Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
710ace8e by Andreas Tille at 2022-05-02T13:42:23+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,73 +1,70 @@
-Last-Update: Mon, 02 May 2022 01:42:03 +0000
+Last-Update: Mon, 02 May 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 171 | {imaging,covid-19} |
orthanc | 101 | {imaging,covid-19,practice} |
- orthanc-wsi | 52 | {laboratory,practice,imaging,covid-19,oncology,his} |
- amide | 23 | {imaging} |
- dicom3tools | 23 | {imaging} |
+ orthanc-wsi | 51 | {laboratory,practice,imaging,covid-19,oncology,his} |
+ amide | 25 | {imaging} |
dcm2niix | 21 | {imaging} |
- dicomscope | 20 | {imaging} |
- orthanc-webviewer | 18 | {imaging} |
- orthanc-dicomweb | 13 | {covid-19,imaging} |
- mrtrix3 | 12 | {imaging} |
+ dicom3tools | 21 | {imaging} |
+ dicomscope | 21 | {imaging} |
+ orthanc-webviewer | 16 | {imaging} |
+ mrtrix3 | 13 | {imaging} |
gnumed-server | 11 | {practice,covid-19} |
minc-tools | 11 | {imaging} |
+ nipype | 11 | {imaging,imaging-dev} |
+ orthanc-dicomweb | 11 | {covid-19,imaging} |
gdcm | 10 | {imaging-dev} |
invesalius | 10 | {imaging} |
- nipype | 10 | {imaging,imaging-dev} |
- oscar | 10 | {data,practice,tools} |
dicomnifti | 9 | {imaging} |
openslide | 9 | {imaging-dev} |
- orthanc-mysql | 9 | {imaging} |
- orthanc-postgresql | 9 | {imaging} |
- dicompyler | 8 | {oncology} |
+ oscar | 9 | {data,practice,tools} |
gdcm | 8 | {imaging,covid-19} |
- mia | 8 | {imaging} |
- nifti2dicom | 8 | {imaging} |
- pixelmed | 8 | {imaging} |
- treeview | 8 | {bio,bio-phylogeny} |
+ orthanc-mysql | 8 | {imaging} |
biojava-live | 7 | {bio-dev} |
+ mia | 7 | {imaging} |
nifti2dicom | 7 | {imaging} |
- obitools | 7 | {bio} |
- orthanc-gdcm | 7 | {imaging} |
- plastimatch | 7 | {imaging} |
+ openslide | 7 | {imaging} |
+ orthanc-postgresql | 7 | {imaging} |
+ pixelmed | 7 | {imaging} |
+ treeview | 7 | {bio,bio-phylogeny} |
+ dicompyler | 6 | {oncology} |
getdata | 6 | {bio} |
jebl2 | 6 | {bio-dev} |
libncl | 6 | {bio} |
librg-utils-perl | 6 | {bio} |
nifticlib | 6 | {imaging} |
- openslide | 6 | {imaging} |
+ obitools | 6 | {bio} |
+ plastimatch | 6 | {imaging} |
runcircos-gui | 6 | {bio} |
stacks | 6 | {bio} |
adun.app | 5 | {bio} |
canu | 5 | {bio} |
- embassy-domsearch | 5 | {cloud,bio} |
- ghmm | 5 | {bio} |
- lamarc | 5 | {bio} |
+ orthanc-gdcm | 5 | {imaging} |
saint | 5 | {bio} |
salmon | 5 | {bio,covid-19} |
staden | 5 | {bio} |
bio-tradis | 4 | {bio-dev,bio} |
- bitseq | 4 | {bio} |
blimps | 4 | {bio} |
cmtk | 4 | {imaging} |
- embassy-domainatrix | 4 | {bio,cloud} |
+ embassy-domsearch | 4 | {cloud,bio} |
+ ghmm | 4 | {bio} |
ipig | 4 | {bio} |
king | 4 | {imaging,typesetting} |
+ lamarc | 4 | {bio} |
libminc | 4 | {imaging-dev} |
mauve-aligner | 4 | {bio} |
melting | 4 | {bio,cloud} |
mhap | 4 | {bio-ngs,bio} |
phyutility | 4 | {cloud,bio} |
piler | 4 | {bio} |
- rtax | 4 | {cloud,bio} |
sift | 4 | {bio} |
spread-phy | 4 | {bio-phylogeny,bio} |
anfo | 3 | {bio,cloud} |
arden | 3 | {bio,cloud} |
beast-mcmc | 3 | {bio,bio-phylogeny} |
+ bitseq | 3 | {bio} |
brig | 3 | {bio} |
cat-bat | 3 | {covid-19,bio} |
clonalframeml | 3 | {bio,covid-19} |
@@ -75,6 +72,7 @@ Last-Update: Mon, 02 May 2022 01:42:03 +0000
delly | 3 | {covid-19,bio} |
dextractor | 3 | {covid-19,bio} |
elastix | 3 | {imaging} |
+ embassy-domainatrix | 3 | {bio,cloud} |
embassy-domalign | 3 | {cloud,bio} |
fastml | 3 | {bio} |
gatb-core | 3 | {bio} |
@@ -91,6 +89,7 @@ Last-Update: Mon, 02 May 2022 01:42:03 +0000
pscan-chip | 3 | {bio} |
qcumber | 3 | {bio} |
rdp-classifier | 3 | {bio} |
+ rtax | 3 | {cloud,bio} |
sga | 3 | {bio} |
sibsim4 | 3 | {cloud,bio} |
soapaligner | 3 | {bio} |
@@ -103,7 +102,6 @@ Last-Update: Mon, 02 May 2022 01:42:03 +0000
zalign | 3 | {cloud,bio} |
assemblytics | 2 | {bio} |
bart-view | 2 | {imaging} |
- biomaj3-cli | 2 | {cloud} |
cufflinks | 2 | {bio,cloud} |
emboss-explorer | 2 | {bio} |
emmax | 2 | {bio} |
@@ -123,6 +121,7 @@ Last-Update: Mon, 02 May 2022 01:42:03 +0000
thesias | 2 | {bio,covid-19} |
tophat-recondition | 2 | {covid-19,bio} |
trace2dbest | 2 | {bio} |
+ biomaj3-cli | 1 | {cloud} |
htscodecs | 1 | {covid-19,bio-dev} |
libchado-perl | 1 | {bio-dev} |
libctapimkt | 1 | {practice} |
@@ -197,5 +196,5 @@ Last-Update: Mon, 02 May 2022 01:42:03 +0000
malt | -1 | {bio} |
megan-ce | -1 | {bio} |
rockhopper | -1 | {bio} |
-(225 rows)
+(224 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,94 +1,97 @@
-Last-Update: Mon, 02 May 2022 01:42:04 +0000
+Last-Update: Mon, 02 May 2022 13:42:05 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 3052 | {viewing} |
- sympy | 1721 | {physics,nanoscale-physics} |
+ gts | 3017 | {viewing} |
+ sympy | 1741 | {physics,nanoscale-physics} |
suitesparse | 251 | {mathematics-dev,numericalcomputation} |
armadillo | 217 | {mathematics-dev} |
- python-pyqtgraph | 135 | {viewing} |
- atlas | 90 | {mathematics-dev} |
+ python-pyqtgraph | 128 | {viewing} |
+ atlas | 89 | {mathematics-dev} |
nltk | 81 | {linguistics} |
- arpack | 58 | {mathematics-dev} |
- cypari2 | 54 | {mathematics-dev} |
+ arpack | 60 | {mathematics-dev} |
+ cypari2 | 53 | {mathematics-dev} |
imview | 48 | {viewing} |
arduino-mk | 44 | {robotics} |
rubiks | 38 | {geometry,mathematics} |
- fftw | 35 | {mathematics-dev,meteorology-dev,physics-dev} |
- flintqs | 32 | {mathematics} |
+ fftw | 36 | {mathematics-dev,meteorology-dev,physics-dev} |
+ flintqs | 33 | {mathematics} |
+ eclib | 32 | {mathematics} |
pyzo | 32 | {numericalcomputation} |
- eclib | 31 | {mathematics} |
+ scalapack | 25 | {nanoscale-physics-dev} |
feedgnuplot | 24 | {viewing} |
- scalapack | 24 | {nanoscale-physics-dev} |
+ geg | 21 | {viewing} |
guidata | 21 | {dataacquisition-dev} |
guiqwt | 21 | {numericalcomputation,viewing} |
sketch | 21 | {typesetting} |
- vitables | 21 | {numericalcomputation} |
- geg | 20 | {viewing} |
+ vitables | 20 | {numericalcomputation} |
bossa | 19 | {devices} |
- gts | 19 | {viewing-dev} |
+ neuron | 19 | {neuroscience-modeling,highenergy-physics,simulations} |
cernlib | 18 | {highenergy-physics} |
- neuron | 18 | {neuroscience-modeling,highenergy-physics,simulations} |
- gfsview | 17 | {viewing} |
+ gts | 18 | {viewing-dev} |
coinor-symphony | 16 | {mathematics,logic,numericalcomputation} |
fftw | 16 | {mathematics-dev,meteorology-dev,physics-dev} |
+ gfsview | 16 | {viewing} |
+ flann | 15 | {mathematics-dev,engineering-dev} |
ntl | 15 | {mathematics-dev} |
cernlib | 14 | {highenergy-physics-dev} |
libmatio | 14 | {mathematics-dev} |
picosat | 14 | {logic} |
- ros-ros-environment | 14 | {robotics-dev} |
auto-07p | 13 | {mathematics} |
- flann | 13 | {mathematics-dev,engineering-dev} |
form | 13 | {mathematics} |
mathgl | 13 | {viewing} |
+ neuron | 13 | {highenergy-physics-dev} |
opencascade | 13 | {simulations} |
- ppl | 13 | {numericalcomputation} |
- neuron | 12 | {highenergy-physics-dev} |
+ libm4ri | 12 | {mathematics-dev} |
+ ppl | 12 | {numericalcomputation} |
+ ros-ros-environment | 12 | {robotics-dev} |
apophenia | 11 | {statistics} |
- debian-science | 11 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
getdp | 11 | {engineering,simulations,mathematics} |
- libm4ri | 11 | {mathematics-dev} |
opticalraytracer | 11 | {physics} |
- rheolef | 11 | {mathematics} |
ros-rosconsole | 11 | {robotics-dev} |
tango | 11 | {dataacquisition} |
toulbar2 | 11 | {mathematics,numericalcomputation,logic,physics} |
uctodata | 11 | {linguistics} |
- debian-science | 10 | {nanoscale-physics,economics,physics,machine-learning} |
- matlab-support | 10 | {mathematics,numericalcomputation} |
+ debian-science | 10 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
polylib | 10 | {mathematics} |
- teem | 10 | {imageanalysis} |
+ rheolef | 10 | {mathematics} |
ucto | 10 | {linguistics} |
debian-science | 9 | {physics,nanoscale-physics,economics,statistics} |
+ debian-science | 9 | {nanoscale-physics,economics,physics,machine-learning} |
jeuclid | 9 | {viewing,typesetting} |
- libcgns | 9 | {engineering} |
lxi-tools | 9 | {engineering,dataacquisition} |
pcl | 9 | {robotics-dev} |
- psurface | 9 | {numericalcomputation} |
+ teem | 9 | {imageanalysis} |
libitpp | 8 | {mathematics-dev,engineering-dev} |
+ matlab-support | 8 | {mathematics,numericalcomputation} |
syrthes | 8 | {engineering} |
tango | 8 | {dataacquisition} |
- astk | 7 | {engineering} |
- code-saturne | 7 | {mathematics-dev,engineering-dev} |
- debian-science | 7 | {machine-learning,neuroscience-cognitive} |
+ cliquer | 7 | {mathematics} |
+ dune-uggrid | 7 | {mathematics-dev} |
ipe-tools | 7 | {typesetting} |
+ libcgns | 7 | {engineering} |
lrcalc | 7 | {mathematics} |
+ psurface | 7 | {numericalcomputation} |
python-escript | 7 | {numericalcomputation,engineering,simulations} |
- scram | 7 | {engineering} |
+ astk | 6 | {engineering} |
cimg | 6 | {imageanalysis-dev} | {x11::library}
- cliquer | 6 | {mathematics} |
- debian-science | 6 | {electrophysiology} |
- dune-uggrid | 6 | {mathematics-dev} |
+ code-saturne | 6 | {mathematics-dev,engineering-dev} |
+ debian-science | 6 | {machine-learning,neuroscience-cognitive} |
dxsamples | 6 | {nanoscale-physics} |
etsf-io | 6 | {nanoscale-physics,physics} |
frog | 6 | {linguistics} |
libvigraimpex | 6 | {imageanalysis-dev,machine-learning} |
+ scram | 6 | {engineering} |
alberta | 5 | {engineering-dev} |
- debian-science | 5 | {tools} |
+ cliquer | 5 | {mathematics-dev} |
+ debian-science | 5 | {electrophysiology} |
dimbl | 5 | {linguistics} |
dune-istl | 5 | {mathematics-dev} |
+ eclib | 5 | {mathematics-dev} |
irstlm | 5 | {linguistics} |
libgetdata | 5 | {dataacquisition} |
+ libm4rie | 5 | {mathematics-dev} |
+ libzn-poly | 5 | {mathematics-dev} |
mbt | 5 | {linguistics} |
morse-simulator | 5 | {robotics} |
neuron | 5 | {highenergy-physics-dev} |
@@ -100,14 +103,14 @@ Last-Update: Mon, 02 May 2022 01:42:04 +0000
cbflib | 4 | {nanoscale-physics} |
cernlib | 4 | {highenergy-physics} |
clhep | 4 | {highenergy-physics-dev} |
- cliquer | 4 | {mathematics-dev} |
- coda | 4 | {meteorology-dev} |
coinmp | 4 | {numericalcomputation,logic,mathematics-dev} |
+ debian-science | 4 | {tools} |
debian-science | 4 | {psychophysics} |
- eclib | 4 | {mathematics-dev} |
- libm4rie | 4 | {mathematics-dev} |
+ gf2x | 4 | {mathematics-dev} |
+ iml | 4 | {mathematics-dev} |
+ libhomfly | 4 | {mathematics-dev} |
libmatheval | 4 | {mathematics} |
- libzn-poly | 4 | {mathematics-dev} |
+ lrcalc | 4 | {mathematics-dev} |
mbtserver | 4 | {linguistics} |
mrmpi | 4 | {tools} |
muparser | 4 | {mathematics-dev} |
@@ -119,19 +122,17 @@ Last-Update: Mon, 02 May 2022 01:42:04 +0000
urdfdom-headers | 4 | {robotics-dev} |
x13as | 4 | {economics} |
coda | 3 | {meteorology} |
- debian-science | 3 | {electrophysiology} |
+ coda | 3 | {meteorology-dev} |
debian-science | 3 | {nanoscale-physics-dev} |
+ debian-science | 3 | {electrophysiology} |
dune-localfunctions | 3 | {mathematics-dev} |
dxflib | 3 | {engineering-dev} |
- gf2x | 3 | {mathematics-dev} |
- iml | 3 | {mathematics-dev} |
ipe-tools | 3 | {typesetting} |
libgtkdatabox | 3 | {engineering-dev,viewing-dev} |
- libhomfly | 3 | {mathematics-dev} |
libmatheval | 3 | {mathematics-dev} |
looptools | 3 | {highenergy-physics} |
- lrcalc | 3 | {mathematics-dev} |
openstereogram | 3 | {tools} |
+ ratpoints | 3 | {mathematics-dev} |
sardana | 3 | {dataacquisition} |
tango | 3 | {dataacquisition-dev} |
apophenia | 2 | {statistics} |
@@ -141,12 +142,10 @@ Last-Update: Mon, 02 May 2022 01:42:04 +0000
fastjet | 2 | {highenergy-physics-dev} |
harp | 2 | {meteorology} |
hpcc | 2 | {numericalcomputation,distributedcomputing} |
- libccp4 | 2 | {nanoscale-physics-dev} |
libcgns | 2 | {engineering-dev} |
libgetdata | 2 | {dataacquisition-dev} |
looptools | 2 | {highenergy-physics-dev} |
newmat | 2 | {mathematics-dev} |
- ratpoints | 2 | {mathematics-dev} |
cernlib | 1 | {highenergy-physics} |
ckon | 1 | {highenergy-physics-dev} |
clipper | 1 | {nanoscale-physics-dev} |
@@ -156,6 +155,7 @@ Last-Update: Mon, 02 May 2022 01:42:04 +0000
dune-functions | 1 | {mathematics-dev} |
dune-typetree | 1 | {mathematics-dev} |
frogdata | 1 | {linguistics} |
+ libccp4 | 1 | {nanoscale-physics-dev} |
libgetdata | 1 | {dataacquisition-dev} |
liblbfgs | 1 | {mathematics-dev} |
liblxi | 1 | {dataacquisition-dev,engineering-dev} |
@@ -207,9 +207,9 @@ Last-Update: Mon, 02 May 2022 01:42:04 +0000
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
cbflib | 0 | {nanoscale-physics-dev} |
+ cernlib | 0 | {highenergy-physics,physics} |
cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics-dev} |
- cernlib | 0 | {highenergy-physics,physics} |
cld2 | 0 | {linguistics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -240,8 +240,8 @@ Last-Update: Mon, 02 May 2022 01:42:04 +0000
metis-edf | 0 | {engineering-dev} |
neartree | 0 | {numericalcomputation,mathematics-dev} |
ompl | 0 | {robotics} |
- openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
openturns | 0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
+ openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
psurface | 0 | {numericalcomputation} |
python-aws-xray-sdk | 0 | {dataacquisition-dev} |
qrupdate | 0 | {mathematics-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/710ace8e6debd61d7a4ac2d2bc15a9f17981a719
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/710ace8e6debd61d7a4ac2d2bc15a9f17981a719
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