[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Sat May 21 14:42:28 BST 2022



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
dca3c08e by Andreas Tille at 2022-05-21T13:42:23+00:00
automatic update

- - - - -


3 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,28 +1,27 @@
-Last-Update: Sat, 21 May 2022 01:42:04 +0000
+Last-Update: Sat, 21 May 2022 13:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
  dcmtk                         |    171 | {imaging,covid-19}                                  | 
  orthanc                       |     95 | {imaging,practice,covid-19}                         | 
- orthanc-wsi                   |     47 | {his,oncology,practice,laboratory,imaging,covid-19} | 
+ orthanc-wsi                   |     46 | {his,oncology,practice,laboratory,imaging,covid-19} | 
  node-shiny-server             |     34 | {epi,covid-19}                                      | 
  amide                         |     27 | {imaging}                                           | 
- nipype                        |     25 | {imaging,imaging-dev}                               | 
  dicomscope                    |     24 | {imaging}                                           | 
+ nipype                        |     24 | {imaging,imaging-dev}                               | 
+ dcm2niix                      |     19 | {imaging}                                           | 
  dicom3tools                   |     19 | {imaging}                                           | 
- dcm2niix                      |     18 | {imaging}                                           | 
- orthanc-webviewer             |     15 | {imaging}                                           | 
  openslide                     |     14 | {imaging-dev}                                       | 
+ orthanc-webviewer             |     14 | {imaging}                                           | 
  gdcm                          |     13 | {imaging-dev}                                       | 
- gnumed-server                 |     11 | {practice,covid-19}                                 | 
- invesalius                    |     10 | {imaging}                                           | 
+ gnumed-server                 |     12 | {practice,covid-19}                                 | 
+ invesalius                    |     11 | {imaging}                                           | 
  minc-tools                    |     10 | {imaging}                                           | 
  mrtrix3                       |     10 | {imaging}                                           | 
  openslide                     |     10 | {imaging}                                           | 
- orthanc-dicomweb              |      9 | {imaging,covid-19}                                  | 
+ gdcm                          |      9 | {imaging,covid-19}                                  | 
  adun.app                      |      8 | {bio}                                               | 
- gdcm                          |      8 | {imaging,covid-19}                                  | 
- oscar                         |      8 | {tools,practice,data}                               | 
+ orthanc-dicomweb              |      8 | {imaging,covid-19}                                  | 
  pixelmed                      |      8 | {imaging}                                           | 
  biojava-live                  |      7 | {bio-dev}                                           | 
  dicomnifti                    |      7 | {imaging}                                           | 
@@ -30,26 +29,28 @@ Last-Update: Sat, 21 May 2022 01:42:04 +0000
  jebl2                         |      7 | {bio-dev}                                           | 
  librg-utils-perl              |      7 | {bio}                                               | 
  nifticlib                     |      7 | {imaging}                                           | 
+ nifticlib                     |      7 | {imaging-dev}                                       | 
+ oscar                         |      7 | {tools,practice,data}                               | 
  plastimatch                   |      7 | {imaging}                                           | 
  libminc                       |      6 | {imaging-dev}                                       | 
- nifticlib                     |      6 | {imaging-dev}                                       | 
- orthanc-postgresql            |      6 | {imaging}                                           | 
  treeview                      |      6 | {bio,bio-phylogeny}                                 | 
  getdata                       |      5 | {bio}                                               | 
- libncl                        |      5 | {bio}                                               | 
  nifti2dicom                   |      5 | {imaging}                                           | 
  obitools                      |      5 | {bio}                                               | 
- orthanc-mysql                 |      5 | {imaging}                                           | 
+ orthanc-postgresql            |      5 | {imaging}                                           | 
  salmon                        |      5 | {covid-19,bio}                                      | 
  canu                          |      4 | {bio}                                               | 
  cmtk                          |      4 | {imaging}                                           | 
+ libncl                        |      4 | {bio}                                               | 
  mia                           |      4 | {imaging}                                           | 
+ orthanc-mysql                 |      4 | {imaging}                                           | 
  phyutility                    |      4 | {bio,cloud}                                         | 
  sibsim4                       |      4 | {cloud,bio}                                         | 
  stacks                        |      4 | {bio}                                               | 
  staden                        |      4 | {bio}                                               | 
  bio-tradis                    |      3 | {bio,bio-dev}                                       | 
  blimps                        |      3 | {bio}                                               | 
+ elastix                       |      3 | {imaging}                                           | 
  fastml                        |      3 | {bio}                                               | 
  ghmm                          |      3 | {bio}                                               | 
  lamarc                        |      3 | {bio}                                               | 
@@ -77,7 +78,6 @@ Last-Update: Sat, 21 May 2022 01:42:04 +0000
  clonalorigin                  |      2 | {bio}                                               | 
  cufflinks                     |      2 | {cloud,bio}                                         | 
  delly                         |      2 | {covid-19,bio}                                      | 
- elastix                       |      2 | {imaging}                                           | 
  embassy-domainatrix           |      2 | {bio,cloud}                                         | 
  gatb-core                     |      2 | {bio}                                               | 
  hinge                         |      2 | {bio}                                               | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,71 +1,70 @@
-Last-Update: Sat, 21 May 2022 01:42:04 +0000
+Last-Update: Sat, 21 May 2022 13:42:05 +0000
 
       Source                             | Vote   |                    Tasks                                                         |                                Tags                                
 -----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts                                     |   2941 | {viewing}                                                                        | 
- sympy                                   |   1613 | {physics,nanoscale-physics}                                                      | 
- suitesparse                             |    240 | {mathematics-dev,numericalcomputation}                                           | 
- armadillo                               |    205 | {mathematics-dev}                                                                | 
+ gts                                     |   2934 | {viewing}                                                                        | 
+ sympy                                   |   1605 | {physics,nanoscale-physics}                                                      | 
+ suitesparse                             |    239 | {mathematics-dev,numericalcomputation}                                           | 
+ armadillo                               |    202 | {mathematics-dev}                                                                | 
  python-pyqtgraph                        |    122 | {viewing}                                                                        | 
- atlas                                   |     86 | {mathematics-dev}                                                                | 
- nltk                                    |     83 | {linguistics}                                                                    | 
+ atlas                                   |     87 | {mathematics-dev}                                                                | 
+ nltk                                    |     84 | {linguistics}                                                                    | 
  arpack                                  |     77 | {mathematics-dev}                                                                | 
- cypari2                                 |     52 | {mathematics-dev}                                                                | 
- arduino-mk                              |     46 | {robotics}                                                                       | 
- pyzo                                    |     45 | {numericalcomputation}                                                           | 
- imview                                  |     42 | {viewing}                                                                        | 
- scalapack                               |     40 | {nanoscale-physics-dev}                                                          | 
- rubiks                                  |     39 | {geometry,mathematics}                                                           | 
- eclib                                   |     34 | {mathematics}                                                                    | 
- fftw                                    |     33 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
- flintqs                                 |     32 | {mathematics}                                                                    | 
+ cypari2                                 |     51 | {mathematics-dev}                                                                | 
+ pyzo                                    |     46 | {numericalcomputation}                                                           | 
+ arduino-mk                              |     45 | {robotics}                                                                       | 
+ imview                                  |     43 | {viewing}                                                                        | 
+ scalapack                               |     39 | {nanoscale-physics-dev}                                                          | 
+ rubiks                                  |     37 | {geometry,mathematics}                                                           | 
+ eclib                                   |     32 | {mathematics}                                                                    | 
+ fftw                                    |     32 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
+ flintqs                                 |     30 | {mathematics}                                                                    | 
  sketch                                  |     26 | {typesetting}                                                                    | 
  bossa                                   |     22 | {devices}                                                                        | 
  cernlib                                 |     22 | {highenergy-physics}                                                             | 
- feedgnuplot                             |     21 | {viewing}                                                                        | 
  libmatio                                |     21 | {mathematics-dev}                                                                | 
+ feedgnuplot                             |     20 | {viewing}                                                                        | 
  flann                                   |     20 | {mathematics-dev,engineering-dev}                                                | 
- geg                                     |     19 | {viewing}                                                                        | 
- gts                                     |     19 | {viewing-dev}                                                                    | 
+ gts                                     |     20 | {viewing-dev}                                                                    | 
+ geg                                     |     18 | {viewing}                                                                        | 
  cernlib                                 |     17 | {highenergy-physics-dev}                                                         | 
+ ntl                                     |     17 | {mathematics-dev}                                                                | 
  ros-ros-environment                     |     17 | {robotics-dev}                                                                   | 
  fftw                                    |     16 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
- guidata                                 |     16 | {dataacquisition-dev}                                                            | 
- guiqwt                                  |     16 | {numericalcomputation,viewing}                                                   | 
- neuron                                  |     16 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
- ntl                                     |     16 | {mathematics-dev}                                                                | 
- auto-07p                                |     15 | {mathematics}                                                                    | 
- coinor-symphony                         |     15 | {mathematics,logic,numericalcomputation}                                         | 
- gfsview                                 |     15 | {viewing}                                                                        | 
+ guidata                                 |     15 | {dataacquisition-dev}                                                            | 
+ guiqwt                                  |     15 | {numericalcomputation,viewing}                                                   | 
  vitables                                |     15 | {numericalcomputation}                                                           | 
- matlab-support                          |     14 | {mathematics,numericalcomputation}                                               | 
+ auto-07p                                |     14 | {mathematics}                                                                    | 
+ coinor-symphony                         |     14 | {mathematics,logic,numericalcomputation}                                         | 
+ gfsview                                 |     14 | {viewing}                                                                        | 
+ neuron                                  |     14 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
+ picosat                                 |     14 | {logic}                                                                          | 
  mathgl                                  |     13 | {viewing}                                                                        | 
- picosat                                 |     13 | {logic}                                                                          | 
- python-escript                          |     13 | {numericalcomputation,engineering,simulations}                                   | 
- form                                    |     12 | {mathematics}                                                                    | 
+ matlab-support                          |     13 | {mathematics,numericalcomputation}                                               | 
  opencascade                             |     12 | {simulations}                                                                    | 
  pcl                                     |     12 | {robotics-dev}                                                                   | 
  ppl                                     |     12 | {numericalcomputation}                                                           | 
- apophenia                               |     11 | {statistics}                                                                     | 
+ python-escript                          |     12 | {numericalcomputation,engineering,simulations}                                   | 
  debian-science                          |     11 | {nanoscale-physics,mathematics,physics,economics,machine-learning}               | 
- getdp                                   |     11 | {engineering,simulations,mathematics}                                            | 
+ form                                    |     11 | {mathematics}                                                                    | 
  libm4ri                                 |     11 | {mathematics-dev}                                                                | 
- neuron                                  |     11 | {highenergy-physics-dev}                                                         | 
- opticalraytracer                        |     11 | {physics}                                                                        | 
- polylib                                 |     11 | {mathematics}                                                                    | 
  rheolef                                 |     11 | {mathematics}                                                                    | 
- toulbar2                                |     11 | {mathematics,numericalcomputation,logic,physics}                                 | 
+ apophenia                               |     10 | {statistics}                                                                     | 
+ getdp                                   |     10 | {engineering,simulations,mathematics}                                            | 
  lxi-tools                               |     10 | {engineering,dataacquisition}                                                    | 
- ucto                                    |     10 | {linguistics}                                                                    | 
- uctodata                                |     10 | {linguistics}                                                                    | 
+ neuron                                  |     10 | {highenergy-physics-dev}                                                         | 
+ opticalraytracer                        |     10 | {physics}                                                                        | 
+ polylib                                 |     10 | {mathematics}                                                                    | 
+ toulbar2                                |     10 | {mathematics,numericalcomputation,logic,physics}                                 | 
  debian-science                          |      9 | {physics,nanoscale-physics,economics,statistics}                                 | 
- lrcalc                                  |      9 | {mathematics}                                                                    | 
  ros-rosconsole                          |      9 | {robotics-dev}                                                                   | 
  tango                                   |      9 | {dataacquisition}                                                                | 
+ ucto                                    |      9 | {linguistics}                                                                    | 
+ uctodata                                |      9 | {linguistics}                                                                    | 
  debian-science                          |      8 | {nanoscale-physics,economics,physics,machine-learning}                           | 
  ipe-tools                               |      8 | {typesetting}                                                                    | 
  jeuclid                                 |      8 | {viewing,typesetting}                                                            | 
- muparser                                |      8 | {mathematics-dev}                                                                | 
+ lrcalc                                  |      8 | {mathematics}                                                                    | 
  syrthes                                 |      8 | {engineering}                                                                    | 
  tango                                   |      8 | {dataacquisition}                                                                | 
  urdfdom-headers                         |      8 | {robotics-dev}                                                                   | 
@@ -73,11 +72,10 @@ Last-Update: Sat, 21 May 2022 01:42:04 +0000
  cliquer                                 |      7 | {mathematics}                                                                    | 
  debian-science                          |      7 | {machine-learning,neuroscience-cognitive}                                        | 
  eclib                                   |      7 | {mathematics-dev}                                                                | 
+ muparser                                |      7 | {mathematics-dev}                                                                | 
  psurface                                |      7 | {numericalcomputation}                                                           | 
- code-saturne                            |      6 | {mathematics-dev,engineering-dev}                                                | 
  dune-istl                               |      6 | {mathematics-dev}                                                                | 
  dxsamples                               |      6 | {nanoscale-physics}                                                              | 
- etsf-io                                 |      6 | {nanoscale-physics,physics}                                                      | 
  libcgns                                 |      6 | {engineering}                                                                    | 
  libmatheval                             |      6 | {mathematics}                                                                    | 
  libvigraimpex                           |      6 | {imageanalysis-dev,machine-learning}                                             | 
@@ -85,36 +83,34 @@ Last-Update: Sat, 21 May 2022 01:42:04 +0000
  opencascade                             |      6 | {simulations}                                                                    | 
  scram                                   |      6 | {engineering}                                                                    | 
  simbody                                 |      6 | {robotics-dev}                                                                   | 
- teem                                    |      6 | {imageanalysis}                                                                  | 
  cernlib                                 |      5 | {highenergy-physics}                                                             | 
- cimg                                    |      5 | {imageanalysis-dev}                                                              | {x11::library}
+ code-saturne                            |      5 | {mathematics-dev,engineering-dev}                                                | 
  coinmp                                  |      5 | {numericalcomputation,logic,mathematics-dev}                                     | 
  debian-science                          |      5 | {electrophysiology}                                                              | 
  dune-uggrid                             |      5 | {mathematics-dev}                                                                | 
  dxflib                                  |      5 | {engineering-dev}                                                                | 
- frog                                    |      5 | {linguistics}                                                                    | 
- libgetdata                              |      5 | {dataacquisition}                                                                | 
+ etsf-io                                 |      5 | {nanoscale-physics,physics}                                                      | 
  libitpp                                 |      5 | {mathematics-dev,engineering-dev}                                                | 
  libm4rie                                |      5 | {mathematics-dev}                                                                | 
  libzn-poly                              |      5 | {mathematics-dev}                                                                | 
  morse-simulator                         |      5 | {robotics}                                                                       | 
  neuron                                  |      5 | {highenergy-physics-dev}                                                         | 
+ teem                                    |      5 | {imageanalysis}                                                                  | 
  alberta                                 |      4 | {engineering-dev}                                                                | 
  cbflib                                  |      4 | {nanoscale-physics}                                                              | 
+ cimg                                    |      4 | {imageanalysis-dev}                                                              | {x11::library}
  cliquer                                 |      4 | {mathematics-dev}                                                                | 
  debian-science                          |      4 | {tools}                                                                          | 
- dimbl                                   |      4 | {linguistics}                                                                    | 
+ frog                                    |      4 | {linguistics}                                                                    | 
  gf2x                                    |      4 | {mathematics-dev}                                                                | 
  iml                                     |      4 | {mathematics-dev}                                                                | 
- irstlm                                  |      4 | {linguistics}                                                                    | 
+ libgetdata                              |      4 | {dataacquisition}                                                                | 
  libmatheval                             |      4 | {mathematics-dev}                                                                | 
- mbt                                     |      4 | {linguistics}                                                                    | 
  qd                                      |      4 | {mathematics-dev}                                                                | 
  qwtplot3d                               |      4 | {viewing-dev}                                                                    | 
  ratpoints                               |      4 | {mathematics-dev}                                                                | 
  sac2mseed                               |      4 | {geography}                                                                      | 
  taurus                                  |      4 | {dataacquisition}                                                                | 
- timbl                                   |      4 | {linguistics}                                                                    | 
  x13as                                   |      4 | {economics}                                                                      | 
  apertium-streamparser                   |      3 | {linguistics}                                                                    | 
  cernlib                                 |      3 | {highenergy-physics}                                                             | 
@@ -122,26 +118,29 @@ Last-Update: Sat, 21 May 2022 01:42:04 +0000
  coda                                    |      3 | {meteorology-dev}                                                                | 
  debian-science                          |      3 | {psychophysics}                                                                  | 
  debian-science                          |      3 | {nanoscale-physics-dev}                                                          | 
+ dimbl                                   |      3 | {linguistics}                                                                    | 
  dune-localfunctions                     |      3 | {mathematics-dev}                                                                | 
  hpcc                                    |      3 | {numericalcomputation,distributedcomputing}                                      | 
  ipe-tools                               |      3 | {typesetting}                                                                    | 
+ irstlm                                  |      3 | {linguistics}                                                                    | 
  libgetdata                              |      3 | {dataacquisition-dev}                                                            | 
  libgtkdatabox                           |      3 | {engineering-dev,viewing-dev}                                                    | 
  libhomfly                               |      3 | {mathematics-dev}                                                                | 
  looptools                               |      3 | {highenergy-physics}                                                             | 
- mbtserver                               |      3 | {linguistics}                                                                    | 
- newmat                                  |      3 | {mathematics-dev}                                                                | 
+ mbt                                     |      3 | {linguistics}                                                                    | 
  openmx                                  |      3 | {physics,nanoscale-physics}                                                      | 
  openstereogram                          |      3 | {tools}                                                                          | 
  sardana                                 |      3 | {dataacquisition}                                                                | 
+ timbl                                   |      3 | {linguistics}                                                                    | 
  timblserver                             |      3 | {linguistics}                                                                    | 
  apophenia                               |      2 | {statistics}                                                                     | 
+ cbflib                                  |      2 | {nanoscale-physics-dev}                                                          | 
  cernlib                                 |      2 | {highenergy-physics}                                                             | 
  clhep                                   |      2 | {highenergy-physics-dev}                                                         | 
  clipper                                 |      2 | {nanoscale-physics-dev}                                                          | 
  collada-dom                             |      2 | {viewing-dev}                                                                    | 
- debian-science                          |      2 | {economics}                                                                      | 
  debian-science                          |      2 | {electrophysiology}                                                              | 
+ debian-science                          |      2 | {economics}                                                                      | 
  debian-science                          |      2 | {physics}                                                                        | 
  fastjet                                 |      2 | {highenergy-physics-dev}                                                         | 
  harp                                    |      2 | {meteorology}                                                                    | 
@@ -150,13 +149,14 @@ Last-Update: Sat, 21 May 2022 01:42:04 +0000
  libgetdata                              |      2 | {dataacquisition-dev}                                                            | 
  liblbfgs                                |      2 | {mathematics-dev}                                                                | 
  looptools                               |      2 | {highenergy-physics-dev}                                                         | 
+ mbtserver                               |      2 | {linguistics}                                                                    | 
  metis-edf                               |      2 | {numericalcomputation,engineering}                                               | 
+ newmat                                  |      2 | {mathematics-dev}                                                                | 
  pycollada                               |      2 | {engineering-dev}                                                                | 
  sparskit                                |      2 | {mathematics-dev}                                                                | 
  ssm                                     |      2 | {nanoscale-physics}                                                              | 
  tango                                   |      2 | {dataacquisition-dev}                                                            | 
  asl                                     |      1 | {physics-dev}                                                                    | 
- cbflib                                  |      1 | {nanoscale-physics-dev}                                                          | 
  cld2                                    |      1 | {linguistics}                                                                    | 
  code-saturne                            |      1 | {engineering-dev,mathematics-dev}                                                | 
  cqrlib                                  |      1 | {mathematics-dev}                                                                | 
@@ -179,8 +179,8 @@ Last-Update: Sat, 21 May 2022 01:42:04 +0000
  ros-opencv-apps                         |      1 | {robotics}                                                                       | 
  ssm                                     |      1 | {nanoscale-physics-dev}                                                          | 
  tamuanova                               |      1 | {statistics}                                                                     | 
- tango                                   |      1 | {dataacquisition}                                                                | 
  tango                                   |      1 | {dataacquisition-dev}                                                            | 
+ tango                                   |      1 | {dataacquisition}                                                                | 
  vlfeat                                  |      1 | {imageanalysis-dev}                                                              | 
  apertium-afr-nld                        |      0 | {linguistics}                                                                    | 
  apertium-bel-rus                        |      0 | {linguistics}                                                                    | 
@@ -207,9 +207,9 @@ Last-Update: Sat, 21 May 2022 01:42:04 +0000
  apriltag                                |      0 | {robotics-dev}                                                                   | 
  calculix-ccx-doc                        |      0 | {simulations,numericalcomputation,engineering}                                   | 
  calculix-ccx-test                       |      0 | {simulations,engineering,numericalcomputation}                                   | 
- cernlib                                 |      0 | {highenergy-physics-dev}                                                         | 
- cernlib                                 |      0 | {highenergy-physics}                                                             | 
  cernlib                                 |      0 | {highenergy-physics,physics}                                                     | 
+ cernlib                                 |      0 | {highenergy-physics}                                                             | 
+ cernlib                                 |      0 | {highenergy-physics-dev}                                                         | 
  ckon                                    |      0 | {highenergy-physics-dev}                                                         | 
  clhep                                   |      0 | {highenergy-physics-dev}                                                         | 
  coda                                    |      0 | {meteorology-dev}                                                                | 
@@ -234,9 +234,9 @@ Last-Update: Sat, 21 May 2022 01:42:04 +0000
  metis-edf                               |      0 | {engineering-dev}                                                                | 
  ompl                                    |      0 | {robotics}                                                                       | 
  openigtlink                             |      0 | {robotics-dev}                                                                   | 
- openturns                               |      0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} | 
- openturns                               |      0 | {engineering-dev,mathematics-dev,meteorology-dev}                                | 
  openturns                               |      0 | {engineering-dev,meteorology-dev,mathematics-dev}                                | 
+ openturns                               |      0 | {engineering-dev,mathematics-dev,meteorology-dev}                                | 
+ openturns                               |      0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} | 
  psurface                                |      0 | {numericalcomputation}                                                           | 
  python-escript                          |      0 | {simulations,engineering,numericalcomputation}                                   | 
  qrupdate                                |      0 | {mathematics-dev}                                                                | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/dca3c08e77cb845ecbfb6924cedf1617aafa4957

-- 
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