Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
d6291d37 by Andreas Tille at 2022-05-19T13:42:22+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,56 +1,55 @@
-Last-Update: Thu, 19 May 2022 01:42:04 +0000
+Last-Update: Thu, 19 May 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 165 | {imaging,covid-19} |
- orthanc | 92 | {imaging,covid-19,practice} |
- orthanc-wsi | 45 | {laboratory,practice,imaging,covid-19,oncology,his} |
+ dcmtk | 168 | {imaging,covid-19} |
+ orthanc | 94 | {imaging,covid-19,practice} |
+ orthanc-wsi | 46 | {laboratory,practice,imaging,covid-19,oncology,his} |
node-shiny-server | 34 | {epi,covid-19} |
- amide | 25 | {imaging} |
+ amide | 26 | {imaging} |
dicomscope | 25 | {imaging} |
- nipype | 20 | {imaging,imaging-dev} |
+ nipype | 24 | {imaging,imaging-dev} |
dcm2niix | 19 | {imaging} |
- dicom3tools | 18 | {imaging} |
- openslide | 15 | {imaging-dev} |
+ dicom3tools | 19 | {imaging} |
+ openslide | 14 | {imaging-dev} |
+ orthanc-webviewer | 14 | {imaging} |
gdcm | 13 | {imaging-dev} |
- orthanc-webviewer | 13 | {imaging} |
gnumed-server | 11 | {practice,covid-19} |
invesalius | 10 | {imaging} |
minc-tools | 10 | {imaging} |
+ mrtrix3 | 10 | {imaging} |
openslide | 10 | {imaging} |
- mrtrix3 | 9 | {imaging} |
+ orthanc-dicomweb | 9 | {covid-19,imaging} |
+ adun.app | 8 | {bio} |
gdcm | 8 | {imaging,covid-19} |
oscar | 8 | {data,practice,tools} |
- adun.app | 7 | {bio} |
biojava-live | 7 | {bio-dev} |
dicomnifti | 7 | {imaging} |
dicompyler | 7 | {oncology} |
+ jebl2 | 7 | {bio-dev} |
librg-utils-perl | 7 | {bio} |
- orthanc-dicomweb | 7 | {covid-19,imaging} |
pixelmed | 7 | {imaging} |
plastimatch | 7 | {imaging} |
- jebl2 | 6 | {bio-dev} |
libminc | 6 | {imaging-dev} |
- nifticlib | 6 | {imaging-dev} |
nifticlib | 6 | {imaging} |
+ nifticlib | 6 | {imaging-dev} |
treeview | 6 | {bio,bio-phylogeny} |
getdata | 5 | {bio} |
libncl | 5 | {bio} |
nifti2dicom | 5 | {imaging} |
obitools | 5 | {bio} |
orthanc-mysql | 5 | {imaging} |
+ orthanc-postgresql | 5 | {imaging} |
salmon | 5 | {bio,covid-19} |
canu | 4 | {bio} |
+ cmtk | 4 | {imaging} |
mia | 4 | {imaging} |
- nifti2dicom | 4 | {imaging} |
- orthanc-postgresql | 4 | {imaging} |
phyutility | 4 | {cloud,bio} |
sibsim4 | 4 | {cloud,bio} |
stacks | 4 | {bio} |
staden | 4 | {bio} |
bio-tradis | 3 | {bio-dev,bio} |
blimps | 3 | {bio} |
- cmtk | 3 | {imaging} |
fastml | 3 | {bio} |
ghmm | 3 | {bio} |
lamarc | 3 | {bio} |
@@ -90,6 +89,7 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
librdp-taxonomy-tree-java | 2 | {bio-dev} |
metaphlan2 | 2 | {bio} |
opencfu | 2 | {laboratory} |
+ orthanc-python | 2 | {covid-19} |
placnet | 2 | {bio} |
plasmidseeker | 2 | {bio} |
pscan-chip | 2 | {bio} |
@@ -123,9 +123,9 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
kmerresistance | 1 | {bio} |
libchado-perl | 1 | {bio-dev} |
libgenome | 1 | {bio-dev} |
+ libxdf | 1 | {imaging-dev} |
microbegps | 1 | {bio} |
mssstest | 1 | {tools} |
- orthanc-python | 1 | {covid-19} |
papyrus | 1 | {imaging-dev} |
pigx-rnaseq | 1 | {covid-19,bio} |
pique | 1 | {bio} |
@@ -169,7 +169,6 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
libseqlib | 0 | {bio-dev} |
libstatgen | 0 | {bio-dev} |
libvistaio | 0 | {imaging-dev} |
- libxdf | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
mia | 0 | {imaging-dev} |
@@ -186,6 +185,7 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
python-seqcluster | 0 | {covid-19,bio-dev} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
+ sight | 0 | {imaging-dev} |
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {covid-19,bio} |
tipp | 0 | {covid-19,bio} |
@@ -197,6 +197,5 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
malt | -1 | {bio} |
megan-ce | -1 | {bio} |
rockhopper | -1 | {bio} |
- sight | -1 | {imaging-dev} |
-(226 rows)
+(225 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,88 +1,88 @@
-Last-Update: Thu, 19 May 2022 01:42:04 +0000
+Last-Update: Thu, 19 May 2022 13:42:05 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 2933 | {viewing} |
- sympy | 1674 | {physics,nanoscale-physics} |
- suitesparse | 250 | {mathematics-dev,numericalcomputation} |
- armadillo | 203 | {mathematics-dev} |
- python-pyqtgraph | 119 | {viewing} |
- atlas | 87 | {mathematics-dev} |
+ gts | 2934 | {viewing} |
+ sympy | 1623 | {physics,nanoscale-physics} |
+ suitesparse | 242 | {mathematics-dev,numericalcomputation} |
+ armadillo | 201 | {mathematics-dev} |
+ python-pyqtgraph | 120 | {viewing} |
+ atlas | 86 | {mathematics-dev} |
nltk | 85 | {linguistics} |
- arpack | 75 | {mathematics-dev} |
- cypari2 | 51 | {mathematics-dev} |
- arduino-mk | 46 | {robotics} |
- imview | 46 | {viewing} |
- pyzo | 40 | {numericalcomputation} |
+ arpack | 76 | {mathematics-dev} |
+ cypari2 | 52 | {mathematics-dev} |
+ arduino-mk | 45 | {robotics} |
+ pyzo | 44 | {numericalcomputation} |
+ imview | 43 | {viewing} |
scalapack | 39 | {nanoscale-physics-dev} |
+ rubiks | 37 | {geometry,mathematics} |
fftw | 34 | {mathematics-dev,meteorology-dev,physics-dev} |
- rubiks | 34 | {geometry,mathematics} |
- eclib | 29 | {mathematics} |
- flintqs | 29 | {mathematics} |
- sketch | 24 | {typesetting} |
- bossa | 23 | {devices} |
- libmatio | 22 | {mathematics-dev} |
+ eclib | 32 | {mathematics} |
+ flintqs | 31 | {mathematics} |
+ sketch | 25 | {typesetting} |
+ bossa | 21 | {devices} |
feedgnuplot | 21 | {viewing} |
+ libmatio | 21 | {mathematics-dev} |
cernlib | 20 | {highenergy-physics} |
- gts | 19 | {viewing-dev} |
+ flann | 18 | {mathematics-dev,engineering-dev} |
geg | 18 | {viewing} |
- flann | 17 | {mathematics-dev,engineering-dev} |
- guidata | 17 | {dataacquisition-dev} |
- guiqwt | 17 | {numericalcomputation,viewing} |
- coinor-symphony | 16 | {mathematics,logic,numericalcomputation} |
+ gts | 18 | {viewing-dev} |
+ ros-ros-environment | 17 | {robotics-dev} |
fftw | 16 | {mathematics-dev,meteorology-dev,physics-dev} |
- gfsview | 16 | {viewing} |
+ guidata | 16 | {dataacquisition-dev} |
+ guiqwt | 16 | {numericalcomputation,viewing} |
neuron | 16 | {neuroscience-modeling,highenergy-physics,simulations} |
- ros-ros-environment | 16 | {robotics-dev} |
- ntl | 15 | {mathematics-dev} |
- auto-07p | 14 | {mathematics} |
- cernlib | 14 | {highenergy-physics-dev} |
- python-escript | 14 | {numericalcomputation,engineering,simulations} |
- vitables | 14 | {numericalcomputation} |
- mathgl | 13 | {viewing} |
- matlab-support | 13 | {mathematics,numericalcomputation} |
+ ntl | 16 | {mathematics-dev} |
+ auto-07p | 15 | {mathematics} |
+ cernlib | 15 | {highenergy-physics-dev} |
+ coinor-symphony | 15 | {mathematics,logic,numericalcomputation} |
+ gfsview | 15 | {viewing} |
+ vitables | 15 | {numericalcomputation} |
+ matlab-support | 14 | {mathematics,numericalcomputation} |
+ ppl | 13 | {numericalcomputation} |
+ python-escript | 13 | {numericalcomputation,engineering,simulations} |
form | 12 | {mathematics} |
+ mathgl | 12 | {viewing} |
opencascade | 12 | {simulations} |
- opticalraytracer | 12 | {physics} |
picosat | 12 | {logic} |
- toulbar2 | 12 | {mathematics,numericalcomputation,logic,physics} |
apophenia | 11 | {statistics} |
debian-science | 11 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
+ getdp | 11 | {engineering,simulations,mathematics} |
libm4ri | 11 | {mathematics-dev} |
neuron | 11 | {highenergy-physics-dev} |
+ opticalraytracer | 11 | {physics} |
pcl | 11 | {robotics-dev} |
- ppl | 11 | {numericalcomputation} |
- getdp | 10 | {engineering,simulations,mathematics} |
- polylib | 10 | {mathematics} |
- rheolef | 10 | {mathematics} |
- debian-science | 9 | {nanoscale-physics,economics,physics,machine-learning} |
+ polylib | 11 | {mathematics} |
+ rheolef | 11 | {mathematics} |
+ toulbar2 | 11 | {mathematics,numericalcomputation,logic,physics} |
+ lxi-tools | 10 | {engineering,dataacquisition} |
+ ucto | 10 | {linguistics} |
+ uctodata | 10 | {linguistics} |
debian-science | 9 | {physics,nanoscale-physics,economics,statistics} |
lrcalc | 9 | {mathematics} |
- lxi-tools | 9 | {engineering,dataacquisition} |
+ ros-rosconsole | 9 | {robotics-dev} |
tango | 9 | {dataacquisition} |
- ucto | 9 | {linguistics} |
- uctodata | 9 | {linguistics} |
+ cliquer | 8 | {mathematics} |
+ debian-science | 8 | {nanoscale-physics,economics,physics,machine-learning} |
+ ipe-tools | 8 | {typesetting} |
+ jeuclid | 8 | {viewing,typesetting} |
muparser | 8 | {mathematics-dev} |
- psurface | 8 | {numericalcomputation} |
- ros-rosconsole | 8 | {robotics-dev} |
tango | 8 | {dataacquisition} |
astk | 7 | {engineering} |
- cliquer | 7 | {mathematics} |
+ debian-science | 7 | {machine-learning,neuroscience-cognitive} |
eclib | 7 | {mathematics-dev} |
- jeuclid | 7 | {viewing,typesetting} |
+ psurface | 7 | {numericalcomputation} |
syrthes | 7 | {engineering} |
urdfdom-headers | 7 | {robotics-dev} |
code-saturne | 6 | {mathematics-dev,engineering-dev} |
- debian-science | 6 | {machine-learning,neuroscience-cognitive} |
dxsamples | 6 | {nanoscale-physics} |
etsf-io | 6 | {nanoscale-physics,physics} |
- ipe-tools | 6 | {typesetting} |
libcgns | 6 | {engineering} |
libmatheval | 6 | {mathematics} |
libvigraimpex | 6 | {imageanalysis-dev,machine-learning} |
lrcalc | 6 | {mathematics-dev} |
- morse-simulator | 6 | {robotics} |
opencascade | 6 | {simulations} |
+ scram | 6 | {engineering} |
teem | 6 | {imageanalysis} |
cernlib | 5 | {highenergy-physics} |
cimg | 5 | {imageanalysis-dev} | {x11::library}
@@ -90,30 +90,30 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
debian-science | 5 | {electrophysiology} |
dune-istl | 5 | {mathematics-dev} |
dune-uggrid | 5 | {mathematics-dev} |
+ dxflib | 5 | {engineering-dev} |
frog | 5 | {linguistics} |
libgetdata | 5 | {dataacquisition} |
libitpp | 5 | {mathematics-dev,engineering-dev} |
libm4rie | 5 | {mathematics-dev} |
libzn-poly | 5 | {mathematics-dev} |
+ morse-simulator | 5 | {robotics} |
neuron | 5 | {highenergy-physics-dev} |
- scram | 5 | {engineering} |
simbody | 5 | {robotics-dev} |
alberta | 4 | {engineering-dev} |
cbflib | 4 | {nanoscale-physics} |
cliquer | 4 | {mathematics-dev} |
debian-science | 4 | {tools} |
dimbl | 4 | {linguistics} |
- dxflib | 4 | {engineering-dev} |
gf2x | 4 | {mathematics-dev} |
iml | 4 | {mathematics-dev} |
irstlm | 4 | {linguistics} |
libgtkdatabox | 4 | {engineering-dev,viewing-dev} |
libmatheval | 4 | {mathematics-dev} |
mbt | 4 | {linguistics} |
- openmx | 4 | {physics,nanoscale-physics} |
qd | 4 | {mathematics-dev} |
qwtplot3d | 4 | {viewing-dev} |
ratpoints | 4 | {mathematics-dev} |
+ sac2mseed | 4 | {geography} |
taurus | 4 | {dataacquisition} |
timbl | 4 | {linguistics} |
x13as | 4 | {economics} |
@@ -131,8 +131,8 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
looptools | 3 | {highenergy-physics} |
mbtserver | 3 | {linguistics} |
newmat | 3 | {mathematics-dev} |
+ openmx | 3 | {physics,nanoscale-physics} |
openstereogram | 3 | {tools} |
- sac2mseed | 3 | {geography} |
sardana | 3 | {dataacquisition} |
timblserver | 3 | {linguistics} |
apophenia | 2 | {statistics} |
@@ -140,16 +140,17 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
clhep | 2 | {highenergy-physics-dev} |
clipper | 2 | {nanoscale-physics-dev} |
collada-dom | 2 | {viewing-dev} |
- debian-science | 2 | {physics} |
- debian-science | 2 | {electrophysiology} |
debian-science | 2 | {economics} |
+ debian-science | 2 | {electrophysiology} |
+ debian-science | 2 | {physics} |
+ fastjet | 2 | {highenergy-physics-dev} |
harp | 2 | {meteorology} |
libccp4 | 2 | {nanoscale-physics-dev} |
libcgns | 2 | {engineering-dev} |
libgetdata | 2 | {dataacquisition-dev} |
liblbfgs | 2 | {mathematics-dev} |
+ looptools | 2 | {highenergy-physics-dev} |
metis-edf | 2 | {numericalcomputation,engineering} |
- mrmpi | 2 | {tools} |
pycollada | 2 | {engineering-dev} |
sparskit | 2 | {mathematics-dev} |
ssm | 2 | {nanoscale-physics} |
@@ -163,13 +164,12 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
debian-science | 1 | {neuroscience-cognitive} |
dune-functions | 1 | {mathematics-dev} |
dune-typetree | 1 | {mathematics-dev} |
- fastjet | 1 | {highenergy-physics-dev} |
gemmlowp | 1 | {mathematics-dev} |
itsol | 1 | {mathematics-dev} |
liblxi | 1 | {dataacquisition-dev,engineering-dev} |
liborigin2 | 1 | {viewing-dev} |
libxsmm | 1 | {mathematics-dev} |
- looptools | 1 | {highenergy-physics-dev} |
+ mrmpi | 1 | {tools} |
neartree | 1 | {numericalcomputation,mathematics-dev} |
ompl | 1 | {robotics-dev} |
openctm | 1 | {physics-dev} |
@@ -208,9 +208,9 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
apriltag | 0 | {robotics-dev} |
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
+ cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics-dev} |
cernlib | 0 | {highenergy-physics,physics} |
- cernlib | 0 | {highenergy-physics} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -221,8 +221,8 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
fastjet | 0 | {highenergy-physics-dev} |
frogdata | 0 | {linguistics} |
glpk-java | 0 | {mathematics-dev} |
- jhdf | 0 | {engineering-dev} |
jhdf | 0 | {engineering} |
+ jhdf | 0 | {engineering-dev} |
libdogleg | 0 | {mathematics-dev} |
libfolia | 0 | {linguistics} |
libgetdata | 0 | {dataacquisition-dev} |
@@ -235,14 +235,14 @@ Last-Update: Thu, 19 May 2022 01:42:04 +0000
metis-edf | 0 | {engineering-dev} |
ompl | 0 | {robotics} |
openturns | 0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
- openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
openturns | 0 | {engineering-dev,meteorology-dev,mathematics-dev} |
+ openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
psurface | 0 | {numericalcomputation} |
python-escript | 0 | {simulations,engineering,numericalcomputation} |
qrupdate | 0 | {mathematics-dev} |
robot-testing-framework | 0 | {robotics-dev} |
- ros-metapackages | 0 | {robotics} |
ros-metapackages | 0 | {robotics-dev} |
+ ros-metapackages | 0 | {robotics} |
sagemath-database-combinatorial-designs | 0 | {mathematics} |
sagemath-database-conway-polynomials | 0 | {mathematics} |
sagemath-database-elliptic-curves | 0 | {mathematics} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d6291d37d683b4ad7fcf55e8b357b5bb3886823a
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