[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Tue Mar 22 13:42:36 GMT 2022



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
6c52ca7a by Andreas Tille at 2022-03-22T13:42:31+00:00
automatic update

- - - - -


3 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,51 +1,50 @@
-Last-Update: Tue, 22 Mar 2022 01:42:03 +0000
+Last-Update: Tue, 22 Mar 2022 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
  dcmtk                         |    180 | {covid-19,imaging}                                  | 
- orthanc                       |     99 | {imaging,covid-19,practice}                         | 
+ orthanc                       |     98 | {imaging,covid-19,practice}                         | 
  orthanc-wsi                   |     48 | {his,laboratory,covid-19,oncology,practice,imaging} | 
- amide                         |     26 | {imaging}                                           | 
- dicom3tools                   |     25 | {imaging}                                           | 
- dicomscope                    |     25 | {imaging}                                           | 
+ amide                         |     24 | {imaging}                                           | 
+ dicom3tools                   |     24 | {imaging}                                           | 
+ dicomscope                    |     23 | {imaging}                                           | 
  dcm2niix                      |     20 | {imaging}                                           | 
- orthanc-webviewer             |     16 | {imaging}                                           | 
+ orthanc-webviewer             |     15 | {imaging}                                           | 
  gnumed-server                 |     14 | {practice,covid-19}                                 | 
- openslide                     |     12 | {imaging-dev}                                       | 
  gdcm                          |     11 | {imaging-dev}                                       | 
  invesalius                    |     10 | {imaging}                                           | 
- mrtrix3                       |     10 | {imaging}                                           | 
- openslide                     |     10 | {imaging}                                           | 
+ openslide                     |     10 | {imaging-dev}                                       | 
  dicomnifti                    |      9 | {imaging}                                           | 
+ mrtrix3                       |      9 | {imaging}                                           | 
+ openslide                     |      9 | {imaging}                                           | 
  gdcm                          |      8 | {covid-19,imaging}                                  | 
  libminc                       |      7 | {imaging-dev}                                       | 
  minc-tools                    |      7 | {imaging}                                           | 
  nifti2dicom                   |      7 | {imaging}                                           | 
- orthanc-postgresql            |      7 | {imaging}                                           | 
  pixelmed                      |      7 | {imaging}                                           | 
- salmon                        |      7 | {bio,covid-19}                                      | 
  biojava-live                  |      6 | {bio-dev}                                           | 
  nifti2dicom                   |      6 | {imaging}                                           | 
  nifticlib                     |      6 | {imaging-dev}                                       | 
- orthanc-dicomweb              |      6 | {covid-19,imaging}                                  | 
+ orthanc-postgresql            |      6 | {imaging}                                           | 
+ salmon                        |      6 | {bio,covid-19}                                      | 
  king                          |      5 | {imaging,typesetting}                               | 
+ librg-utils-perl              |      5 | {bio}                                               | 
  nifticlib                     |      5 | {imaging}                                           | 
  obitools                      |      5 | {bio}                                               | 
- oscar                         |      5 | {practice,tools,data}                               | 
+ orthanc-dicomweb              |      5 | {covid-19,imaging}                                  | 
  treeview                      |      5 | {bio-phylogeny,bio}                                 | 
  getdata                       |      4 | {bio}                                               | 
  jebl2                         |      4 | {bio-dev}                                           | 
- librg-utils-perl              |      4 | {bio}                                               | 
  libsbml                       |      4 | {bio-dev}                                           | 
- orthanc-mysql                 |      4 | {imaging}                                           | 
+ nipype                        |      4 | {imaging-dev,imaging}                               | 
+ oscar                         |      4 | {practice,tools,data}                               | 
  adun.app                      |      3 | {bio}                                               | 
  blimps                        |      3 | {bio}                                               | 
  dicompyler                    |      3 | {oncology}                                          | 
  ghmm                          |      3 | {bio}                                               | 
  jellyfish1                    |      3 | {bio}                                               | 
- libdivsufsort                 |      3 | {bio-dev}                                           | 
- nipype                        |      3 | {imaging-dev,imaging}                               | 
  orthanc-gdcm                  |      3 | {imaging}                                           | 
+ orthanc-mysql                 |      3 | {imaging}                                           | 
  python-wdlparse               |      3 | {bio-dev}                                           | 
  sift                          |      3 | {bio}                                               | 
  anfo                          |      2 | {bio,cloud}                                         | 
@@ -62,6 +61,7 @@ Last-Update: Tue, 22 Mar 2022 01:42:03 +0000
  gatb-core                     |      2 | {bio}                                               | 
  htscodecs                     |      2 | {covid-19,bio-dev}                                  | 
  lamarc                        |      2 | {bio}                                               | 
+ libdivsufsort                 |      2 | {bio-dev}                                           | 
  libncl                        |      2 | {bio}                                               | 
  melting                       |      2 | {bio,cloud}                                         | 
  mia                           |      2 | {imaging}                                           | 
@@ -72,7 +72,6 @@ Last-Update: Tue, 22 Mar 2022 01:42:03 +0000
  staden                        |      2 | {bio}                                               | 
  zalign                        |      2 | {cloud,bio}                                         | 
  assemblytics                  |      1 | {bio}                                               | 
- bambamc                       |      1 | {bio-dev}                                           | 
  bitseq                        |      1 | {bio}                                               | 
  brig                          |      1 | {bio}                                               | 
  cat-bat                       |      1 | {bio,covid-19}                                      | 
@@ -114,6 +113,7 @@ Last-Update: Tue, 22 Mar 2022 01:42:03 +0000
  tracetuner                    |      1 | {bio}                                               | 
  varna                         |      1 | {bio}                                               | 
  acedb                         |      0 | {cloud,bio}                                         | 
+ bambamc                       |      0 | {bio-dev}                                           | 
  biojava4-live                 |      0 | {bio-dev}                                           | 
  biomaj3-cli                   |      0 | {cloud}                                             | 
  biosyntax                     |      0 | {bio}                                               | 
@@ -170,8 +170,8 @@ Last-Update: Tue, 22 Mar 2022 01:42:03 +0000
  pplacer                       |      0 | {covid-19,bio-phylogeny,bio}                        | 
  proalign                      |      0 | {bio-phylogeny,bio}                                 | 
  pscan-chip                    |      0 | {bio}                                               | 
- python-seqcluster             |      0 | {bio}                                               | 
  python-seqcluster             |      0 | {covid-19,bio-dev}                                  | 
+ python-seqcluster             |      0 | {bio}                                               | 
  qcumber                       |      0 | {bio}                                               | 
  rdp-alignment                 |      0 | {bio}                                               | 
  rdp-classifier                |      0 | {bio}                                               | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,71 +1,70 @@
-Last-Update: Tue, 22 Mar 2022 01:42:04 +0000
+Last-Update: Tue, 22 Mar 2022 13:42:05 +0000
 
       Source                             | Vote   |                    Tasks                                                         |                                Tags                                
 -----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts                                     |   3082 | {viewing}                                                                        | 
- sympy                                   |   1671 | {physics,nanoscale-physics}                                                      | 
- suitesparse                             |    276 | {mathematics-dev,numericalcomputation}                                           | 
- spyder                                  |    223 | {numericalcomputation}                                                           | 
- armadillo                               |    196 | {mathematics-dev}                                                                | 
+ gts                                     |   3061 | {viewing}                                                                        | 
+ sympy                                   |   1685 | {physics,nanoscale-physics}                                                      | 
+ suitesparse                             |    262 | {mathematics-dev,numericalcomputation}                                           | 
+ spyder                                  |    225 | {numericalcomputation}                                                           | 
+ armadillo                               |    200 | {mathematics-dev}                                                                | 
  python-pyqtgraph                        |    141 | {viewing}                                                                        | 
- atlas                                   |     93 | {mathematics-dev}                                                                | 
- cypari2                                 |     54 | {mathematics-dev}                                                                | 
+ atlas                                   |     91 | {mathematics-dev}                                                                | 
+ cypari2                                 |     56 | {mathematics-dev}                                                                | 
  arduino-mk                              |     50 | {robotics}                                                                       | 
- arpack                                  |     48 | {mathematics-dev}                                                                | 
- imview                                  |     47 | {viewing}                                                                        | 
- pyzo                                    |     43 | {numericalcomputation}                                                           | 
- scalapack                               |     35 | {nanoscale-physics-dev}                                                          | 
+ arpack                                  |     47 | {mathematics-dev}                                                                | 
+ pyzo                                    |     45 | {numericalcomputation}                                                           | 
+ imview                                  |     44 | {viewing}                                                                        | 
  flintqs                                 |     34 | {mathematics}                                                                    | 
  rubiks                                  |     34 | {geometry,mathematics}                                                           | 
  eclib                                   |     33 | {mathematics}                                                                    | 
- fftw                                    |     29 | {physics-dev,meteorology-dev,mathematics-dev}                                    | 
- feedgnuplot                             |     22 | {viewing}                                                                        | 
- bossa                                   |     21 | {devices}                                                                        | 
+ fftw                                    |     33 | {physics-dev,meteorology-dev,mathematics-dev}                                    | 
+ feedgnuplot                             |     24 | {viewing}                                                                        | 
+ bossa                                   |     22 | {devices}                                                                        | 
+ scalapack                               |     22 | {nanoscale-physics-dev}                                                          | 
  cernlib                                 |     21 | {highenergy-physics}                                                             | 
- nltk                                    |     21 | {linguistics}                                                                    | 
  sketch                                  |     21 | {typesetting}                                                                    | 
- geg                                     |     20 | {viewing}                                                                        | 
+ nltk                                    |     20 | {linguistics}                                                                    | 
+ geg                                     |     19 | {viewing}                                                                        | 
  gts                                     |     19 | {viewing-dev}                                                                    | 
  ppl                                     |     19 | {numericalcomputation}                                                           | 
- ntl                                     |     18 | {mathematics-dev}                                                                | 
- guidata                                 |     17 | {dataacquisition-dev}                                                            | 
- guiqwt                                  |     17 | {numericalcomputation,viewing}                                                   | 
+ guidata                                 |     18 | {dataacquisition-dev}                                                            | 
+ guiqwt                                  |     18 | {numericalcomputation,viewing}                                                   | 
  neuron                                  |     17 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
- libmatio                                |     15 | {mathematics-dev}                                                                | 
+ ntl                                     |     17 | {mathematics-dev}                                                                | 
+ libmatio                                |     14 | {mathematics-dev}                                                                | 
  matlab-support                          |     14 | {mathematics,numericalcomputation}                                               | 
- opencascade                             |     14 | {simulations}                                                                    | 
  cernlib                                 |     13 | {highenergy-physics-dev}                                                         | 
+ opencascade                             |     13 | {simulations}                                                                    | 
  tango                                   |     13 | {dataacquisition}                                                                | 
+ vitables                                |     13 | {numericalcomputation}                                                           | 
  auto-07p                                |     12 | {mathematics}                                                                    | 
  flann                                   |     12 | {mathematics-dev,engineering-dev}                                                | 
  gfsview                                 |     12 | {viewing}                                                                        | 
- libm4ri                                 |     12 | {mathematics-dev}                                                                | 
- picosat                                 |     12 | {logic}                                                                          | 
+ coinor-symphony                         |     11 | {numericalcomputation,logic,mathematics}                                         | 
+ fftw                                    |     11 | {meteorology-dev,physics-dev,mathematics-dev}                                    | 
+ libm4ri                                 |     11 | {mathematics-dev}                                                                | 
  opticalraytracer                        |     11 | {physics}                                                                        | 
+ picosat                                 |     11 | {logic}                                                                          | 
  ros-ros-environment                     |     11 | {robotics-dev}                                                                   | 
- vitables                                |     11 | {numericalcomputation}                                                           | 
- coinor-symphony                         |     10 | {numericalcomputation,logic,mathematics}                                         | 
  form                                    |     10 | {mathematics}                                                                    | 
  mathgl                                  |     10 | {viewing}                                                                        | 
  neuron                                  |     10 | {highenergy-physics-dev}                                                         | 
  cliquer                                 |      9 | {mathematics}                                                                    | 
- lxi-tools                               |      9 | {engineering,dataacquisition}                                                    | 
  pcl                                     |      9 | {robotics-dev}                                                                   | 
+ rheolef                                 |      9 | {mathematics}                                                                    | 
  ros-rosconsole                          |      9 | {robotics-dev}                                                                   | 
  tango                                   |      9 | {dataacquisition}                                                                | 
  uctodata                                |      9 | {linguistics}                                                                    | 
  urdfdom-headers                         |      9 | {robotics-dev}                                                                   | 
- fftw                                    |      8 | {meteorology-dev,physics-dev,mathematics-dev}                                    | 
- rheolef                                 |      8 | {mathematics}                                                                    | 
+ lxi-tools                               |      8 | {engineering,dataacquisition}                                                    | 
  simbody                                 |      8 | {robotics-dev}                                                                   | 
  ucto                                    |      8 | {linguistics}                                                                    | 
  apophenia                               |      7 | {statistics}                                                                     | 
  dune-uggrid                             |      7 | {mathematics-dev}                                                                | 
- eclib                                   |      7 | {mathematics-dev}                                                                | 
  getdp                                   |      7 | {engineering,mathematics,simulations}                                            | 
  ipe-tools                               |      7 | {typesetting}                                                                    | 
+ libitpp                                 |      7 | {engineering-dev,mathematics-dev}                                                | 
  libvigraimpex                           |      7 | {machine-learning,imageanalysis-dev}                                             | 
- lrcalc                                  |      7 | {mathematics-dev}                                                                | 
  muparser                                |      7 | {mathematics-dev}                                                                | 
  polylib                                 |      7 | {mathematics}                                                                    | 
  astk                                    |      6 | {engineering}                                                                    | 
@@ -73,12 +72,14 @@ Last-Update: Tue, 22 Mar 2022 01:42:04 +0000
  code-saturne                            |      6 | {engineering-dev,mathematics-dev}                                                | 
  coinmp                                  |      6 | {logic,mathematics-dev,numericalcomputation}                                     | 
  dxsamples                               |      6 | {nanoscale-physics}                                                              | 
- libitpp                                 |      6 | {engineering-dev,mathematics-dev}                                                | 
+ eclib                                   |      6 | {mathematics-dev}                                                                | 
  libm4rie                                |      6 | {mathematics-dev}                                                                | 
  libzn-poly                              |      6 | {mathematics-dev}                                                                | 
+ lrcalc                                  |      6 | {mathematics-dev}                                                                | 
  opencascade                             |      6 | {simulations}                                                                    | 
  scram                                   |      6 | {engineering}                                                                    | 
  syrthes                                 |      6 | {engineering}                                                                    | 
+ toulbar2                                |      6 | {logic,physics,mathematics,numericalcomputation}                                 | 
  alberta                                 |      5 | {engineering-dev}                                                                | 
  cliquer                                 |      5 | {mathematics-dev}                                                                | 
  debian-science                          |      5 | {physics,nanoscale-physics,machine-learning,economics,mathematics}               | 
@@ -91,11 +92,11 @@ Last-Update: Tue, 22 Mar 2022 01:42:04 +0000
  lrcalc                                  |      5 | {mathematics}                                                                    | 
  neuron                                  |      5 | {highenergy-physics-dev}                                                         | 
  openstereogram                          |      5 | {tools}                                                                          | 
- toulbar2                                |      5 | {logic,physics,mathematics,numericalcomputation}                                 | 
  cernlib                                 |      4 | {highenergy-physics}                                                             | 
  coda                                    |      4 | {meteorology}                                                                    | 
- debian-science                          |      4 | {physics,nanoscale-physics,statistics,economics}                                 | 
+ debian-science                          |      4 | {nanoscale-physics,machine-learning,physics,economics}                           | 
  debian-science                          |      4 | {neuroscience-cognitive,machine-learning}                                        | 
+ debian-science                          |      4 | {physics,nanoscale-physics,statistics,economics}                                 | 
  etsf-io                                 |      4 | {nanoscale-physics,physics}                                                      | 
  gf2x                                    |      4 | {mathematics-dev}                                                                | 
  libcgns                                 |      4 | {engineering-dev}                                                                | 
@@ -106,21 +107,21 @@ Last-Update: Tue, 22 Mar 2022 01:42:04 +0000
  ratpoints                               |      4 | {mathematics-dev}                                                                | 
  taurus                                  |      4 | {dataacquisition}                                                                | 
  teem                                    |      4 | {imageanalysis}                                                                  | 
- debian-science                          |      3 | {nanoscale-physics,machine-learning,physics,economics}                           | 
  dimbl                                   |      3 | {linguistics}                                                                    | 
  dune-localfunctions                     |      3 | {mathematics-dev}                                                                | 
  frog                                    |      3 | {linguistics}                                                                    | 
  hpcc                                    |      3 | {distributedcomputing,numericalcomputation}                                      | 
  irstlm                                  |      3 | {linguistics}                                                                    | 
  jeuclid                                 |      3 | {typesetting,viewing}                                                            | 
- libgetdata                              |      3 | {dataacquisition-dev}                                                            | 
  libgetdata                              |      3 | {dataacquisition}                                                                | 
+ libgetdata                              |      3 | {dataacquisition-dev}                                                            | 
  liblxi                                  |      3 | {engineering-dev,dataacquisition-dev}                                            | 
  libmatheval                             |      3 | {mathematics-dev}                                                                | 
  mbt                                     |      3 | {linguistics}                                                                    | 
  morse-simulator                         |      3 | {robotics}                                                                       | 
  openmx                                  |      3 | {nanoscale-physics,physics}                                                      | 
  optlang                                 |      3 | {mathematics-dev}                                                                | 
+ psurface                                |      3 | {numericalcomputation}                                                           | 
  python-escript                          |      3 | {simulations,numericalcomputation,engineering}                                   | 
  sardana                                 |      3 | {dataacquisition}                                                                | 
  sollya                                  |      3 | {mathematics-dev}                                                                | 
@@ -134,14 +135,14 @@ Last-Update: Tue, 22 Mar 2022 01:42:04 +0000
  clipper                                 |      2 | {nanoscale-physics-dev}                                                          | 
  coda                                    |      2 | {meteorology-dev}                                                                | 
  code-saturne                            |      2 | {engineering-dev,mathematics-dev}                                                | 
- debian-science                          |      2 | {electrophysiology}                                                              | 
- debian-science                          |      2 | {tools}                                                                          | 
  debian-science                          |      2 | {psychophysics}                                                                  | 
+ debian-science                          |      2 | {tools}                                                                          | 
  debian-science                          |      2 | {physics}                                                                        | 
+ debian-science                          |      2 | {electrophysiology}                                                              | 
  dxflib                                  |      2 | {engineering-dev}                                                                | 
  harp                                    |      2 | {meteorology}                                                                    | 
- jhdf                                    |      2 | {engineering-dev}                                                                | 
  jhdf                                    |      2 | {engineering}                                                                    | 
+ jhdf                                    |      2 | {engineering-dev}                                                                | 
  libccp4                                 |      2 | {nanoscale-physics-dev}                                                          | 
  liblbfgs                                |      2 | {mathematics-dev}                                                                | 
  libvigraimpex                           |      2 | {imageanalysis-dev,machine-learning}                                             | 
@@ -150,7 +151,6 @@ Last-Update: Tue, 22 Mar 2022 01:42:04 +0000
  mbtserver                               |      2 | {linguistics}                                                                    | 
  openctm                                 |      2 | {physics-dev}                                                                    | 
  openigtlink                             |      2 | {robotics-dev}                                                                   | 
- psurface                                |      2 | {numericalcomputation}                                                           | 
  pynac                                   |      2 | {mathematics-dev}                                                                | 
  sparskit                                |      2 | {mathematics-dev}                                                                | 
  tango                                   |      2 | {dataacquisition-dev}                                                            | 
@@ -217,8 +217,8 @@ Last-Update: Tue, 22 Mar 2022 01:42:04 +0000
  apertium-urd-hin                        |      0 | {linguistics}                                                                    | 
  calculix-ccx-doc                        |      0 | {engineering,numericalcomputation,simulations}                                   | 
  calculix-ccx-test                       |      0 | {numericalcomputation,simulations,engineering}                                   | 
- cernlib                                 |      0 | {highenergy-physics}                                                             | 
  cernlib                                 |      0 | {highenergy-physics-dev}                                                         | 
+ cernlib                                 |      0 | {highenergy-physics}                                                             | 
  cernlib                                 |      0 | {highenergy-physics,physics}                                                     | 
  ckon                                    |      0 | {highenergy-physics-dev}                                                         | 
  clhep                                   |      0 | {highenergy-physics-dev}                                                         | 
@@ -241,16 +241,16 @@ Last-Update: Tue, 22 Mar 2022 01:42:04 +0000
  libxsmm                                 |      0 | {mathematics-dev}                                                                | 
  looptools                               |      0 | {highenergy-physics-dev}                                                         | 
  mclibs                                  |      0 | {highenergy-physics}                                                             | 
- metis-edf                               |      0 | {numericalcomputation,engineering}                                               | 
  metis-edf                               |      0 | {engineering-dev}                                                                | 
+ metis-edf                               |      0 | {numericalcomputation,engineering}                                               | 
  ompl                                    |      0 | {robotics}                                                                       | 
  openturns                               |      0 | {meteorology-dev,engineering-dev,mathematics-dev}                                | 
  python-aws-xray-sdk                     |      0 | {dataacquisition-dev}                                                            | 
  python-escript                          |      0 | {engineering,simulations,numericalcomputation}                                   | 
  qrupdate                                |      0 | {mathematics-dev}                                                                | 
  robot-testing-framework                 |      0 | {robotics-dev}                                                                   | 
- ros-metapackages                        |      0 | {robotics-dev}                                                                   | 
  ros-metapackages                        |      0 | {robotics}                                                                       | 
+ ros-metapackages                        |      0 | {robotics-dev}                                                                   | 
  ros-opencv-apps                         |      0 | {robotics}                                                                       | 
  sagemath-database-combinatorial-designs |      0 | {mathematics}                                                                    | 
  sagemath-database-conway-polynomials    |      0 | {mathematics}                                                                    | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/6c52ca7a42ee04539e2e5d2430d3ee601bc2dbb8

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