[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Fri Mar 11 13:43:04 GMT 2022



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
4f9f268f by Andreas Tille at 2022-03-11T13:42:59+00:00
automatic update

- - - - -


3 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,42 +1,42 @@
-Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
+Last-Update: Fri, 11 Mar 2022 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
  dcmtk                         |    177 | {covid-19,imaging}                                  | 
- orthanc                       |     99 | {imaging,covid-19,practice}                         | 
+ orthanc                       |    100 | {imaging,covid-19,practice}                         | 
  orthanc-wsi                   |     48 | {his,laboratory,covid-19,oncology,practice,imaging} | 
  amide                         |     28 | {imaging}                                           | 
- dicomscope                    |     28 | {imaging}                                           | 
  dicom3tools                   |     27 | {imaging}                                           | 
+ dicomscope                    |     27 | {imaging}                                           | 
  dcm2niix                      |     20 | {imaging}                                           | 
  orthanc-webviewer             |     17 | {imaging}                                           | 
  gnumed-server                 |     15 | {practice,covid-19}                                 | 
- invesalius                    |     14 | {imaging}                                           | 
  openslide                     |     14 | {imaging}                                           | 
- gdcm                          |     12 | {covid-19,imaging}                                  | 
- minc-tools                    |     12 | {imaging}                                           | 
+ invesalius                    |     13 | {imaging}                                           | 
  dicomnifti                    |     11 | {imaging}                                           | 
  gdcm                          |     11 | {imaging-dev}                                       | 
+ gdcm                          |     11 | {covid-19,imaging}                                  | 
+ minc-tools                    |     11 | {imaging}                                           | 
  openslide                     |     10 | {imaging-dev}                                       | 
- pixelmed                      |     10 | {imaging}                                           | 
  nifticlib                     |      9 | {imaging}                                           | 
+ pixelmed                      |      9 | {imaging}                                           | 
  adun.app                      |      8 | {bio}                                               | 
  biojava-live                  |      8 | {bio-dev}                                           | 
- mia                           |      8 | {imaging}                                           | 
  mrtrix3                       |      8 | {imaging}                                           | 
  nifti2dicom                   |      8 | {imaging}                                           | 
  orthanc-postgresql            |      8 | {imaging}                                           | 
  libminc                       |      7 | {imaging-dev}                                       | 
+ mia                           |      7 | {imaging}                                           | 
  nipype                        |      7 | {imaging-dev,imaging}                               | 
  orthanc-dicomweb              |      7 | {covid-19,imaging}                                  | 
  oscar                         |      7 | {practice,tools,data}                               | 
- plastimatch                   |      7 | {imaging}                                           | 
  salmon                        |      7 | {bio,covid-19}                                      | 
  jebl2                         |      6 | {bio-dev}                                           | 
  librg-utils-perl              |      6 | {bio}                                               | 
  nifti2dicom                   |      6 | {imaging}                                           | 
  nifticlib                     |      6 | {imaging-dev}                                       | 
  obitools                      |      6 | {bio}                                               | 
+ plastimatch                   |      6 | {imaging}                                           | 
  treeview                      |      6 | {bio-phylogeny,bio}                                 | 
  getdata                       |      5 | {bio}                                               | 
  libncl                        |      5 | {bio}                                               | 
@@ -46,7 +46,6 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  bio-tradis                    |      4 | {bio-dev,bio}                                       | 
  clonalorigin                  |      4 | {bio}                                               | 
  cmtk                          |      4 | {imaging}                                           | 
- dicompyler                    |      4 | {oncology}                                          | 
  ghmm                          |      4 | {bio}                                               | 
  jellyfish1                    |      4 | {bio}                                               | 
  king                          |      4 | {imaging,typesetting}                               | 
@@ -59,6 +58,7 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  bitseq                        |      3 | {bio}                                               | 
  blimps                        |      3 | {bio}                                               | 
  canu                          |      3 | {bio}                                               | 
+ dicompyler                    |      3 | {oncology}                                          | 
  elastix                       |      3 | {imaging}                                           | 
  embassy-domainatrix           |      3 | {cloud,bio}                                         | 
  embassy-domsearch             |      3 | {bio,cloud}                                         | 
@@ -132,6 +132,7 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  mssstest                      |      1 | {tools}                                             | 
  opencfu                       |      1 | {laboratory}                                        | 
  opensurgsim                   |      1 | {imaging-dev}                                       | 
+ parallel-fastq-dump           |      1 | {covid-19}                                          | 
  pigx-rnaseq                   |      1 | {covid-19,bio}                                      | 
  pique                         |      1 | {bio}                                               | 
  pplacer                       |      1 | {covid-19,bio-phylogeny,bio}                        | 
@@ -184,7 +185,6 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  nifticlib                     |      0 | {imaging-dev}                                       | 
  orthanc-imagej                |      0 | {imaging}                                           | 
  papyrus                       |      0 | {imaging-dev}                                       | 
- parallel-fastq-dump           |      0 | {covid-19}                                          | 
  pbcopper                      |      0 | {bio-dev}                                           | 
  pbseqlib                      |      0 | {bio-dev}                                           | 
  plasmidid                     |      0 | {covid-19,bio}                                      | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,83 +1,82 @@
-Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
+Last-Update: Fri, 11 Mar 2022 13:42:05 +0000
 
       Source                             | Vote   |                    Tasks                                                         |                                Tags                                
 -----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts                                     |   3068 | {viewing}                                                                        | 
- sympy                                   |   1746 | {physics,nanoscale-physics}                                                      | 
- suitesparse                             |    274 | {mathematics-dev,numericalcomputation}                                           | 
+ gts                                     |   3076 | {viewing}                                                                        | 
+ sympy                                   |   1751 | {physics,nanoscale-physics}                                                      | 
+ suitesparse                             |    277 | {mathematics-dev,numericalcomputation}                                           | 
  spyder                                  |    233 | {numericalcomputation}                                                           | 
- armadillo                               |    216 | {mathematics-dev}                                                                | 
+ armadillo                               |    214 | {mathematics-dev}                                                                | 
  python-pyqtgraph                        |    143 | {viewing}                                                                        | 
- atlas                                   |     91 | {mathematics-dev}                                                                | 
- cypari2                                 |     58 | {mathematics-dev}                                                                | 
- arpack                                  |     56 | {mathematics-dev}                                                                | 
- arduino-mk                              |     48 | {robotics}                                                                       | 
- imview                                  |     47 | {viewing}                                                                        | 
+ atlas                                   |     89 | {mathematics-dev}                                                                | 
+ cypari2                                 |     55 | {mathematics-dev}                                                                | 
+ arpack                                  |     54 | {mathematics-dev}                                                                | 
+ arduino-mk                              |     49 | {robotics}                                                                       | 
+ imview                                  |     46 | {viewing}                                                                        | 
  pyzo                                    |     46 | {numericalcomputation}                                                           | 
- flintqs                                 |     43 | {mathematics}                                                                    | 
- rubiks                                  |     42 | {geometry,mathematics}                                                           | 
  scalapack                               |     41 | {nanoscale-physics-dev}                                                          | 
- eclib                                   |     40 | {mathematics}                                                                    | 
- fftw                                    |     30 | {physics-dev,meteorology-dev,mathematics-dev}                                    | 
- feedgnuplot                             |     24 | {viewing}                                                                        | 
+ flintqs                                 |     40 | {mathematics}                                                                    | 
+ rubiks                                  |     39 | {geometry,mathematics}                                                           | 
+ eclib                                   |     37 | {mathematics}                                                                    | 
+ fftw                                    |     31 | {physics-dev,meteorology-dev,mathematics-dev}                                    | 
  gts                                     |     23 | {viewing-dev}                                                                    | 
  guidata                                 |     23 | {dataacquisition-dev}                                                            | 
  guiqwt                                  |     23 | {numericalcomputation,viewing}                                                   | 
  sketch                                  |     23 | {typesetting}                                                                    | 
- bossa                                   |     21 | {devices}                                                                        | 
+ bossa                                   |     22 | {devices}                                                                        | 
+ feedgnuplot                             |     22 | {viewing}                                                                        | 
  geg                                     |     21 | {viewing}                                                                        | 
  ntl                                     |     21 | {mathematics-dev}                                                                | 
- flann                                   |     20 | {mathematics-dev,engineering-dev}                                                | 
+ cernlib                                 |     20 | {highenergy-physics}                                                             | 
  ppl                                     |     20 | {numericalcomputation}                                                           | 
- cernlib                                 |     18 | {highenergy-physics}                                                             | 
- vitables                                |     18 | {numericalcomputation}                                                           | 
- nltk                                    |     17 | {linguistics}                                                                    | 
+ flann                                   |     19 | {mathematics-dev,engineering-dev}                                                | 
+ vitables                                |     19 | {numericalcomputation}                                                           | 
+ nltk                                    |     18 | {linguistics}                                                                    | 
+ picosat                                 |     17 | {logic}                                                                          | 
  neuron                                  |     16 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
  opencascade                             |     16 | {simulations}                                                                    | 
- picosat                                 |     16 | {logic}                                                                          | 
  coinor-symphony                         |     15 | {numericalcomputation,logic,mathematics}                                         | 
  ros-ros-environment                     |     15 | {robotics-dev}                                                                   | 
  libmatio                                |     14 | {mathematics-dev}                                                                | 
  opticalraytracer                        |     14 | {physics}                                                                        | 
  auto-07p                                |     13 | {mathematics}                                                                    | 
+ cernlib                                 |     13 | {highenergy-physics-dev}                                                         | 
  gfsview                                 |     13 | {viewing}                                                                        | 
  libitpp                                 |     13 | {engineering-dev,mathematics-dev}                                                | 
  libm4ri                                 |     13 | {mathematics-dev}                                                                | 
+ matlab-support                          |     13 | {mathematics,numericalcomputation}                                               | 
  pcl                                     |     13 | {robotics-dev}                                                                   | 
  tango                                   |     13 | {dataacquisition}                                                                | 
  form                                    |     12 | {mathematics}                                                                    | 
- matlab-support                          |     12 | {mathematics,numericalcomputation}                                               | 
  uctodata                                |     12 | {linguistics}                                                                    | 
- cernlib                                 |     11 | {highenergy-physics-dev}                                                         | 
  cliquer                                 |     11 | {mathematics}                                                                    | 
+ fftw                                    |     11 | {meteorology-dev,physics-dev,mathematics-dev}                                    | 
+ lxi-tools                               |     11 | {engineering,dataacquisition}                                                    | 
  mathgl                                  |     11 | {viewing}                                                                        | 
  rheolef                                 |     11 | {mathematics}                                                                    | 
  ucto                                    |     11 | {linguistics}                                                                    | 
- fftw                                    |     10 | {meteorology-dev,physics-dev,mathematics-dev}                                    | 
- lxi-tools                               |     10 | {engineering,dataacquisition}                                                    | 
  muparser                                |     10 | {mathematics-dev}                                                                | 
  neuron                                  |     10 | {highenergy-physics-dev}                                                         | 
  polylib                                 |     10 | {mathematics}                                                                    | 
- ros-rosconsole                          |     10 | {robotics-dev}                                                                   | 
  debian-science                          |      9 | {nanoscale-physics,machine-learning,physics,economics}                           | 
  eclib                                   |      9 | {mathematics-dev}                                                                | 
  getdp                                   |      9 | {engineering,mathematics,simulations}                                            | 
  libcgns                                 |      9 | {engineering}                                                                    | 
  lrcalc                                  |      9 | {mathematics-dev}                                                                | 
  psurface                                |      9 | {numericalcomputation}                                                           | 
+ ros-rosconsole                          |      9 | {robotics-dev}                                                                   | 
  tango                                   |      9 | {dataacquisition}                                                                | 
  toulbar2                                |      9 | {logic,physics,mathematics,numericalcomputation}                                 | 
- urdfdom-headers                         |      9 | {robotics-dev}                                                                   | 
  apophenia                               |      8 | {statistics}                                                                     | 
  debian-science                          |      8 | {physics,nanoscale-physics,machine-learning,economics,mathematics}               | 
  etsf-io                                 |      8 | {nanoscale-physics,physics}                                                      | 
  lrcalc                                  |      8 | {mathematics}                                                                    | 
  scram                                   |      8 | {engineering}                                                                    | 
  syrthes                                 |      8 | {engineering}                                                                    | 
+ urdfdom-headers                         |      8 | {robotics-dev}                                                                   | 
  code-saturne                            |      7 | {engineering-dev,mathematics-dev}                                                | 
  debian-science                          |      7 | {physics,nanoscale-physics,statistics,economics}                                 | 
  debian-science                          |      7 | {neuroscience-cognitive,machine-learning}                                        | 
- dune-uggrid                             |      7 | {mathematics-dev}                                                                | 
  dxsamples                               |      7 | {nanoscale-physics}                                                              | 
  ipe-tools                               |      7 | {typesetting}                                                                    | 
  libm4rie                                |      7 | {mathematics-dev}                                                                | 
@@ -86,10 +85,10 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  qd                                      |      7 | {mathematics-dev}                                                                | 
  teem                                    |      7 | {imageanalysis}                                                                  | 
  astk                                    |      6 | {engineering}                                                                    | 
- cimg                                    |      6 | {imageanalysis-dev}                                                              | {x11::library}
  cliquer                                 |      6 | {mathematics-dev}                                                                | 
  coda                                    |      6 | {meteorology}                                                                    | 
  debian-science                          |      6 | {electrophysiology}                                                              | 
+ dune-uggrid                             |      6 | {mathematics-dev}                                                                | 
  frog                                    |      6 | {linguistics}                                                                    | 
  gf2x                                    |      6 | {mathematics-dev}                                                                | 
  hpcc                                    |      6 | {distributedcomputing,numericalcomputation}                                      | 
@@ -98,6 +97,7 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  libbraiding                             |      6 | {mathematics-dev}                                                                | 
  libgetdata                              |      6 | {dataacquisition}                                                                | 
  cernlib                                 |      5 | {highenergy-physics}                                                             | 
+ cimg                                    |      5 | {imageanalysis-dev}                                                              | {x11::library}
  coda                                    |      5 | {meteorology-dev}                                                                | 
  coinmp                                  |      5 | {logic,mathematics-dev,numericalcomputation}                                     | 
  debian-science                          |      5 | {tools}                                                                          | 
@@ -114,22 +114,20 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  timbl                                   |      5 | {linguistics}                                                                    | 
  cernlib                                 |      4 | {highenergy-physics}                                                             | 
  clhep                                   |      4 | {highenergy-physics-dev}                                                         | 
- debian-science                          |      4 | {nanoscale-physics-dev}                                                          | 
  debian-science                          |      4 | {electrophysiology}                                                              | 
+ debian-science                          |      4 | {nanoscale-physics-dev}                                                          | 
  dune-istl                               |      4 | {mathematics-dev}                                                                | 
  dxflib                                  |      4 | {engineering-dev}                                                                | 
  fastjet                                 |      4 | {highenergy-physics-dev}                                                         | 
  libgetdata                              |      4 | {dataacquisition-dev}                                                            | 
  libhomfly                               |      4 | {mathematics-dev}                                                                | 
  liblxi                                  |      4 | {engineering-dev,dataacquisition-dev}                                            | 
- libvigraimpex                           |      4 | {machine-learning,imageanalysis-dev}                                             | 
  mbtserver                               |      4 | {linguistics}                                                                    | 
  newmat                                  |      4 | {mathematics-dev}                                                                | 
  opencascade                             |      4 | {simulations}                                                                    | 
  openmx                                  |      4 | {nanoscale-physics,physics}                                                      | 
  openstereogram                          |      4 | {tools}                                                                          | 
  qwtplot3d                               |      4 | {viewing-dev}                                                                    | 
- tango                                   |      4 | {dataacquisition-dev}                                                            | 
  timblserver                             |      4 | {linguistics}                                                                    | 
  x13as                                   |      4 | {economics}                                                                      | 
  alberta                                 |      3 | {engineering-dev}                                                                | 
@@ -139,11 +137,12 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  cernlib                                 |      3 | {highenergy-physics}                                                             | 
  debian-science                          |      3 | {neuroscience-cognitive}                                                         | 
  harp                                    |      3 | {meteorology}                                                                    | 
- jhdf                                    |      3 | {engineering-dev}                                                                | 
  jhdf                                    |      3 | {engineering}                                                                    | 
+ jhdf                                    |      3 | {engineering-dev}                                                                | 
  libcgns                                 |      3 | {engineering-dev}                                                                | 
  liblbfgs                                |      3 | {mathematics-dev}                                                                | 
  libmatheval                             |      3 | {mathematics-dev}                                                                | 
+ libvigraimpex                           |      3 | {machine-learning,imageanalysis-dev}                                             | 
  looptools                               |      3 | {highenergy-physics-dev}                                                         | 
  looptools                               |      3 | {highenergy-physics}                                                             | 
  morse-simulator                         |      3 | {robotics}                                                                       | 
@@ -158,17 +157,18 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  cbflib                                  |      2 | {nanoscale-physics-dev}                                                          | 
  cernlib                                 |      2 | {highenergy-physics}                                                             | 
  clipper                                 |      2 | {nanoscale-physics-dev}                                                          | 
- debian-science                          |      2 | {economics}                                                                      | 
  debian-science                          |      2 | {physics}                                                                        | 
+ debian-science                          |      2 | {economics}                                                                      | 
  dune-localfunctions                     |      2 | {mathematics-dev}                                                                | 
  libccp4                                 |      2 | {nanoscale-physics-dev}                                                          | 
  libgetdata                              |      2 | {dataacquisition-dev}                                                            | 
  libvigraimpex                           |      2 | {imageanalysis-dev,machine-learning}                                             | 
- mrmpi                                   |      2 | {tools}                                                                          | 
  ompl                                    |      2 | {robotics-dev}                                                                   | 
+ tango                                   |      2 | {dataacquisition-dev}                                                            | 
  apriltag                                |      1 | {robotics-dev}                                                                   | 
  asl                                     |      1 | {physics-dev}                                                                    | 
  cld2                                    |      1 | {linguistics}                                                                    | 
+ collada-dom                             |      1 | {viewing-dev}                                                                    | 
  cqrlib                                  |      1 | {mathematics-dev}                                                                | 
  cvector                                 |      1 | {mathematics-dev}                                                                | 
  frogdata                                |      1 | {linguistics}                                                                    | 
@@ -176,6 +176,7 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  itsol                                   |      1 | {mathematics-dev}                                                                | 
  liborigin2                              |      1 | {viewing-dev}                                                                    | 
  metis-edf                               |      1 | {numericalcomputation,engineering}                                               | 
+ mrmpi                                   |      1 | {tools}                                                                          | 
  neartree                                |      1 | {mathematics-dev,numericalcomputation}                                           | 
  openctm                                 |      1 | {physics-dev}                                                                    | 
  openigtlink                             |      1 | {robotics-dev}                                                                   | 
@@ -231,7 +232,6 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  coda                                    |      0 | {meteorology-dev}                                                                | 
  code-saturne                            |      0 | {engineering}                                                                    | 
  code-saturne                            |      0 | {engineering-dev,mathematics-dev}                                                | 
- collada-dom                             |      0 | {viewing-dev}                                                                    | 
  dune-functions                          |      0 | {mathematics-dev}                                                                | 
  dune-grid-glue                          |      0 | {mathematics-dev}                                                                | 
  dune-pdelab                             |      0 | {mathematics-dev}                                                                | 
@@ -254,8 +254,8 @@ Last-Update: Fri, 11 Mar 2022 01:42:04 +0000
  openturns                               |      0 | {meteorology-dev,engineering-dev,mathematics-dev}                                | 
  python-escript                          |      0 | {engineering,simulations,numericalcomputation}                                   | 
  qrupdate                                |      0 | {mathematics-dev}                                                                | 
- ros-metapackages                        |      0 | {robotics-dev}                                                                   | 
  ros-metapackages                        |      0 | {robotics}                                                                       | 
+ ros-metapackages                        |      0 | {robotics-dev}                                                                   | 
  ros-opencv-apps                         |      0 | {robotics}                                                                       | 
  sagemath-database-combinatorial-designs |      0 | {mathematics}                                                                    | 
  sagemath-database-conway-polynomials    |      0 | {mathematics}                                                                    | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/4f9f268f408b662513a4df0b833fc46b9b386a9e

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