Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
b1000b23 by Andreas Tille at 2022-03-14T13:42:55+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,42 +1,39 @@
-Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
+Last-Update: Mon, 14 Mar 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 183 | {covid-19,imaging} |
- orthanc | 100 | {imaging,covid-19,practice} |
+ orthanc | 101 | {imaging,covid-19,practice} |
orthanc-wsi | 48 | {his,laboratory,covid-19,oncology,practice,imaging} |
- dicom3tools | 29 | {imaging} |
dicomscope | 28 | {imaging} |
- amide | 26 | {imaging} |
- dcm2niix | 20 | {imaging} |
+ dicom3tools | 27 | {imaging} |
+ amide | 24 | {imaging} |
+ dcm2niix | 18 | {imaging} |
orthanc-webviewer | 17 | {imaging} |
- gnumed-server | 16 | {practice,covid-19} |
+ gnumed-server | 15 | {practice,covid-19} |
openslide | 14 | {imaging} |
- dicomnifti | 12 | {imaging} |
- gdcm | 12 | {covid-19,imaging} |
+ gdcm | 13 | {covid-19,imaging} |
+ dicomnifti | 11 | {imaging} |
invesalius | 11 | {imaging} |
- minc-tools | 11 | {imaging} |
gdcm | 10 | {imaging-dev} |
+ minc-tools | 10 | {imaging} |
openslide | 10 | {imaging-dev} |
+ pixelmed | 10 | {imaging} |
adun.app | 9 | {bio} |
- biojava-live | 9 | {bio-dev} |
mrtrix3 | 9 | {imaging} |
- nifticlib | 9 | {imaging} |
- pixelmed | 9 | {imaging} |
- nifti2dicom | 8 | {imaging} |
- nipype | 8 | {imaging-dev,imaging} |
+ biojava-live | 8 | {bio-dev} |
+ nifticlib | 8 | {imaging} |
obitools | 8 | {bio} |
orthanc-postgresql | 8 | {imaging} |
salmon | 8 | {bio,covid-19} |
jebl2 | 7 | {bio-dev} |
- libminc | 7 | {imaging-dev} |
librg-utils-perl | 7 | {bio} |
- mia | 7 | {imaging} |
orthanc-dicomweb | 7 | {covid-19,imaging} |
treeview | 7 | {bio-phylogeny,bio} |
+ libminc | 6 | {imaging-dev} |
libncl | 6 | {bio} |
+ mia | 6 | {imaging} |
nifti2dicom | 6 | {imaging} |
- nifticlib | 6 | {imaging-dev} |
oscar | 6 | {practice,tools,data} |
plastimatch | 6 | {imaging} |
beast-mcmc | 5 | {bio-phylogeny,bio} |
@@ -45,8 +42,9 @@ Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
getdata | 5 | {bio} |
ghmm | 5 | {bio} |
jellyfish1 | 5 | {bio} |
- libsbml | 5 | {bio-dev} |
- melting | 5 | {bio,cloud} |
+ nifti2dicom | 5 | {imaging} |
+ nifticlib | 5 | {imaging-dev} |
+ nipype | 5 | {imaging-dev,imaging} |
orthanc-mysql | 5 | {imaging} |
stacks | 5 | {bio} |
tracetuner | 5 | {bio} |
@@ -62,10 +60,9 @@ Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
gatb-core | 4 | {bio} |
king | 4 | {imaging,typesetting} |
lamarc | 4 | {bio} |
+ libsbml | 4 | {bio-dev} |
mauve-aligner | 4 | {bio} |
- phyutility | 4 | {bio,cloud} |
- python-wdlparse | 4 | {bio-dev} |
- qcumber | 4 | {bio} |
+ melting | 4 | {bio,cloud} |
rdp-alignment | 4 | {bio} |
runcircos-gui | 4 | {bio} |
saint | 4 | {bio} |
@@ -91,11 +88,9 @@ Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
metaphlan2 | 3 | {bio} |
mhap | 3 | {bio-ngs,bio} |
orthanc-gdcm | 3 | {imaging} |
- piler | 3 | {bio} |
- placnet | 3 | {bio} |
- plasmidseeker | 3 | {bio} |
- proalign | 3 | {bio-phylogeny,bio} |
- pscan-chip | 3 | {bio} |
+ phyutility | 3 | {bio,cloud} |
+ python-wdlparse | 3 | {bio-dev} |
+ qcumber | 3 | {bio} |
rambo-k | 3 | {bio} |
rdp-classifier | 3 | {bio} |
rtax | 3 | {bio,cloud} |
@@ -119,9 +114,11 @@ Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
libbio-mage-utils-perl | 2 | {bio-dev} |
microbegps | 2 | {bio} |
orthanc-python | 2 | {covid-19} |
- pigx-rnaseq | 2 | {covid-19,bio} |
- pique | 2 | {bio} |
- pplacer | 2 | {covid-19,bio-phylogeny,bio} |
+ piler | 2 | {bio} |
+ placnet | 2 | {bio} |
+ plasmidseeker | 2 | {bio} |
+ proalign | 2 | {bio-phylogeny,bio} |
+ pscan-chip | 2 | {bio} |
pymia | 2 | {imaging-dev} |
skesa | 2 | {bio} |
thesias | 2 | {bio,covid-19} |
@@ -139,7 +136,10 @@ Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
mssstest | 1 | {tools} |
opencfu | 1 | {laboratory} |
opensurgsim | 1 | {imaging-dev} |
+ pigx-rnaseq | 1 | {covid-19,bio} |
+ pique | 1 | {bio} |
plasmidid | 1 | {covid-19,bio} |
+ pplacer | 1 | {covid-19,bio-phylogeny,bio} |
seq-gen | 1 | {bio} |
srf | 1 | {bio-dev} |
varna | 1 | {bio} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,169 +1,167 @@
-Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
+Last-Update: Mon, 14 Mar 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 3075 | {viewing} |
- sympy | 1725 | {physics,nanoscale-physics} |
- suitesparse | 283 | {mathematics-dev,numericalcomputation} |
- spyder | 231 | {numericalcomputation} |
- armadillo | 212 | {mathematics-dev} |
- python-pyqtgraph | 144 | {viewing} |
- atlas | 88 | {mathematics-dev} |
- cypari2 | 57 | {mathematics-dev} |
- arpack | 53 | {mathematics-dev} |
- arduino-mk | 48 | {robotics} |
- imview | 45 | {viewing} |
- pyzo | 44 | {numericalcomputation} |
- rubiks | 41 | {geometry,mathematics} |
- flintqs | 40 | {mathematics} |
+ gts | 3080 | {viewing} |
+ sympy | 1720 | {physics,nanoscale-physics} |
+ suitesparse | 282 | {mathematics-dev,numericalcomputation} |
+ spyder | 230 | {numericalcomputation} |
+ armadillo | 214 | {mathematics-dev} |
+ python-pyqtgraph | 143 | {viewing} |
+ atlas | 87 | {mathematics-dev} |
+ cypari2 | 55 | {mathematics-dev} |
+ arpack | 52 | {mathematics-dev} |
+ arduino-mk | 49 | {robotics} |
+ imview | 47 | {viewing} |
+ pyzo | 43 | {numericalcomputation} |
+ rubiks | 42 | {geometry,mathematics} |
+ flintqs | 39 | {mathematics} |
scalapack | 39 | {nanoscale-physics-dev} |
eclib | 37 | {mathematics} |
fftw | 30 | {physics-dev,meteorology-dev,mathematics-dev} |
- feedgnuplot | 25 | {viewing} |
- sketch | 25 | {typesetting} |
- gts | 23 | {viewing-dev} |
- guidata | 23 | {dataacquisition-dev} |
- guiqwt | 23 | {numericalcomputation,viewing} |
- bossa | 22 | {devices} |
- geg | 22 | {viewing} |
+ feedgnuplot | 24 | {viewing} |
+ sketch | 24 | {typesetting} |
+ bossa | 23 | {devices} |
+ guidata | 22 | {dataacquisition-dev} |
+ guiqwt | 22 | {numericalcomputation,viewing} |
ntl | 22 | {mathematics-dev} |
- cernlib | 21 | {highenergy-physics} |
- ppl | 20 | {numericalcomputation} |
- flann | 19 | {mathematics-dev,engineering-dev} |
- nltk | 19 | {linguistics} |
- vitables | 18 | {numericalcomputation} |
- neuron | 17 | {neuroscience-modeling,highenergy-physics,simulations} |
- opencascade | 17 | {simulations} |
- picosat | 17 | {logic} |
- coinor-symphony | 16 | {numericalcomputation,logic,mathematics} |
+ geg | 21 | {viewing} |
+ gts | 21 | {viewing-dev} |
+ cernlib | 20 | {highenergy-physics} |
+ ppl | 19 | {numericalcomputation} |
+ flann | 18 | {mathematics-dev,engineering-dev} |
+ neuron | 18 | {neuroscience-modeling,highenergy-physics,simulations} |
+ nltk | 18 | {linguistics} |
+ vitables | 16 | {numericalcomputation} |
cernlib | 15 | {highenergy-physics-dev} |
- opticalraytracer | 15 | {physics} |
+ coinor-symphony | 15 | {numericalcomputation,logic,mathematics} |
+ matlab-support | 15 | {mathematics,numericalcomputation} |
+ opencascade | 15 | {simulations} |
+ picosat | 15 | {logic} |
auto-07p | 14 | {mathematics} |
gfsview | 14 | {viewing} |
libm4ri | 14 | {mathematics-dev} |
libmatio | 14 | {mathematics-dev} |
- matlab-support | 14 | {mathematics,numericalcomputation} |
tango | 14 | {dataacquisition} |
form | 13 | {mathematics} |
- pcl | 13 | {robotics-dev} |
- ros-ros-environment | 13 | {robotics-dev} |
- libitpp | 12 | {engineering-dev,mathematics-dev} |
+ opticalraytracer | 13 | {physics} |
lxi-tools | 12 | {engineering,dataacquisition} |
- mathgl | 12 | {viewing} |
- rheolef | 12 | {mathematics} |
- uctodata | 12 | {linguistics} |
- fftw | 11 | {meteorology-dev,physics-dev,mathematics-dev} |
- polylib | 11 | {mathematics} |
- ucto | 11 | {linguistics} |
- cliquer | 10 | {mathematics} |
- getdp | 10 | {engineering,mathematics,simulations} |
- libcgns | 10 | {engineering} |
+ pcl | 12 | {robotics-dev} |
+ ros-ros-environment | 12 | {robotics-dev} |
+ libitpp | 11 | {engineering-dev,mathematics-dev} |
+ mathgl | 11 | {viewing} |
+ neuron | 11 | {highenergy-physics-dev} |
+ uctodata | 11 | {linguistics} |
+ fftw | 10 | {meteorology-dev,physics-dev,mathematics-dev} |
lrcalc | 10 | {mathematics-dev} |
- neuron | 10 | {highenergy-physics-dev} |
+ rheolef | 10 | {mathematics} |
tango | 10 | {dataacquisition} |
- toulbar2 | 10 | {logic,physics,mathematics,numericalcomputation} |
- apophenia | 9 | {statistics} |
- debian-science | 9 | {nanoscale-physics,machine-learning,physics,economics} |
- debian-science | 9 | {physics,nanoscale-physics,machine-learning,economics,mathematics} |
+ ucto | 10 | {linguistics} |
+ cliquer | 9 | {mathematics} |
eclib | 9 | {mathematics-dev} |
- lrcalc | 9 | {mathematics} |
- psurface | 9 | {numericalcomputation} |
+ getdp | 9 | {engineering,mathematics,simulations} |
+ polylib | 9 | {mathematics} |
ros-rosconsole | 9 | {robotics-dev} |
- scram | 9 | {engineering} |
- syrthes | 9 | {engineering} |
- urdfdom-headers | 9 | {robotics-dev} |
- code-saturne | 8 | {engineering-dev,mathematics-dev} |
- debian-science | 8 | {neuroscience-cognitive,machine-learning} |
- debian-science | 8 | {physics,nanoscale-physics,statistics,economics} |
- etsf-io | 8 | {nanoscale-physics,physics} |
+ toulbar2 | 9 | {logic,physics,mathematics,numericalcomputation} |
+ apophenia | 8 | {statistics} |
+ debian-science | 8 | {nanoscale-physics,machine-learning,physics,economics} |
+ debian-science | 8 | {physics,nanoscale-physics,machine-learning,economics,mathematics} |
ipe-tools | 8 | {typesetting} |
+ libcgns | 8 | {engineering} |
libm4rie | 8 | {mathematics-dev} |
libzn-poly | 8 | {mathematics-dev} |
- muparser | 8 | {mathematics-dev} |
- teem | 8 | {imageanalysis} |
+ lrcalc | 8 | {mathematics} |
+ syrthes | 8 | {engineering} |
+ urdfdom-headers | 8 | {robotics-dev} |
cliquer | 7 | {mathematics-dev} |
+ code-saturne | 7 | {engineering-dev,mathematics-dev} |
+ debian-science | 7 | {physics,nanoscale-physics,statistics,economics} |
+ debian-science | 7 | {neuroscience-cognitive,machine-learning} |
dxsamples | 7 | {nanoscale-physics} |
+ etsf-io | 7 | {nanoscale-physics,physics} |
iml | 7 | {mathematics-dev} |
- jeuclid | 7 | {typesetting,viewing} |
libbraiding | 7 | {mathematics-dev} |
- neuron | 7 | {highenergy-physics-dev} |
- qd | 7 | {mathematics-dev} |
- astk | 6 | {engineering} |
+ scram | 7 | {engineering} |
+ teem | 7 | {imageanalysis} |
cernlib | 6 | {highenergy-physics} |
coda | 6 | {meteorology} |
- debian-science | 6 | {electrophysiology} |
- debian-science | 6 | {tools} |
dune-uggrid | 6 | {mathematics-dev} |
- frog | 6 | {linguistics} |
gf2x | 6 | {mathematics-dev} |
+ jeuclid | 6 | {typesetting,viewing} |
libgetdata | 6 | {dataacquisition} |
- simbody | 6 | {robotics-dev} |
+ libvigraimpex | 6 | {machine-learning,imageanalysis-dev} |
+ muparser | 6 | {mathematics-dev} |
+ neuron | 6 | {highenergy-physics-dev} |
+ opencascade | 6 | {simulations} |
+ psurface | 6 | {numericalcomputation} |
+ qd | 6 | {mathematics-dev} |
+ astk | 5 | {engineering} |
coinmp | 5 | {logic,mathematics-dev,numericalcomputation} |
- debian-science | 5 | {psychophysics} |
- dimbl | 5 | {linguistics} |
+ debian-science | 5 | {tools} |
+ debian-science | 5 | {electrophysiology} |
hpcc | 5 | {distributedcomputing,numericalcomputation} |
ipe-tools | 5 | {typesetting} |
- irstlm | 5 | {linguistics} |
libhomfly | 5 | {mathematics-dev} |
libmatheval | 5 | {mathematics} |
- libvigraimpex | 5 | {machine-learning,imageanalysis-dev} |
- mbt | 5 | {linguistics} |
- opencascade | 5 | {simulations} |
+ morse-simulator | 5 | {robotics} |
+ openstereogram | 5 | {tools} |
ratpoints | 5 | {mathematics-dev} |
- sac2mseed | 5 | {geography} |
- taurus | 5 | {dataacquisition} |
+ simbody | 5 | {robotics-dev} |
cernlib | 4 | {highenergy-physics} |
cimg | 4 | {imageanalysis-dev} | {x11::library}
- clhep | 4 | {highenergy-physics-dev} |
- debian-science | 4 | {nanoscale-physics-dev} |
- debian-science | 4 | {electrophysiology} |
+ debian-science | 4 | {psychophysics} |
+ dimbl | 4 | {linguistics} |
dune-istl | 4 | {mathematics-dev} |
- dxflib | 4 | {engineering-dev} |
fastjet | 4 | {highenergy-physics-dev} |
+ frog | 4 | {linguistics} |
+ irstlm | 4 | {linguistics} |
libcgns | 4 | {engineering-dev} |
libgetdata | 4 | {dataacquisition-dev} |
liblxi | 4 | {engineering-dev,dataacquisition-dev} |
- mbtserver | 4 | {linguistics} |
- morse-simulator | 4 | {robotics} |
+ mbt | 4 | {linguistics} |
newmat | 4 | {mathematics-dev} |
openmx | 4 | {nanoscale-physics,physics} |
- openstereogram | 4 | {tools} |
- python-escript | 4 | {simulations,numericalcomputation,engineering} |
qwtplot3d | 4 | {viewing-dev} |
- timbl | 4 | {linguistics} |
- timblserver | 4 | {linguistics} |
+ sac2mseed | 4 | {geography} |
+ taurus | 4 | {dataacquisition} |
alberta | 3 | {engineering-dev} |
apertium-streamparser | 3 | {linguistics} |
apophenia | 3 | {statistics} |
- cbflib | 3 | {nanoscale-physics} |
cernlib | 3 | {highenergy-physics} |
- coda | 3 | {meteorology-dev} |
- debian-science | 3 | {neuroscience-cognitive} |
- harp | 3 | {meteorology} |
+ clhep | 3 | {highenergy-physics-dev} |
+ debian-science | 3 | {nanoscale-physics-dev} |
+ debian-science | 3 | {electrophysiology} |
+ dxflib | 3 | {engineering-dev} |
jhdf | 3 | {engineering} |
jhdf | 3 | {engineering-dev} |
liblbfgs | 3 | {mathematics-dev} |
libmatheval | 3 | {mathematics-dev} |
- looptools | 3 | {highenergy-physics-dev} |
looptools | 3 | {highenergy-physics} |
- optlang | 3 | {mathematics-dev} |
+ looptools | 3 | {highenergy-physics-dev} |
+ mbtserver | 3 | {linguistics} |
pynac | 3 | {mathematics-dev} |
+ python-escript | 3 | {simulations,numericalcomputation,engineering} |
sardana | 3 | {dataacquisition} |
sollya | 3 | {mathematics-dev} |
sparskit | 3 | {mathematics-dev} |
- ssm | 3 | {nanoscale-physics} |
- tango | 3 | {dataacquisition-dev} |
+ timbl | 3 | {linguistics} |
+ timblserver | 3 | {linguistics} |
x13as | 3 | {economics} |
+ cbflib | 2 | {nanoscale-physics} |
cbflib | 2 | {nanoscale-physics-dev} |
cernlib | 2 | {highenergy-physics} |
clipper | 2 | {nanoscale-physics-dev} |
+ coda | 2 | {meteorology-dev} |
debian-science | 2 | {economics} |
+ debian-science | 2 | {neuroscience-cognitive} |
debian-science | 2 | {physics} |
dune-localfunctions | 2 | {mathematics-dev} |
+ harp | 2 | {meteorology} |
libccp4 | 2 | {nanoscale-physics-dev} |
- libgetdata | 2 | {dataacquisition-dev} |
libvigraimpex | 2 | {imageanalysis-dev,machine-learning} |
ompl | 2 | {robotics-dev} |
+ optlang | 2 | {mathematics-dev} |
+ ssm | 2 | {nanoscale-physics} |
tango | 2 | {dataacquisition-dev} |
apriltag | 1 | {robotics-dev} |
asl | 1 | {physics-dev} |
@@ -175,20 +173,21 @@ Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
frogdata | 1 | {linguistics} |
gemmlowp | 1 | {mathematics-dev} |
itsol | 1 | {mathematics-dev} |
+ libgetdata | 1 | {dataacquisition-dev} |
liborigin2 | 1 | {viewing-dev} |
metis-edf | 1 | {numericalcomputation,engineering} |
mrmpi | 1 | {tools} |
neartree | 1 | {mathematics-dev,numericalcomputation} |
openctm | 1 | {physics-dev} |
openigtlink | 1 | {robotics-dev} |
- openturns | 1 | {statistics,meteorology-dev,mathematics-dev,mathematics,engineering,meteorology} |
openturns | 1 | {engineering-dev,meteorology-dev,mathematics-dev} |
+ openturns | 1 | {statistics,meteorology-dev,mathematics-dev,mathematics,engineering,meteorology} |
psurface | 1 | {numericalcomputation} |
- python-aws-xray-sdk | 1 | {dataacquisition-dev} |
quadrule | 1 | {mathematics-dev} |
robot-testing-framework | 1 | {robotics-dev} |
sollya | 1 | {mathematics-dev} |
tamuanova | 1 | {statistics} |
+ tango | 1 | {dataacquisition-dev} |
tango | 1 | {dataacquisition} |
vlfeat | 1 | {imageanalysis-dev} |
apertium-bel-rus | 0 | {linguistics} |
@@ -222,9 +221,9 @@ Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
apertium-urd-hin | 0 | {linguistics} |
calculix-ccx-doc | 0 | {engineering,numericalcomputation,simulations} |
calculix-ccx-test | 0 | {numericalcomputation,simulations,engineering} |
+ cernlib | 0 | {highenergy-physics-dev} |
cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics,physics} |
- cernlib | 0 | {highenergy-physics-dev} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -250,6 +249,7 @@ Last-Update: Mon, 14 Mar 2022 01:42:04 +0000
ompl | 0 | {robotics} |
openturns | 0 | {meteorology-dev,engineering-dev,mathematics-dev} |
pycollada | 0 | {engineering-dev} |
+ python-aws-xray-sdk | 0 | {dataacquisition-dev} |
python-escript | 0 | {engineering,simulations,numericalcomputation} |
qrupdate | 0 | {mathematics-dev} |
ros-metapackages | 0 | {robotics-dev} |
=====================================
outdated_med-packages.txt
=====================================
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