[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Wed May 18 14:42:39 BST 2022



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
5b7023ee by Andreas Tille at 2022-05-18T13:42:31+00:00
automatic update

- - - - -


3 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,21 +1,22 @@
-Last-Update: Wed, 18 May 2022 01:42:04 +0000
+Last-Update: Wed, 18 May 2022 13:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    164 | {imaging,covid-19}                                  | 
- orthanc                       |     93 | {imaging,covid-19,practice}                         | 
+ dcmtk                         |    165 | {imaging,covid-19}                                  | 
+ orthanc                       |     92 | {imaging,covid-19,practice}                         | 
  orthanc-wsi                   |     45 | {laboratory,practice,imaging,covid-19,oncology,his} | 
- amide                         |     26 | {imaging}                                           | 
- dicomscope                    |     24 | {imaging}                                           | 
- nipype                        |     19 | {imaging,imaging-dev}                               | 
- dcm2niix                      |     18 | {imaging}                                           | 
+ node-shiny-server             |     34 | {epi,covid-19}                                      | 
+ amide                         |     25 | {imaging}                                           | 
+ dicomscope                    |     25 | {imaging}                                           | 
+ nipype                        |     20 | {imaging,imaging-dev}                               | 
+ dcm2niix                      |     19 | {imaging}                                           | 
  dicom3tools                   |     18 | {imaging}                                           | 
- openslide                     |     14 | {imaging-dev}                                       | 
+ openslide                     |     15 | {imaging-dev}                                       | 
  gdcm                          |     13 | {imaging-dev}                                       | 
  orthanc-webviewer             |     13 | {imaging}                                           | 
  gnumed-server                 |     11 | {practice,covid-19}                                 | 
- minc-tools                    |     11 | {imaging}                                           | 
  invesalius                    |     10 | {imaging}                                           | 
+ minc-tools                    |     10 | {imaging}                                           | 
  openslide                     |     10 | {imaging}                                           | 
  mrtrix3                       |      9 | {imaging}                                           | 
  gdcm                          |      8 | {imaging,covid-19}                                  | 
@@ -30,8 +31,8 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  plastimatch                   |      7 | {imaging}                                           | 
  jebl2                         |      6 | {bio-dev}                                           | 
  libminc                       |      6 | {imaging-dev}                                       | 
- nifticlib                     |      6 | {imaging}                                           | 
  nifticlib                     |      6 | {imaging-dev}                                       | 
+ nifticlib                     |      6 | {imaging}                                           | 
  treeview                      |      6 | {bio,bio-phylogeny}                                 | 
  getdata                       |      5 | {bio}                                               | 
  libncl                        |      5 | {bio}                                               | 
@@ -39,13 +40,13 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  obitools                      |      5 | {bio}                                               | 
  orthanc-mysql                 |      5 | {imaging}                                           | 
  salmon                        |      5 | {bio,covid-19}                                      | 
- stacks                        |      5 | {bio}                                               | 
  canu                          |      4 | {bio}                                               | 
  mia                           |      4 | {imaging}                                           | 
  nifti2dicom                   |      4 | {imaging}                                           | 
  orthanc-postgresql            |      4 | {imaging}                                           | 
  phyutility                    |      4 | {cloud,bio}                                         | 
  sibsim4                       |      4 | {cloud,bio}                                         | 
+ stacks                        |      4 | {bio}                                               | 
  staden                        |      4 | {bio}                                               | 
  bio-tradis                    |      3 | {bio-dev,bio}                                       | 
  blimps                        |      3 | {bio}                                               | 
@@ -125,6 +126,7 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  microbegps                    |      1 | {bio}                                               | 
  mssstest                      |      1 | {tools}                                             | 
  orthanc-python                |      1 | {covid-19}                                          | 
+ papyrus                       |      1 | {imaging-dev}                                       | 
  pigx-rnaseq                   |      1 | {covid-19,bio}                                      | 
  pique                         |      1 | {bio}                                               | 
  pplacer                       |      1 | {covid-19,bio-phylogeny,bio}                        | 
@@ -177,12 +179,11 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  nifticlib                     |      0 | {imaging-dev}                                       | 
  opensurgsim                   |      0 | {imaging-dev}                                       | 
  orthanc-imagej                |      0 | {imaging}                                           | 
- papyrus                       |      0 | {imaging-dev}                                       | 
  pbcopper                      |      0 | {bio-dev}                                           | 
  pbseqlib                      |      0 | {bio-dev}                                           | 
  plasmidid                     |      0 | {covid-19,bio}                                      | 
- python-seqcluster             |      0 | {covid-19,bio-dev}                                  | 
  python-seqcluster             |      0 | {bio}                                               | 
+ python-seqcluster             |      0 | {covid-19,bio-dev}                                  | 
  resfinder-db                  |      0 | {bio}                                               | 
  sbmltoolbox                   |      0 | {bio-dev}                                           | 
  simpleitk                     |      0 | {imaging-dev}                                       | 
@@ -197,5 +198,5 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  megan-ce                      |     -1 | {bio}                                               | 
  rockhopper                    |     -1 | {bio}                                               | 
  sight                         |     -1 | {imaging-dev}                                       | 
-(225 rows)
+(226 rows)
 


=====================================
debian-science-tests.txt
=====================================
@@ -1,58 +1,58 @@
-Last-Update: Wed, 18 May 2022 01:42:04 +0000
+Last-Update: Wed, 18 May 2022 13:42:05 +0000
 
       Source                             | Vote   |                    Tasks                                                         |                                Tags                                
 -----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts                                     |   2927 | {viewing}                                                                        | 
- sympy                                   |   1703 | {physics,nanoscale-physics}                                                      | 
- suitesparse                             |    263 | {mathematics-dev,numericalcomputation}                                           | 
- armadillo                               |    209 | {mathematics-dev}                                                                | 
- python-pyqtgraph                        |    117 | {viewing}                                                                        | 
- atlas                                   |     86 | {mathematics-dev}                                                                | 
+ gts                                     |   2933 | {viewing}                                                                        | 
+ sympy                                   |   1674 | {physics,nanoscale-physics}                                                      | 
+ suitesparse                             |    250 | {mathematics-dev,numericalcomputation}                                           | 
+ armadillo                               |    203 | {mathematics-dev}                                                                | 
+ python-pyqtgraph                        |    119 | {viewing}                                                                        | 
+ atlas                                   |     87 | {mathematics-dev}                                                                | 
  nltk                                    |     85 | {linguistics}                                                                    | 
  arpack                                  |     75 | {mathematics-dev}                                                                | 
- cypari2                                 |     48 | {mathematics-dev}                                                                | 
+ cypari2                                 |     51 | {mathematics-dev}                                                                | 
  arduino-mk                              |     46 | {robotics}                                                                       | 
- imview                                  |     45 | {viewing}                                                                        | 
+ imview                                  |     46 | {viewing}                                                                        | 
+ pyzo                                    |     40 | {numericalcomputation}                                                           | 
  scalapack                               |     39 | {nanoscale-physics-dev}                                                          | 
- pyzo                                    |     38 | {numericalcomputation}                                                           | 
- rubiks                                  |     33 | {geometry,mathematics}                                                           | 
- fftw                                    |     32 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
+ fftw                                    |     34 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
+ rubiks                                  |     34 | {geometry,mathematics}                                                           | 
  eclib                                   |     29 | {mathematics}                                                                    | 
  flintqs                                 |     29 | {mathematics}                                                                    | 
  sketch                                  |     24 | {typesetting}                                                                    | 
  bossa                                   |     23 | {devices}                                                                        | 
+ libmatio                                |     22 | {mathematics-dev}                                                                | 
  feedgnuplot                             |     21 | {viewing}                                                                        | 
- libmatio                                |     21 | {mathematics-dev}                                                                | 
  cernlib                                 |     20 | {highenergy-physics}                                                             | 
+ gts                                     |     19 | {viewing-dev}                                                                    | 
  geg                                     |     18 | {viewing}                                                                        | 
- guidata                                 |     18 | {dataacquisition-dev}                                                            | 
- guiqwt                                  |     18 | {numericalcomputation,viewing}                                                   | 
- gts                                     |     17 | {viewing-dev}                                                                    | 
+ flann                                   |     17 | {mathematics-dev,engineering-dev}                                                | 
+ guidata                                 |     17 | {dataacquisition-dev}                                                            | 
+ guiqwt                                  |     17 | {numericalcomputation,viewing}                                                   | 
  coinor-symphony                         |     16 | {mathematics,logic,numericalcomputation}                                         | 
- flann                                   |     16 | {mathematics-dev,engineering-dev}                                                | 
+ fftw                                    |     16 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
  gfsview                                 |     16 | {viewing}                                                                        | 
  neuron                                  |     16 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
  ros-ros-environment                     |     16 | {robotics-dev}                                                                   | 
- cernlib                                 |     15 | {highenergy-physics-dev}                                                         | 
  ntl                                     |     15 | {mathematics-dev}                                                                | 
  auto-07p                                |     14 | {mathematics}                                                                    | 
- fftw                                    |     14 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
+ cernlib                                 |     14 | {highenergy-physics-dev}                                                         | 
  python-escript                          |     14 | {numericalcomputation,engineering,simulations}                                   | 
  vitables                                |     14 | {numericalcomputation}                                                           | 
  mathgl                                  |     13 | {viewing}                                                                        | 
  matlab-support                          |     13 | {mathematics,numericalcomputation}                                               | 
  form                                    |     12 | {mathematics}                                                                    | 
  opencascade                             |     12 | {simulations}                                                                    | 
+ opticalraytracer                        |     12 | {physics}                                                                        | 
  picosat                                 |     12 | {logic}                                                                          | 
  toulbar2                                |     12 | {mathematics,numericalcomputation,logic,physics}                                 | 
  apophenia                               |     11 | {statistics}                                                                     | 
  debian-science                          |     11 | {nanoscale-physics,mathematics,physics,economics,machine-learning}               | 
  libm4ri                                 |     11 | {mathematics-dev}                                                                | 
  neuron                                  |     11 | {highenergy-physics-dev}                                                         | 
- opticalraytracer                        |     11 | {physics}                                                                        | 
+ pcl                                     |     11 | {robotics-dev}                                                                   | 
  ppl                                     |     11 | {numericalcomputation}                                                           | 
  getdp                                   |     10 | {engineering,simulations,mathematics}                                            | 
- pcl                                     |     10 | {robotics-dev}                                                                   | 
  polylib                                 |     10 | {mathematics}                                                                    | 
  rheolef                                 |     10 | {mathematics}                                                                    | 
  debian-science                          |      9 | {nanoscale-physics,economics,physics,machine-learning}                           | 
@@ -62,6 +62,7 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  tango                                   |      9 | {dataacquisition}                                                                | 
  ucto                                    |      9 | {linguistics}                                                                    | 
  uctodata                                |      9 | {linguistics}                                                                    | 
+ muparser                                |      8 | {mathematics-dev}                                                                | 
  psurface                                |      8 | {numericalcomputation}                                                           | 
  ros-rosconsole                          |      8 | {robotics-dev}                                                                   | 
  tango                                   |      8 | {dataacquisition}                                                                | 
@@ -69,7 +70,6 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  cliquer                                 |      7 | {mathematics}                                                                    | 
  eclib                                   |      7 | {mathematics-dev}                                                                | 
  jeuclid                                 |      7 | {viewing,typesetting}                                                            | 
- muparser                                |      7 | {mathematics-dev}                                                                | 
  syrthes                                 |      7 | {engineering}                                                                    | 
  urdfdom-headers                         |      7 | {robotics-dev}                                                                   | 
  code-saturne                            |      6 | {mathematics-dev,engineering-dev}                                                | 
@@ -82,7 +82,9 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  libvigraimpex                           |      6 | {imageanalysis-dev,machine-learning}                                             | 
  lrcalc                                  |      6 | {mathematics-dev}                                                                | 
  morse-simulator                         |      6 | {robotics}                                                                       | 
+ opencascade                             |      6 | {simulations}                                                                    | 
  teem                                    |      6 | {imageanalysis}                                                                  | 
+ cernlib                                 |      5 | {highenergy-physics}                                                             | 
  cimg                                    |      5 | {imageanalysis-dev}                                                              | {x11::library}
  coinmp                                  |      5 | {numericalcomputation,logic,mathematics-dev}                                     | 
  debian-science                          |      5 | {electrophysiology}                                                              | 
@@ -94,15 +96,14 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  libm4rie                                |      5 | {mathematics-dev}                                                                | 
  libzn-poly                              |      5 | {mathematics-dev}                                                                | 
  neuron                                  |      5 | {highenergy-physics-dev}                                                         | 
- opencascade                             |      5 | {simulations}                                                                    | 
  scram                                   |      5 | {engineering}                                                                    | 
  simbody                                 |      5 | {robotics-dev}                                                                   | 
  alberta                                 |      4 | {engineering-dev}                                                                | 
  cbflib                                  |      4 | {nanoscale-physics}                                                              | 
- cernlib                                 |      4 | {highenergy-physics}                                                             | 
  cliquer                                 |      4 | {mathematics-dev}                                                                | 
  debian-science                          |      4 | {tools}                                                                          | 
  dimbl                                   |      4 | {linguistics}                                                                    | 
+ dxflib                                  |      4 | {engineering-dev}                                                                | 
  gf2x                                    |      4 | {mathematics-dev}                                                                | 
  iml                                     |      4 | {mathematics-dev}                                                                | 
  irstlm                                  |      4 | {linguistics}                                                                    | 
@@ -110,6 +111,7 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  libmatheval                             |      4 | {mathematics-dev}                                                                | 
  mbt                                     |      4 | {linguistics}                                                                    | 
  openmx                                  |      4 | {physics,nanoscale-physics}                                                      | 
+ qd                                      |      4 | {mathematics-dev}                                                                | 
  qwtplot3d                               |      4 | {viewing-dev}                                                                    | 
  ratpoints                               |      4 | {mathematics-dev}                                                                | 
  taurus                                  |      4 | {dataacquisition}                                                                | 
@@ -122,7 +124,6 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  debian-science                          |      3 | {nanoscale-physics-dev}                                                          | 
  debian-science                          |      3 | {psychophysics}                                                                  | 
  dune-localfunctions                     |      3 | {mathematics-dev}                                                                | 
- dxflib                                  |      3 | {engineering-dev}                                                                | 
  hpcc                                    |      3 | {numericalcomputation,distributedcomputing}                                      | 
  ipe-tools                               |      3 | {typesetting}                                                                    | 
  libgetdata                              |      3 | {dataacquisition-dev}                                                            | 
@@ -131,7 +132,6 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  mbtserver                               |      3 | {linguistics}                                                                    | 
  newmat                                  |      3 | {mathematics-dev}                                                                | 
  openstereogram                          |      3 | {tools}                                                                          | 
- qd                                      |      3 | {mathematics-dev}                                                                | 
  sac2mseed                               |      3 | {geography}                                                                      | 
  sardana                                 |      3 | {dataacquisition}                                                                | 
  timblserver                             |      3 | {linguistics}                                                                    | 
@@ -140,9 +140,9 @@ Last-Update: Wed, 18 May 2022 01:42:04 +0000
  clhep                                   |      2 | {highenergy-physics-dev}                                                         | 
  clipper                                 |      2 | {nanoscale-physics-dev}                                                          | 
  collada-dom                             |      2 | {viewing-dev}                                                                    | 
- debian-science                          |      2 | {economics}                                                                      | 
- debian-science                          |      2 | {electrophysiology}                                                              | 
  debian-science                          |      2 | {physics}                                                                        | 
+ debian-science                          |      2 | {electrophysiology}                                                              | 
+ debian-science                          |      2 | {economics}                                                                      | 
  harp                                    |      2 | {meteorology}                                                                    | 
  libccp4                                 |      2 | {nanoscale-physics-dev}                                                          | 
  libcgns                                 |      2 | {engineering-dev}                                                                | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5b7023eef3e60bca7fed4fbd428eda6186204b47

-- 
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