[med-svn] [Git][med-team/pbdagcon][master] 5 commits: Versioned Build-Depends and Depends on pbseqlib based binary packages

[Nilesh Patra (@nilesh)]

Nilesh Patra pushed to branch master at Debian Med / pbdagcon


Commits:
8e986f23 by Nilesh Patra at 2022-03-10T00:35:48+05:30
Versioned Build-Depends and Depends on pbseqlib based binary packages

- - - - -
e7bd136d by Nilesh Patra at 2022-03-10T00:46:35+05:30
Drop Pranav from uploaders

- - - - -
7e553a3c by Nilesh Patra at 2022-03-10T00:51:29+05:30
d/rules: Drop DEB_CFLAGS_MAINT_APPEND (fixes FTBFS)

- - - - -
457a0955 by Nilesh Patra at 2022-03-10T01:01:03+05:30
Remove forcing -std=c++14

- - - - -
5a264bf6 by Nilesh Patra at 2022-03-10T01:01:28+05:30
Upload to unstable

- - - - -


4 changed files:

- debian/changelog
- debian/control
- debian/patches/compiler-flags.patch
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,15 @@
+pbdagcon (0.3+git20180411.c14c422+dfsg-7) unstable; urgency=medium
+
+  * Team Upload.
+  * Versioned Build-Depends and Depends on
+    pbseqlib based binary packages to pass debci
+  * Drop Pranav from uploaders
+    + Thanks for your work so far
+  * d/rules: Drop DEB_CFLAGS_MAINT_APPEND (fixes FTBFS)
+  * d/p/compiler-flags.patch: Remove forcing -std=c++14
+
+ -- Nilesh Patra <nilesh at debian.org>  Thu, 10 Mar 2022 01:01:16 +0530
+
 pbdagcon (0.3+git20180411.c14c422+dfsg-6) unstable; urgency=medium
 
   * Rebuild against libpbcopper


=====================================
debian/control
=====================================
@@ -1,7 +1,6 @@
 Source: pbdagcon
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Andreas Tille <tille at debian.org>,
-           Pranav Ballaney <ballaneypranav at gmail.com>
+Uploaders: Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
 Build-Depends: debhelper-compat (= 13),
@@ -10,11 +9,11 @@ Build-Depends: debhelper-compat (= 13),
                libhdf5-dev,
                libboost-dev,
                libtclap-dev,
-               libpbseq-dev (>= 5.3.3),
+               libpbseq-dev (>= 5.3.5+dfsg-4~),
                libpbbam-dev,
-               libpbdata-dev (>= 5.3.3),
+               libpbdata-dev (>= 5.3.5+dfsg-4~),
                libpbcopper-dev,
-               libpbihdf-dev (>= 5.3.3),
+               libpbihdf-dev (>= 5.3.5+dfsg-4~),
                googletest <!nocheck>
 Standards-Version: 4.6.0
 Vcs-Browser: https://salsa.debian.org/med-team/pbdagcon
@@ -26,7 +25,7 @@ Package: pbdagcon
 Architecture: any
 Depends: ${shlibs:Depends},
          ${misc:Depends},
-         libpbseq (>= 5.3.3)
+         libpbseq (>= 5.3.5+dfsg-4~)
 Suggests: blasr
 Description: sequence consensus using directed acyclic graphs
  pbdagcon is a tool that implements DAGCon (Directed Acyclic Graph Consensus)


=====================================
debian/patches/compiler-flags.patch
=====================================
@@ -10,7 +10,7 @@ Last-Update: 2016-10-23
  CPPFLAGS += -MMD -MP
 -CXXFLAGS = -O3 -std=c++14 -Wall -Wuninitialized -pedantic
 -CFLAGS = -O3 -Wall -Wextra -fno-strict-aliasing
-+CXXFLAGS += -O3 -std=c++14 -Wall -Wuninitialized -pedantic
++CXXFLAGS += -O3 -Wall -Wuninitialized -pedantic
 +CFLAGS += -O3 -Wall -Wextra -fno-strict-aliasing
  
  INCDIRS := \
@@ -22,7 +22,7 @@ Last-Update: 2016-10-23
  GTEST_CXXFLAGS += -g -Wall -Wextra -pthread
  
 -CXXFLAGS := -O3 -std=c++14
-+CXXFLAGS += -O3 -std=c++14
++CXXFLAGS += -O3
  
  GTEST_OBJECTS := gtest-all.o gtest_main.o
  DAZCON_OBJECTS := DB.o QV.o align.o Alignment.o \


=====================================
debian/rules
=====================================
@@ -3,8 +3,6 @@
 #DH_VERBOSE = 1
 include /usr/share/dpkg/default.mk
 
-export DEB_CFLAGS_MAINT_APPEND=-std=c++11
-
 GTEST = /usr/src/googletest/googletest
 export GTEST_INCLUDE := $(GTEST)/include
 export GTEST_SRC := $(GTEST)/src



View it on GitLab: https://salsa.debian.org/med-team/pbdagcon/-/compare/aaec20f2128b059e6fc1f78779117eaf705f963d...5a264bf625ba28986640e09829bc84543ca1ed24

-- 
View it on GitLab: https://salsa.debian.org/med-team/pbdagcon/-/compare/aaec20f2128b059e6fc1f78779117eaf705f963d...5a264bf625ba28986640e09829bc84543ca1ed24
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