
- debian/changelog
- debian/control
- debian/patches/boost_optional.patch
- debian/patches/series
- include/pbbam/AlignmentPrinter.h
- include/pbbam/BaiIndexCache.h
- include/pbbam/BaiIndexedBamReader.h
- include/pbbam/BamFile.h
- include/pbbam/BamFileMerger.h
- include/pbbam/BamHeader.h
- include/pbbam/BamReader.h
- include/pbbam/BamRecord.h
- include/pbbam/BamRecordImpl.h
- include/pbbam/BamRecordTag.h
- include/pbbam/BamRecordView.h
- include/pbbam/BamTagCodec.h
- include/pbbam/BamWriter.h
- include/pbbam/BgzipFastaWriter.h
- include/pbbam/BgzipFastqWriter.h
- include/pbbam/Cigar.h
- include/pbbam/CollectionMetadata.h
- include/pbbam/Compare.h
- include/pbbam/CompositeBamReader.h
- include/pbbam/CompositeFastaReader.h
- include/pbbam/DataSet.h
- include/pbbam/DataSetTypes.h
- include/pbbam/EntireFileQuery.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/pbbam/-/compare/352bf9b8e393ea93337c0e6439c153dc83b659e9...cc2db9a241c80b6cfa1721dff6839a9828dbb5a8

-- 
View it on GitLab: https://salsa.debian.org/med-team/pbbam/-/compare/352bf9b8e393ea93337c0e6439c153dc83b659e9...cc2db9a241c80b6cfa1721dff6839a9828dbb5a8
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