[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Tue May 10 14:42:29 BST 2022



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
f02fb6dc by Andreas Tille at 2022-05-10T13:42:24+00:00
automatic update

- - - - -


3 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,28 +1,28 @@
-Last-Update: Tue, 10 May 2022 01:42:03 +0000
+Last-Update: Tue, 10 May 2022 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    165 | {imaging,covid-19}                                  | 
- orthanc                       |    101 | {imaging,covid-19,practice}                         | 
+ dcmtk                         |    166 | {imaging,covid-19}                                  | 
+ orthanc                       |    102 | {imaging,covid-19,practice}                         | 
  orthanc-wsi                   |     52 | {laboratory,practice,imaging,covid-19,oncology,his} | 
  amide                         |     27 | {imaging}                                           | 
  dicomscope                    |     23 | {imaging}                                           | 
- dicom3tools                   |     22 | {imaging}                                           | 
- dcm2niix                      |     19 | {imaging}                                           | 
+ dicom3tools                   |     21 | {imaging}                                           | 
+ dcm2niix                      |     20 | {imaging}                                           | 
  orthanc-webviewer             |     16 | {imaging}                                           | 
  gdcm                          |     14 | {imaging-dev}                                       | 
  minc-tools                    |     13 | {imaging}                                           | 
- mrtrix3                       |     12 | {imaging}                                           | 
+ openslide                     |     12 | {imaging-dev}                                       | 
  invesalius                    |     11 | {imaging}                                           | 
- nipype                        |     11 | {imaging,imaging-dev}                               | 
- openslide                     |     11 | {imaging-dev}                                       | 
+ mrtrix3                       |     11 | {imaging}                                           | 
  orthanc-dicomweb              |     11 | {covid-19,imaging}                                  | 
  gnumed-server                 |     10 | {practice,covid-19}                                 | 
- oscar                         |     10 | {data,practice,tools}                               | 
+ nipype                        |     10 | {imaging,imaging-dev}                               | 
  gdcm                          |      9 | {imaging,covid-19}                                  | 
+ openslide                     |      9 | {imaging}                                           | 
+ oscar                         |      9 | {data,practice,tools}                               | 
  dicomnifti                    |      8 | {imaging}                                           | 
  nifti2dicom                   |      8 | {imaging}                                           | 
- openslide                     |      8 | {imaging}                                           | 
  pixelmed                      |      8 | {imaging}                                           | 
  adun.app                      |      7 | {bio}                                               | 
  librg-utils-perl              |      7 | {bio}                                               | 
@@ -35,11 +35,11 @@ Last-Update: Tue, 10 May 2022 01:42:03 +0000
  getdata                       |      6 | {bio}                                               | 
  jebl2                         |      6 | {bio-dev}                                           | 
  libminc                       |      6 | {imaging-dev}                                       | 
+ nifticlib                     |      6 | {imaging-dev}                                       | 
  orthanc-mysql                 |      6 | {imaging}                                           | 
  orthanc-postgresql            |      6 | {imaging}                                           | 
  stacks                        |      6 | {bio}                                               | 
  libncl                        |      5 | {bio}                                               | 
- nifticlib                     |      5 | {imaging-dev}                                       | 
  obitools                      |      5 | {bio}                                               | 
  runcircos-gui                 |      5 | {bio}                                               | 
  saint                         |      5 | {bio}                                               | 
@@ -126,12 +126,12 @@ Last-Update: Tue, 10 May 2022 01:42:03 +0000
  ctn                           |      1 | {imaging-dev}                                       | 
  cufflinks                     |      1 | {bio,cloud}                                         | 
  gatb-core                     |      1 | {bio-dev}                                           | 
+ gifticlib                     |      1 | {imaging-dev}                                       | 
  htscodecs                     |      1 | {covid-19,bio-dev}                                  | 
  libchado-perl                 |      1 | {bio-dev}                                           | 
  libctapimkt                   |      1 | {practice}                                          | 
  libgenome                     |      1 | {bio-dev}                                           | 
  mssstest                      |      1 | {tools}                                             | 
- papyrus                       |      1 | {imaging-dev}                                       | 
  seq-gen                       |      1 | {bio}                                               | 
  srf                           |      1 | {bio-dev}                                           | 
  varna                         |      1 | {bio}                                               | 
@@ -145,7 +145,6 @@ Last-Update: Tue, 10 May 2022 01:42:03 +0000
  eegdev                        |      0 | {imaging-dev}                                       | 
  emperor                       |      0 | {bio}                                               | 
  fis-gtm                       |      0 | {his}                                               | 
- gifticlib                     |      0 | {imaging-dev}                                       | 
  insighttoolkit5               |      0 | {imaging-dev}                                       | 
  libbigwig                     |      0 | {bio-dev}                                           | 
  libbioparser-dev              |      0 | {bio-dev}                                           | 
@@ -179,10 +178,11 @@ Last-Update: Tue, 10 May 2022 01:42:03 +0000
  nifticlib                     |      0 | {imaging-dev}                                       | 
  opensurgsim                   |      0 | {imaging-dev}                                       | 
  orthanc-imagej                |      0 | {imaging}                                           | 
+ papyrus                       |      0 | {imaging-dev}                                       | 
  pbcopper                      |      0 | {bio-dev}                                           | 
  pbseqlib                      |      0 | {bio-dev}                                           | 
- python-seqcluster             |      0 | {covid-19,bio-dev}                                  | 
  python-seqcluster             |      0 | {bio}                                               | 
+ python-seqcluster             |      0 | {covid-19,bio-dev}                                  | 
  resfinder-db                  |      0 | {bio}                                               | 
  sbmltoolbox                   |      0 | {bio-dev}                                           | 
  sight                         |      0 | {imaging-dev}                                       | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,82 +1,82 @@
-Last-Update: Tue, 10 May 2022 01:42:04 +0000
+Last-Update: Tue, 10 May 2022 13:42:06 +0000
 
       Source                             | Vote   |                    Tasks                                                         |                                Tags                                
 -----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts                                     |   2970 | {viewing}                                                                        | 
- sympy                                   |   1849 | {physics,nanoscale-physics}                                                      | 
- suitesparse                             |    259 | {mathematics-dev,numericalcomputation}                                           | 
- armadillo                               |    220 | {mathematics-dev}                                                                | 
+ gts                                     |   2949 | {viewing}                                                                        | 
+ sympy                                   |   1842 | {physics,nanoscale-physics}                                                      | 
+ suitesparse                             |    264 | {mathematics-dev,numericalcomputation}                                           | 
+ armadillo                               |    217 | {mathematics-dev}                                                                | 
  python-pyqtgraph                        |    123 | {viewing}                                                                        | 
  atlas                                   |     87 | {mathematics-dev}                                                                | 
  nltk                                    |     84 | {linguistics}                                                                    | 
- arpack                                  |     60 | {mathematics-dev}                                                                | 
+ arpack                                  |     63 | {mathematics-dev}                                                                | 
  cypari2                                 |     49 | {mathematics-dev}                                                                | 
- arduino-mk                              |     46 | {robotics}                                                                       | 
- imview                                  |     43 | {viewing}                                                                        | 
+ arduino-mk                              |     48 | {robotics}                                                                       | 
+ imview                                  |     44 | {viewing}                                                                        | 
  pyzo                                    |     40 | {numericalcomputation}                                                           | 
- rubiks                                  |     38 | {geometry,mathematics}                                                           | 
- scalapack                               |     38 | {nanoscale-physics-dev}                                                          | 
- fftw                                    |     33 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
+ scalapack                               |     39 | {nanoscale-physics-dev}                                                          | 
+ rubiks                                  |     37 | {geometry,mathematics}                                                           | 
+ fftw                                    |     35 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
  eclib                                   |     30 | {mathematics}                                                                    | 
  flintqs                                 |     30 | {mathematics}                                                                    | 
  sketch                                  |     23 | {typesetting}                                                                    | 
+ bossa                                   |     22 | {devices}                                                                        | 
  feedgnuplot                             |     22 | {viewing}                                                                        | 
- bossa                                   |     21 | {devices}                                                                        | 
  cernlib                                 |     20 | {highenergy-physics}                                                             | 
  gts                                     |     20 | {viewing-dev}                                                                    | 
+ libmatio                                |     20 | {mathematics-dev}                                                                | 
  guidata                                 |     19 | {dataacquisition-dev}                                                            | 
  guiqwt                                  |     19 | {numericalcomputation,viewing}                                                   | 
- libmatio                                |     19 | {mathematics-dev}                                                                | 
  vitables                                |     18 | {numericalcomputation}                                                           | 
  flann                                   |     17 | {mathematics-dev,engineering-dev}                                                | 
  geg                                     |     17 | {viewing}                                                                        | 
  gfsview                                 |     17 | {viewing}                                                                        | 
  neuron                                  |     17 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
+ auto-07p                                |     16 | {mathematics}                                                                    | 
  cernlib                                 |     16 | {highenergy-physics-dev}                                                         | 
  coinor-symphony                         |     16 | {mathematics,logic,numericalcomputation}                                         | 
- auto-07p                                |     15 | {mathematics}                                                                    | 
+ fftw                                    |     15 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
  ntl                                     |     14 | {mathematics-dev}                                                                | 
  ros-ros-environment                     |     14 | {robotics-dev}                                                                   | 
- fftw                                    |     13 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
  form                                    |     13 | {mathematics}                                                                    | 
  mathgl                                  |     13 | {viewing}                                                                        | 
- opencascade                             |     13 | {simulations}                                                                    | 
- opticalraytracer                        |     12 | {physics}                                                                        | 
+ opencascade                             |     12 | {simulations}                                                                    | 
  tango                                   |     12 | {dataacquisition}                                                                | 
  ucto                                    |     12 | {linguistics}                                                                    | 
  uctodata                                |     12 | {linguistics}                                                                    | 
  getdp                                   |     11 | {engineering,simulations,mathematics}                                            | 
  libm4ri                                 |     11 | {mathematics-dev}                                                                | 
  neuron                                  |     11 | {highenergy-physics-dev}                                                         | 
+ opticalraytracer                        |     11 | {physics}                                                                        | 
  picosat                                 |     11 | {logic}                                                                          | 
  ppl                                     |     11 | {numericalcomputation}                                                           | 
+ python-escript                          |     11 | {numericalcomputation,engineering,simulations}                                   | 
  toulbar2                                |     11 | {mathematics,numericalcomputation,logic,physics}                                 | 
  apophenia                               |     10 | {statistics}                                                                     | 
  lxi-tools                               |     10 | {engineering,dataacquisition}                                                    | 
  matlab-support                          |     10 | {mathematics,numericalcomputation}                                               | 
  pcl                                     |     10 | {robotics-dev}                                                                   | 
- polylib                                 |     10 | {mathematics}                                                                    | 
- python-escript                          |     10 | {numericalcomputation,engineering,simulations}                                   | 
  rheolef                                 |     10 | {mathematics}                                                                    | 
- ros-rosconsole                          |     10 | {robotics-dev}                                                                   | 
+ debian-science                          |      9 | {nanoscale-physics,mathematics,physics,economics,machine-learning}               | 
  debian-science                          |      9 | {nanoscale-physics,economics,physics,machine-learning}                           | 
+ polylib                                 |      9 | {mathematics}                                                                    | 
+ ros-rosconsole                          |      9 | {robotics-dev}                                                                   | 
  tango                                   |      9 | {dataacquisition}                                                                | 
- debian-science                          |      8 | {physics,nanoscale-physics,economics,statistics}                                 | 
- debian-science                          |      8 | {nanoscale-physics,mathematics,physics,economics,machine-learning}               | 
  jeuclid                                 |      8 | {viewing,typesetting}                                                            | 
  libcgns                                 |      8 | {engineering}                                                                    | 
  lrcalc                                  |      8 | {mathematics}                                                                    | 
+ muparser                                |      8 | {mathematics-dev}                                                                | 
  syrthes                                 |      8 | {engineering}                                                                    | 
+ astk                                    |      7 | {engineering}                                                                    | 
  cliquer                                 |      7 | {mathematics}                                                                    | 
  code-saturne                            |      7 | {mathematics-dev,engineering-dev}                                                | 
+ debian-science                          |      7 | {physics,nanoscale-physics,economics,statistics}                                 | 
  eclib                                   |      7 | {mathematics-dev}                                                                | 
  etsf-io                                 |      7 | {nanoscale-physics,physics}                                                      | 
  frog                                    |      7 | {linguistics}                                                                    | 
  ipe-tools                               |      7 | {typesetting}                                                                    | 
- muparser                                |      7 | {mathematics-dev}                                                                | 
  scram                                   |      7 | {engineering}                                                                    | 
  teem                                    |      7 | {imageanalysis}                                                                  | 
- astk                                    |      6 | {engineering}                                                                    | 
  cimg                                    |      6 | {imageanalysis-dev}                                                              | {x11::library}
  debian-science                          |      6 | {machine-learning,neuroscience-cognitive}                                        | 
  dune-uggrid                             |      6 | {mathematics-dev}                                                                | 
@@ -107,12 +107,12 @@ Last-Update: Tue, 10 May 2022 01:42:04 +0000
  cernlib                                 |      4 | {highenergy-physics}                                                             | 
  clhep                                   |      4 | {highenergy-physics-dev}                                                         | 
  cliquer                                 |      4 | {mathematics-dev}                                                                | 
- coda                                    |      4 | {meteorology-dev}                                                                | 
  coda                                    |      4 | {meteorology}                                                                    | 
+ coda                                    |      4 | {meteorology-dev}                                                                | 
  coinmp                                  |      4 | {numericalcomputation,logic,mathematics-dev}                                     | 
- debian-science                          |      4 | {nanoscale-physics-dev}                                                          | 
- debian-science                          |      4 | {psychophysics}                                                                  | 
  debian-science                          |      4 | {tools}                                                                          | 
+ debian-science                          |      4 | {psychophysics}                                                                  | 
+ debian-science                          |      4 | {nanoscale-physics-dev}                                                          | 
  iml                                     |      4 | {mathematics-dev}                                                                | 
  libmatheval                             |      4 | {mathematics-dev}                                                                | 
  mbtserver                               |      4 | {linguistics}                                                                    | 
@@ -121,7 +121,6 @@ Last-Update: Tue, 10 May 2022 01:42:04 +0000
  qd                                      |      4 | {mathematics-dev}                                                                | 
  qwtplot3d                               |      4 | {viewing-dev}                                                                    | 
  ratpoints                               |      4 | {mathematics-dev}                                                                | 
- tango                                   |      4 | {dataacquisition-dev}                                                            | 
  taurus                                  |      4 | {dataacquisition}                                                                | 
  timblserver                             |      4 | {linguistics}                                                                    | 
  urdfdom-headers                         |      4 | {robotics-dev}                                                                   | 
@@ -155,6 +154,7 @@ Last-Update: Tue, 10 May 2022 01:42:04 +0000
  metis-edf                               |      2 | {numericalcomputation,engineering}                                               | 
  sparskit                                |      2 | {mathematics-dev}                                                                | 
  ssm                                     |      2 | {nanoscale-physics}                                                              | 
+ tango                                   |      2 | {dataacquisition-dev}                                                            | 
  asl                                     |      1 | {physics-dev}                                                                    | 
  cbflib                                  |      1 | {nanoscale-physics-dev}                                                          | 
  ckon                                    |      1 | {highenergy-physics-dev}                                                         | 
@@ -173,8 +173,6 @@ Last-Update: Tue, 10 May 2022 01:42:04 +0000
  ompl                                    |      1 | {robotics-dev}                                                                   | 
  openctm                                 |      1 | {physics-dev}                                                                    | 
  openigtlink                             |      1 | {robotics-dev}                                                                   | 
- openturns                               |      1 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} | 
- openturns                               |      1 | {engineering-dev,meteorology-dev,mathematics-dev}                                | 
  pycollada                               |      1 | {engineering-dev}                                                                | 
  pynac                                   |      1 | {mathematics-dev}                                                                | 
  python-aws-xray-sdk                     |      1 | {dataacquisition-dev}                                                            | 
@@ -218,9 +216,9 @@ Last-Update: Tue, 10 May 2022 01:42:04 +0000
  apriltag                                |      0 | {robotics-dev}                                                                   | 
  calculix-ccx-doc                        |      0 | {simulations,numericalcomputation,engineering}                                   | 
  calculix-ccx-test                       |      0 | {simulations,engineering,numericalcomputation}                                   | 
+ cernlib                                 |      0 | {highenergy-physics}                                                             | 
  cernlib                                 |      0 | {highenergy-physics,physics}                                                     | 
  cernlib                                 |      0 | {highenergy-physics-dev}                                                         | 
- cernlib                                 |      0 | {highenergy-physics}                                                             | 
  clhep                                   |      0 | {highenergy-physics-dev}                                                         | 
  coda                                    |      0 | {meteorology-dev}                                                                | 
  code-saturne                            |      0 | {engineering}                                                                    | 
@@ -231,8 +229,8 @@ Last-Update: Tue, 10 May 2022 01:42:04 +0000
  fastjet                                 |      0 | {highenergy-physics-dev}                                                         | 
  frogdata                                |      0 | {linguistics}                                                                    | 
  glpk-java                               |      0 | {mathematics-dev}                                                                | 
- jhdf                                    |      0 | {engineering-dev}                                                                | 
  jhdf                                    |      0 | {engineering}                                                                    | 
+ jhdf                                    |      0 | {engineering-dev}                                                                | 
  libdogleg                               |      0 | {mathematics-dev}                                                                | 
  libfolia                                |      0 | {linguistics}                                                                    | 
  libgetdata                              |      0 | {dataacquisition-dev}                                                            | 
@@ -244,6 +242,8 @@ Last-Update: Tue, 10 May 2022 01:42:04 +0000
  mclibs                                  |      0 | {highenergy-physics}                                                             | 
  metis-edf                               |      0 | {engineering-dev}                                                                | 
  ompl                                    |      0 | {robotics}                                                                       | 
+ openturns                               |      0 | {engineering-dev,meteorology-dev,mathematics-dev}                                | 
+ openturns                               |      0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} | 
  openturns                               |      0 | {engineering-dev,mathematics-dev,meteorology-dev}                                | 
  psurface                                |      0 | {numericalcomputation}                                                           | 
  qrupdate                                |      0 | {mathematics-dev}                                                                | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f02fb6dcb136bc06c108b0043dec2c4b228cf3a0

-- 
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