Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
1e1125cf by Andreas Tille at 2022-05-14T13:42:56+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,13 +1,13 @@
-Last-Update: Sat, 14 May 2022 01:42:04 +0000
+Last-Update: Sat, 14 May 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 162 | {imaging,covid-19} |
- orthanc | 96 | {imaging,covid-19,practice} |
+ dcmtk | 163 | {imaging,covid-19} |
+ orthanc | 95 | {imaging,covid-19,practice} |
orthanc-wsi | 49 | {laboratory,practice,imaging,covid-19,oncology,his} |
amide | 27 | {imaging} |
- dicomscope | 26 | {imaging} |
- dcm2niix | 19 | {imaging} |
+ dicomscope | 25 | {imaging} |
+ dcm2niix | 20 | {imaging} |
dicom3tools | 19 | {imaging} |
gdcm | 14 | {imaging-dev} |
openslide | 13 | {imaging-dev} |
@@ -25,41 +25,45 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
dicomnifti | 7 | {imaging} |
dicompyler | 7 | {oncology} |
librg-utils-perl | 7 | {bio} |
- nifti2dicom | 7 | {imaging} |
orthanc-dicomweb | 7 | {covid-19,imaging} |
plastimatch | 7 | {imaging} |
+ biojava-live | 6 | {bio-dev} |
jebl2 | 6 | {bio-dev} |
libminc | 6 | {imaging-dev} |
mia | 6 | {imaging} |
nifti2dicom | 6 | {imaging} |
- nifticlib | 6 | {imaging-dev} |
nifticlib | 6 | {imaging} |
+ nifticlib | 6 | {imaging-dev} |
treeview | 6 | {bio,bio-phylogeny} |
- biojava-live | 5 | {bio-dev} |
getdata | 5 | {bio} |
+ nifti2dicom | 5 | {imaging} |
obitools | 5 | {bio} |
orthanc-mysql | 5 | {imaging} |
+ salmon | 5 | {bio,covid-19} |
stacks | 5 | {bio} |
- bio-tradis | 4 | {bio-dev,bio} |
libncl | 4 | {bio} |
orthanc-postgresql | 4 | {imaging} |
+ phyutility | 4 | {cloud,bio} |
runcircos-gui | 4 | {bio} |
saint | 4 | {bio} |
- salmon | 4 | {bio,covid-19} |
+ sibsim4 | 4 | {cloud,bio} |
staden | 4 | {bio} |
+ bio-tradis | 3 | {bio-dev,bio} |
blimps | 3 | {bio} |
+ canu | 3 | {bio} |
cmtk | 3 | {imaging} |
- elastix | 3 | {imaging} |
+ fastml | 3 | {bio} |
ghmm | 3 | {bio} |
king | 3 | {imaging,typesetting} |
lamarc | 3 | {bio} |
libdivsufsort | 3 | {bio-dev} |
+ mauve-aligner | 3 | {bio} |
melting | 3 | {bio,cloud} |
+ mhap | 3 | {bio-ngs,bio} |
orthanc-gdcm | 3 | {imaging} |
- phyutility | 3 | {cloud,bio} |
piler | 3 | {bio} |
+ proalign | 3 | {bio,bio-phylogeny} |
rambo-k | 3 | {bio} |
- sibsim4 | 3 | {cloud,bio} |
sift | 3 | {bio} |
spread-phy | 3 | {bio-phylogeny,bio} |
anfo | 2 | {bio,cloud} |
@@ -69,14 +73,11 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
beast-mcmc | 2 | {bio,bio-phylogeny} |
bitseq | 2 | {bio} |
brig | 2 | {bio} |
- canu | 2 | {bio} |
- cat-bat | 2 | {covid-19,bio} |
clonalframeml | 2 | {bio,covid-19} |
clonalorigin | 2 | {bio} |
+ cufflinks | 2 | {bio,cloud} |
delly | 2 | {covid-19,bio} |
- dextractor | 2 | {covid-19,bio} |
- embassy-domsearch | 2 | {cloud,bio} |
- fastml | 2 | {bio} |
+ elastix | 2 | {imaging} |
gatb-core | 2 | {bio} |
hinge | 2 | {bio} |
ipig | 2 | {bio} |
@@ -85,13 +86,10 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
libpal-java | 2 | {bio-dev} |
librdp-taxonomy-tree-java | 2 | {bio-dev} |
libsbml | 2 | {bio-dev} |
- mauve-aligner | 2 | {bio} |
metaphlan2 | 2 | {bio} |
- mhap | 2 | {bio-ngs,bio} |
opencfu | 2 | {laboratory} |
placnet | 2 | {bio} |
plasmidseeker | 2 | {bio} |
- proalign | 2 | {bio,bio-phylogeny} |
pscan-chip | 2 | {bio} |
pymia | 2 | {imaging-dev} |
python-wdlparse | 2 | {bio-dev} |
@@ -110,10 +108,12 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
tvc | 2 | {bio} |
zalign | 2 | {cloud,bio} |
biomaj3-cli | 1 | {cloud} |
+ cat-bat | 1 | {covid-19,bio} |
ctn | 1 | {imaging-dev} |
- cufflinks | 1 | {bio,cloud} |
+ dextractor | 1 | {covid-19,bio} |
embassy-domainatrix | 1 | {bio,cloud} |
embassy-domalign | 1 | {cloud,bio} |
+ embassy-domsearch | 1 | {cloud,bio} |
emboss-explorer | 1 | {bio} |
emmax | 1 | {bio} |
gatb-core | 1 | {bio-dev} |
@@ -181,8 +181,8 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
papyrus | 0 | {imaging-dev} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
sight | 0 | {imaging-dev} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,59 +1,58 @@
-Last-Update: Sat, 14 May 2022 01:42:04 +0000
+Last-Update: Sat, 14 May 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 2944 | {viewing} |
- sympy | 1819 | {physics,nanoscale-physics} |
- suitesparse | 274 | {mathematics-dev,numericalcomputation} |
- armadillo | 218 | {mathematics-dev} |
- python-pyqtgraph | 126 | {viewing} |
- atlas | 86 | {mathematics-dev} |
- nltk | 81 | {linguistics} |
- arpack | 70 | {mathematics-dev} |
+ gts | 2940 | {viewing} |
+ sympy | 1809 | {physics,nanoscale-physics} |
+ suitesparse | 271 | {mathematics-dev,numericalcomputation} |
+ armadillo | 209 | {mathematics-dev} |
+ python-pyqtgraph | 122 | {viewing} |
+ atlas | 85 | {mathematics-dev} |
+ nltk | 80 | {linguistics} |
+ arpack | 71 | {mathematics-dev} |
+ cypari2 | 49 | {mathematics-dev} |
arduino-mk | 47 | {robotics} |
- cypari2 | 47 | {mathematics-dev} |
- pyzo | 44 | {numericalcomputation} |
- imview | 43 | {viewing} |
+ imview | 44 | {viewing} |
scalapack | 41 | {nanoscale-physics-dev} |
- fftw | 36 | {mathematics-dev,meteorology-dev,physics-dev} |
+ pyzo | 39 | {numericalcomputation} |
rubiks | 36 | {geometry,mathematics} |
+ fftw | 33 | {mathematics-dev,meteorology-dev,physics-dev} |
flintqs | 29 | {mathematics} |
eclib | 28 | {mathematics} |
- sketch | 24 | {typesetting} |
- bossa | 23 | {devices} |
- libmatio | 22 | {mathematics-dev} |
+ bossa | 24 | {devices} |
+ sketch | 23 | {typesetting} |
+ libmatio | 21 | {mathematics-dev} |
cernlib | 20 | {highenergy-physics} |
feedgnuplot | 20 | {viewing} |
- gts | 18 | {viewing-dev} |
- guidata | 17 | {dataacquisition-dev} |
- guiqwt | 17 | {numericalcomputation,viewing} |
- vitables | 17 | {numericalcomputation} |
+ guidata | 18 | {dataacquisition-dev} |
+ guiqwt | 18 | {numericalcomputation,viewing} |
+ gts | 17 | {viewing-dev} |
coinor-symphony | 16 | {mathematics,logic,numericalcomputation} |
- fftw | 16 | {mathematics-dev,meteorology-dev,physics-dev} |
- flann | 16 | {mathematics-dev,engineering-dev} |
geg | 16 | {viewing} |
gfsview | 16 | {viewing} |
neuron | 16 | {neuroscience-modeling,highenergy-physics,simulations} |
+ vitables | 16 | {numericalcomputation} |
auto-07p | 15 | {mathematics} |
+ fftw | 15 | {mathematics-dev,meteorology-dev,physics-dev} |
+ flann | 15 | {mathematics-dev,engineering-dev} |
+ ros-ros-environment | 15 | {robotics-dev} |
cernlib | 14 | {highenergy-physics-dev} |
- ros-ros-environment | 14 | {robotics-dev} |
+ python-escript | 14 | {numericalcomputation,engineering,simulations} |
mathgl | 13 | {viewing} |
ntl | 13 | {mathematics-dev} |
- python-escript | 13 | {numericalcomputation,engineering,simulations} |
- form | 12 | {mathematics} |
+ matlab-support | 12 | {mathematics,numericalcomputation} |
toulbar2 | 12 | {mathematics,numericalcomputation,logic,physics} |
apophenia | 11 | {statistics} |
getdp | 11 | {engineering,simulations,mathematics} |
neuron | 11 | {highenergy-physics-dev} |
+ opticalraytracer | 11 | {physics} |
picosat | 11 | {logic} |
ppl | 11 | {numericalcomputation} |
rheolef | 11 | {mathematics} |
- tango | 11 | {dataacquisition} |
debian-science | 10 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
+ form | 10 | {mathematics} |
libm4ri | 10 | {mathematics-dev} |
- matlab-support | 10 | {mathematics,numericalcomputation} |
opencascade | 10 | {simulations} |
- opticalraytracer | 10 | {physics} |
ucto | 10 | {linguistics} |
uctodata | 10 | {linguistics} |
debian-science | 9 | {nanoscale-physics,economics,physics,machine-learning} |
@@ -62,14 +61,14 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
polylib | 9 | {mathematics} |
tango | 9 | {dataacquisition} |
debian-science | 8 | {physics,nanoscale-physics,economics,statistics} |
- jeuclid | 8 | {viewing,typesetting} |
lrcalc | 8 | {mathematics} |
muparser | 8 | {mathematics-dev} |
psurface | 8 | {numericalcomputation} |
+ ros-rosconsole | 8 | {robotics-dev} |
+ tango | 8 | {dataacquisition} |
astk | 7 | {engineering} |
eclib | 7 | {mathematics-dev} |
- libcgns | 7 | {engineering} |
- ros-rosconsole | 7 | {robotics-dev} |
+ jeuclid | 7 | {viewing,typesetting} |
syrthes | 7 | {engineering} |
teem | 7 | {imageanalysis} |
cimg | 6 | {imageanalysis-dev} | {x11::library}
@@ -81,10 +80,9 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
etsf-io | 6 | {nanoscale-physics,physics} |
frog | 6 | {linguistics} |
ipe-tools | 6 | {typesetting} |
+ libcgns | 6 | {engineering} |
libmatheval | 6 | {mathematics} |
lrcalc | 6 | {mathematics-dev} |
- alberta | 5 | {engineering-dev} |
- cbflib | 5 | {nanoscale-physics} |
coinmp | 5 | {numericalcomputation,logic,mathematics-dev} |
debian-science | 5 | {electrophysiology} |
dune-istl | 5 | {mathematics-dev} |
@@ -92,13 +90,14 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
libitpp | 5 | {mathematics-dev,engineering-dev} |
libvigraimpex | 5 | {imageanalysis-dev,machine-learning} |
morse-simulator | 5 | {robotics} |
+ neuron | 5 | {highenergy-physics-dev} |
opencascade | 5 | {simulations} |
scram | 5 | {engineering} |
simbody | 5 | {robotics-dev} |
urdfdom-headers | 5 | {robotics-dev} |
+ alberta | 4 | {engineering-dev} |
+ cbflib | 4 | {nanoscale-physics} |
cernlib | 4 | {highenergy-physics} |
- coda | 4 | {meteorology} |
- coda | 4 | {meteorology-dev} |
debian-science | 4 | {tools} |
dimbl | 4 | {linguistics} |
gf2x | 4 | {mathematics-dev} |
@@ -108,7 +107,6 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
libmatheval | 4 | {mathematics-dev} |
libzn-poly | 4 | {mathematics-dev} |
mbt | 4 | {linguistics} |
- neuron | 4 | {highenergy-physics-dev} |
openmx | 4 | {physics,nanoscale-physics} |
qwtplot3d | 4 | {viewing-dev} |
ratpoints | 4 | {mathematics-dev} |
@@ -117,10 +115,11 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
x13as | 4 | {economics} |
apertium-streamparser | 3 | {linguistics} |
cernlib | 3 | {highenergy-physics} |
- clhep | 3 | {highenergy-physics-dev} |
cliquer | 3 | {mathematics-dev} |
- debian-science | 3 | {nanoscale-physics-dev} |
+ coda | 3 | {meteorology} |
+ coda | 3 | {meteorology-dev} |
debian-science | 3 | {psychophysics} |
+ debian-science | 3 | {nanoscale-physics-dev} |
dune-localfunctions | 3 | {mathematics-dev} |
dxflib | 3 | {engineering-dev} |
hpcc | 3 | {numericalcomputation,distributedcomputing} |
@@ -140,10 +139,12 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
tango | 3 | {dataacquisition-dev} |
timblserver | 3 | {linguistics} |
apophenia | 2 | {statistics} |
+ cernlib | 2 | {highenergy-physics} |
+ clhep | 2 | {highenergy-physics-dev} |
clipper | 2 | {nanoscale-physics-dev} |
debian-science | 2 | {electrophysiology} |
- debian-science | 2 | {economics} |
debian-science | 2 | {physics} |
+ debian-science | 2 | {economics} |
harp | 2 | {meteorology} |
libccp4 | 2 | {nanoscale-physics-dev} |
libcgns | 2 | {engineering-dev} |
@@ -207,9 +208,9 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
apriltag | 0 | {robotics-dev} |
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
- cernlib | 0 | {highenergy-physics,physics} |
- cernlib | 0 | {highenergy-physics-dev} |
cernlib | 0 | {highenergy-physics} |
+ cernlib | 0 | {highenergy-physics-dev} |
+ cernlib | 0 | {highenergy-physics,physics} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -235,8 +236,8 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
metis-edf | 0 | {engineering-dev} |
ompl | 0 | {robotics} |
openturns | 0 | {engineering-dev,meteorology-dev,mathematics-dev} |
- openturns | 0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
+ openturns | 0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
psurface | 0 | {numericalcomputation} |
python-escript | 0 | {simulations,engineering,numericalcomputation} |
qrupdate | 0 | {mathematics-dev} |
@@ -254,5 +255,5 @@ Last-Update: Sat, 14 May 2022 01:42:04 +0000
triangle | 0 | {physics-dev} |
trilinos | 0 | {physics-dev,mathematics-dev,engineering-dev} |
visp-images | 0 | {robotics-dev} |
-(286 rows)
+(287 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1e1125cfb7a9ae0f04da5b23e3821724989eaee4
--
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