Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
33ca4dfb by Andreas Tille at 2022-05-09T13:42:38+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,35 +1,33 @@
-Last-Update: Mon, 09 May 2022 01:42:04 +0000
+Last-Update: Mon, 09 May 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 169 | {imaging,covid-19} |
- orthanc | 102 | {imaging,covid-19,practice} |
- orthanc-wsi | 53 | {laboratory,practice,imaging,covid-19,oncology,his} |
+ dcmtk | 165 | {imaging,covid-19} |
+ orthanc | 101 | {imaging,covid-19,practice} |
+ orthanc-wsi | 52 | {laboratory,practice,imaging,covid-19,oncology,his} |
amide | 27 | {imaging} |
- dicom3tools | 23 | {imaging} |
dicomscope | 23 | {imaging} |
+ dicom3tools | 22 | {imaging} |
dcm2niix | 19 | {imaging} |
- orthanc-webviewer | 17 | {imaging} |
- minc-tools | 14 | {imaging} |
- gdcm | 13 | {imaging-dev} |
- orthanc-dicomweb | 12 | {covid-19,imaging} |
+ orthanc-webviewer | 16 | {imaging} |
+ gdcm | 14 | {imaging-dev} |
+ minc-tools | 13 | {imaging} |
+ mrtrix3 | 12 | {imaging} |
invesalius | 11 | {imaging} |
- mrtrix3 | 11 | {imaging} |
+ nipype | 11 | {imaging,imaging-dev} |
openslide | 11 | {imaging-dev} |
+ orthanc-dicomweb | 11 | {covid-19,imaging} |
gnumed-server | 10 | {practice,covid-19} |
- nipype | 10 | {imaging,imaging-dev} |
+ oscar | 10 | {data,practice,tools} |
gdcm | 9 | {imaging,covid-19} |
- oscar | 9 | {data,practice,tools} |
dicomnifti | 8 | {imaging} |
- mia | 8 | {imaging} |
nifti2dicom | 8 | {imaging} |
openslide | 8 | {imaging} |
pixelmed | 8 | {imaging} |
adun.app | 7 | {bio} |
librg-utils-perl | 7 | {bio} |
+ mia | 7 | {imaging} |
nifticlib | 7 | {imaging} |
- orthanc-mysql | 7 | {imaging} |
- orthanc-postgresql | 7 | {imaging} |
plastimatch | 7 | {imaging} |
treeview | 7 | {bio,bio-phylogeny} |
biojava-live | 6 | {bio-dev} |
@@ -37,11 +35,12 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
getdata | 6 | {bio} |
jebl2 | 6 | {bio-dev} |
libminc | 6 | {imaging-dev} |
+ orthanc-mysql | 6 | {imaging} |
+ orthanc-postgresql | 6 | {imaging} |
stacks | 6 | {bio} |
libncl | 5 | {bio} |
nifticlib | 5 | {imaging-dev} |
obitools | 5 | {bio} |
- orthanc-gdcm | 5 | {imaging} |
runcircos-gui | 5 | {bio} |
saint | 5 | {bio} |
salmon | 5 | {bio,covid-19} |
@@ -52,6 +51,7 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
ghmm | 4 | {bio} |
lamarc | 4 | {bio} |
melting | 4 | {bio,cloud} |
+ orthanc-gdcm | 4 | {imaging} |
phyutility | 4 | {cloud,bio} |
piler | 4 | {bio} |
spread-phy | 4 | {bio-phylogeny,bio} |
@@ -80,7 +80,6 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
mauve-aligner | 3 | {bio} |
metaphlan2 | 3 | {bio} |
mhap | 3 | {bio-ngs,bio} |
- orthanc-python | 3 | {covid-19} |
placnet | 3 | {bio} |
plasmidseeker | 3 | {bio} |
proalign | 3 | {bio,bio-phylogeny} |
@@ -102,7 +101,6 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
zalign | 3 | {cloud,bio} |
assemblytics | 2 | {bio} |
bart-view | 2 | {imaging} |
- cufflinks | 2 | {bio,cloud} |
embassy-domainatrix | 2 | {bio,cloud} |
embassy-domalign | 2 | {cloud,bio} |
emboss-explorer | 2 | {bio} |
@@ -112,6 +110,7 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
libsbml | 2 | {bio-dev} |
microbegps | 2 | {bio} |
opencfu | 2 | {laboratory} |
+ orthanc-python | 2 | {covid-19} |
pigx-rnaseq | 2 | {covid-19,bio} |
pique | 2 | {bio} |
plasmidid | 2 | {covid-19,bio} |
@@ -125,6 +124,7 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
tophat-recondition | 2 | {covid-19,bio} |
biomaj3-cli | 1 | {cloud} |
ctn | 1 | {imaging-dev} |
+ cufflinks | 1 | {bio,cloud} |
gatb-core | 1 | {bio-dev} |
htscodecs | 1 | {covid-19,bio-dev} |
libchado-perl | 1 | {bio-dev} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,57 +1,57 @@
-Last-Update: Mon, 09 May 2022 01:42:04 +0000
+Last-Update: Mon, 09 May 2022 13:42:05 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 2972 | {viewing} |
- sympy | 1846 | {physics,nanoscale-physics} |
- suitesparse | 257 | {mathematics-dev,numericalcomputation} |
- armadillo | 219 | {mathematics-dev} |
- python-pyqtgraph | 125 | {viewing} |
- atlas | 90 | {mathematics-dev} |
+ gts | 2970 | {viewing} |
+ sympy | 1849 | {physics,nanoscale-physics} |
+ suitesparse | 259 | {mathematics-dev,numericalcomputation} |
+ armadillo | 220 | {mathematics-dev} |
+ python-pyqtgraph | 123 | {viewing} |
+ atlas | 87 | {mathematics-dev} |
nltk | 84 | {linguistics} |
- arpack | 57 | {mathematics-dev} |
+ arpack | 60 | {mathematics-dev} |
cypari2 | 49 | {mathematics-dev} |
- arduino-mk | 47 | {robotics} |
- imview | 45 | {viewing} |
+ arduino-mk | 46 | {robotics} |
+ imview | 43 | {viewing} |
pyzo | 40 | {numericalcomputation} |
- rubiks | 37 | {geometry,mathematics} |
- scalapack | 37 | {nanoscale-physics-dev} |
+ rubiks | 38 | {geometry,mathematics} |
+ scalapack | 38 | {nanoscale-physics-dev} |
fftw | 33 | {mathematics-dev,meteorology-dev,physics-dev} |
eclib | 30 | {mathematics} |
flintqs | 30 | {mathematics} |
sketch | 23 | {typesetting} |
feedgnuplot | 22 | {viewing} |
bossa | 21 | {devices} |
+ cernlib | 20 | {highenergy-physics} |
gts | 20 | {viewing-dev} |
- cernlib | 19 | {highenergy-physics} |
guidata | 19 | {dataacquisition-dev} |
guiqwt | 19 | {numericalcomputation,viewing} |
libmatio | 19 | {mathematics-dev} |
- vitables | 19 | {numericalcomputation} |
- neuron | 18 | {neuroscience-modeling,highenergy-physics,simulations} |
+ vitables | 18 | {numericalcomputation} |
flann | 17 | {mathematics-dev,engineering-dev} |
geg | 17 | {viewing} |
gfsview | 17 | {viewing} |
+ neuron | 17 | {neuroscience-modeling,highenergy-physics,simulations} |
+ cernlib | 16 | {highenergy-physics-dev} |
coinor-symphony | 16 | {mathematics,logic,numericalcomputation} |
auto-07p | 15 | {mathematics} |
- cernlib | 15 | {highenergy-physics-dev} |
- ros-ros-environment | 15 | {robotics-dev} |
ntl | 14 | {mathematics-dev} |
+ ros-ros-environment | 14 | {robotics-dev} |
fftw | 13 | {mathematics-dev,meteorology-dev,physics-dev} |
form | 13 | {mathematics} |
mathgl | 13 | {viewing} |
opencascade | 13 | {simulations} |
- neuron | 12 | {highenergy-physics-dev} |
opticalraytracer | 12 | {physics} |
+ tango | 12 | {dataacquisition} |
ucto | 12 | {linguistics} |
uctodata | 12 | {linguistics} |
- apophenia | 11 | {statistics} |
getdp | 11 | {engineering,simulations,mathematics} |
libm4ri | 11 | {mathematics-dev} |
+ neuron | 11 | {highenergy-physics-dev} |
picosat | 11 | {logic} |
ppl | 11 | {numericalcomputation} |
- tango | 11 | {dataacquisition} |
toulbar2 | 11 | {mathematics,numericalcomputation,logic,physics} |
+ apophenia | 10 | {statistics} |
lxi-tools | 10 | {engineering,dataacquisition} |
matlab-support | 10 | {mathematics,numericalcomputation} |
pcl | 10 | {robotics-dev} |
@@ -60,14 +60,13 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
rheolef | 10 | {mathematics} |
ros-rosconsole | 10 | {robotics-dev} |
debian-science | 9 | {nanoscale-physics,economics,physics,machine-learning} |
+ tango | 9 | {dataacquisition} |
debian-science | 8 | {physics,nanoscale-physics,economics,statistics} |
debian-science | 8 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
jeuclid | 8 | {viewing,typesetting} |
libcgns | 8 | {engineering} |
lrcalc | 8 | {mathematics} |
syrthes | 8 | {engineering} |
- tango | 8 | {dataacquisition} |
- teem | 8 | {imageanalysis} |
cliquer | 7 | {mathematics} |
code-saturne | 7 | {mathematics-dev,engineering-dev} |
eclib | 7 | {mathematics-dev} |
@@ -76,6 +75,7 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
ipe-tools | 7 | {typesetting} |
muparser | 7 | {mathematics-dev} |
scram | 7 | {engineering} |
+ teem | 7 | {imageanalysis} |
astk | 6 | {engineering} |
cimg | 6 | {imageanalysis-dev} | {x11::library}
debian-science | 6 | {machine-learning,neuroscience-cognitive} |
@@ -103,17 +103,16 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
sac2mseed | 5 | {geography} |
simbody | 5 | {robotics-dev} |
timbl | 5 | {linguistics} |
- urdfdom-headers | 5 | {robotics-dev} |
apertium-streamparser | 4 | {linguistics} |
cernlib | 4 | {highenergy-physics} |
clhep | 4 | {highenergy-physics-dev} |
cliquer | 4 | {mathematics-dev} |
- coda | 4 | {meteorology} |
coda | 4 | {meteorology-dev} |
+ coda | 4 | {meteorology} |
coinmp | 4 | {numericalcomputation,logic,mathematics-dev} |
debian-science | 4 | {nanoscale-physics-dev} |
- debian-science | 4 | {tools} |
debian-science | 4 | {psychophysics} |
+ debian-science | 4 | {tools} |
iml | 4 | {mathematics-dev} |
libmatheval | 4 | {mathematics-dev} |
mbtserver | 4 | {linguistics} |
@@ -125,6 +124,7 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
tango | 4 | {dataacquisition-dev} |
taurus | 4 | {dataacquisition} |
timblserver | 4 | {linguistics} |
+ urdfdom-headers | 4 | {robotics-dev} |
x13as | 4 | {economics} |
cernlib | 3 | {highenergy-physics} |
debian-science | 3 | {electrophysiology} |
@@ -141,10 +141,9 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
sardana | 3 | {dataacquisition} |
tango | 3 | {dataacquisition-dev} |
apophenia | 2 | {statistics} |
- cernlib | 2 | {highenergy-physics} |
clipper | 2 | {nanoscale-physics-dev} |
- debian-science | 2 | {physics} |
debian-science | 2 | {economics} |
+ debian-science | 2 | {physics} |
fastjet | 2 | {highenergy-physics-dev} |
harp | 2 | {meteorology} |
libccp4 | 2 | {nanoscale-physics-dev} |
@@ -219,9 +218,9 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
apriltag | 0 | {robotics-dev} |
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
+ cernlib | 0 | {highenergy-physics,physics} |
cernlib | 0 | {highenergy-physics-dev} |
cernlib | 0 | {highenergy-physics} |
- cernlib | 0 | {highenergy-physics,physics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
code-saturne | 0 | {engineering} |
@@ -232,8 +231,8 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
fastjet | 0 | {highenergy-physics-dev} |
frogdata | 0 | {linguistics} |
glpk-java | 0 | {mathematics-dev} |
- jhdf | 0 | {engineering} |
jhdf | 0 | {engineering-dev} |
+ jhdf | 0 | {engineering} |
libdogleg | 0 | {mathematics-dev} |
libfolia | 0 | {linguistics} |
libgetdata | 0 | {dataacquisition-dev} |
@@ -249,8 +248,8 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
psurface | 0 | {numericalcomputation} |
qrupdate | 0 | {mathematics-dev} |
robot-testing-framework | 0 | {robotics-dev} |
- ros-metapackages | 0 | {robotics-dev} |
ros-metapackages | 0 | {robotics} |
+ ros-metapackages | 0 | {robotics-dev} |
sagemath-database-combinatorial-designs | 0 | {mathematics} |
sagemath-database-conway-polynomials | 0 | {mathematics} |
sagemath-database-elliptic-curves | 0 | {mathematics} |
@@ -262,5 +261,5 @@ Last-Update: Mon, 09 May 2022 01:42:04 +0000
triangle | 0 | {physics-dev} |
trilinos | 0 | {physics-dev,mathematics-dev,engineering-dev} |
visp-images | 0 | {robotics-dev} |
-(294 rows)
+(293 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/33ca4dfbe1c1ff38cd8ff95d5b0bff5c40873228
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/33ca4dfbe1c1ff38cd8ff95d5b0bff5c40873228
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