[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Mon May 30 14:42:30 BST 2022



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
a1a32e34 by Andreas Tille at 2022-05-30T13:42:23+00:00
automatic update

- - - - -


3 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,27 +1,27 @@
-Last-Update: Mon, 30 May 2022 01:42:04 +0000
+Last-Update: Mon, 30 May 2022 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    166 | {imaging,covid-19}                                  | 
- orthanc                       |     90 | {covid-19,imaging,practice}                         | 
- orthanc-wsi                   |     45 | {covid-19,oncology,imaging,his,laboratory,practice} | 
+ dcmtk                         |    165 | {imaging,covid-19}                                  | 
+ orthanc                       |     91 | {covid-19,imaging,practice}                         | 
+ orthanc-wsi                   |     46 | {covid-19,oncology,imaging,his,laboratory,practice} | 
  node-shiny-server             |     39 | {covid-19,epi}                                      | 
- amide                         |     29 | {imaging}                                           | 
- dicomscope                    |     25 | {imaging}                                           | 
+ amide                         |     27 | {imaging}                                           | 
  nipype                        |     25 | {imaging-dev,imaging}                               | 
+ dicomscope                    |     24 | {imaging}                                           | 
  dicom3tools                   |     17 | {imaging}                                           | 
  orthanc-webviewer             |     17 | {imaging}                                           | 
  gnumed-server                 |     11 | {covid-19,practice}                                 | 
  orthanc-dicomweb              |     10 | {covid-19,imaging}                                  | 
+ adun.app                      |      9 | {bio}                                               | 
  biojava-live                  |      9 | {bio-dev}                                           | 
  gdcm                          |      9 | {imaging,covid-19}                                  | 
- invesalius                    |      9 | {imaging}                                           | 
  mrtrix3                       |      9 | {imaging}                                           | 
- nifticlib                     |      9 | {imaging}                                           | 
- adun.app                      |      8 | {bio}                                               | 
  dicomnifti                    |      8 | {imaging}                                           | 
+ gdcm                          |      8 | {imaging-dev}                                       | 
+ invesalius                    |      8 | {imaging}                                           | 
+ nifticlib                     |      8 | {imaging}                                           | 
  orthanc-postgresql            |      8 | {imaging}                                           | 
- gdcm                          |      7 | {imaging-dev}                                       | 
  librg-utils-perl              |      7 | {bio}                                               | 
  pixelmed                      |      7 | {imaging}                                           | 
  plastimatch                   |      7 | {imaging}                                           | 
@@ -40,7 +40,6 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  bio-tradis                    |      4 | {bio,bio-dev}                                       | 
  cmtk                          |      4 | {imaging}                                           | 
  elastix                       |      4 | {imaging}                                           | 
- libdivsufsort                 |      4 | {bio-dev}                                           | 
  libncl                        |      4 | {bio}                                               | 
  mhap                          |      4 | {bio,bio-ngs}                                       | 
  mia                           |      4 | {imaging}                                           | 
@@ -48,13 +47,13 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  phyutility                    |      4 | {bio,cloud}                                         | 
  pymia                         |      4 | {imaging-dev}                                       | 
  sibsim4                       |      4 | {bio,cloud}                                         | 
- stacks                        |      4 | {bio}                                               | 
  staden                        |      4 | {bio}                                               | 
  blimps                        |      3 | {bio}                                               | 
  fastml                        |      3 | {bio}                                               | 
  ghmm                          |      3 | {bio}                                               | 
  king                          |      3 | {typesetting,imaging}                               | 
  lamarc                        |      3 | {bio}                                               | 
+ libdivsufsort                 |      3 | {bio-dev}                                           | 
  libsbml                       |      3 | {bio-dev}                                           | 
  mauve-aligner                 |      3 | {bio}                                               | 
  melting                       |      3 | {bio,cloud}                                         | 
@@ -66,6 +65,7 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  saint                         |      3 | {bio}                                               | 
  sift                          |      3 | {bio}                                               | 
  spread-phy                    |      3 | {bio-phylogeny,bio}                                 | 
+ stacks                        |      3 | {bio}                                               | 
  anfo                          |      2 | {bio,cloud}                                         | 
  arden                         |      2 | {bio,cloud}                                         | 
  assemblytics                  |      2 | {bio}                                               | 
@@ -116,6 +116,7 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  embassy-domalign              |      1 | {cloud,bio}                                         | 
  embassy-domsearch             |      1 | {bio,cloud}                                         | 
  emmax                         |      1 | {bio}                                               | 
+ emperor                       |      1 | {bio}                                               | 
  htscodecs                     |      1 | {bio-dev,covid-19}                                  | 
  kmerresistance                |      1 | {bio}                                               | 
  libchado-perl                 |      1 | {bio-dev}                                           | 
@@ -139,7 +140,6 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  camp                          |      0 | {imaging-dev}                                       | 
  cutesv                        |      0 | {bio}                                               | 
  eegdev                        |      0 | {imaging-dev}                                       | 
- emperor                       |      0 | {bio}                                               | 
  fis-gtm                       |      0 | {his}                                               | 
  gatb-core                     |      0 | {bio-dev}                                           | 
  insighttoolkit5               |      0 | {imaging-dev}                                       | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,84 +1,84 @@
-Last-Update: Mon, 30 May 2022 01:42:04 +0000
+Last-Update: Mon, 30 May 2022 13:42:05 +0000
 
       Source                             | Vote   |                    Tasks                                                         |                                Tags                                
 -----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts                                     |   2924 | {viewing}                                                                        | 
- sympy                                   |   1725 | {physics,nanoscale-physics}                                                      | 
- suitesparse                             |    210 | {mathematics-dev,numericalcomputation}                                           | 
- armadillo                               |    194 | {mathematics-dev}                                                                | 
- python-pyqtgraph                        |    122 | {viewing}                                                                        | 
- atlas                                   |     91 | {mathematics-dev}                                                                | 
- nltk                                    |     85 | {linguistics}                                                                    | 
- arpack                                  |     72 | {mathematics-dev}                                                                | 
- cypari2                                 |     52 | {mathematics-dev}                                                                | 
- pyzo                                    |     48 | {numericalcomputation}                                                           | 
+ gts                                     |   2925 | {viewing}                                                                        | 
+ sympy                                   |   1756 | {physics,nanoscale-physics}                                                      | 
+ suitesparse                             |    201 | {mathematics-dev,numericalcomputation}                                           | 
+ armadillo                               |    196 | {mathematics-dev}                                                                | 
+ python-pyqtgraph                        |    128 | {viewing}                                                                        | 
+ atlas                                   |     88 | {mathematics-dev}                                                                | 
+ nltk                                    |     87 | {linguistics}                                                                    | 
+ arpack                                  |     70 | {mathematics-dev}                                                                | 
+ cypari2                                 |     49 | {mathematics-dev}                                                                | 
+ pyzo                                    |     49 | {numericalcomputation}                                                           | 
  arduino-mk                              |     44 | {robotics}                                                                       | 
  imview                                  |     44 | {viewing}                                                                        | 
  rubiks                                  |     39 | {geometry,mathematics}                                                           | 
  scalapack                               |     38 | {nanoscale-physics-dev}                                                          | 
  fftw                                    |     34 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
  eclib                                   |     33 | {mathematics}                                                                    | 
- flintqs                                 |     32 | {mathematics}                                                                    | 
- sketch                                  |     27 | {typesetting}                                                                    | 
- cernlib                                 |     24 | {highenergy-physics}                                                             | 
- feedgnuplot                             |     20 | {viewing}                                                                        | 
- libmatio                                |     20 | {mathematics-dev}                                                                | 
- bossa                                   |     19 | {devices}                                                                        | 
- ntl                                     |     18 | {mathematics-dev}                                                                | 
- cernlib                                 |     17 | {highenergy-physics-dev}                                                         | 
+ flintqs                                 |     33 | {mathematics}                                                                    | 
+ sketch                                  |     28 | {typesetting}                                                                    | 
+ cernlib                                 |     23 | {highenergy-physics}                                                             | 
+ feedgnuplot                             |     22 | {viewing}                                                                        | 
+ libmatio                                |     21 | {mathematics-dev}                                                                | 
+ bossa                                   |     20 | {devices}                                                                        | 
+ ntl                                     |     19 | {mathematics-dev}                                                                | 
+ gts                                     |     18 | {viewing-dev}                                                                    | 
+ flann                                   |     17 | {mathematics-dev,engineering-dev}                                                | 
  geg                                     |     17 | {viewing}                                                                        | 
- gts                                     |     17 | {viewing-dev}                                                                    | 
  auto-07p                                |     16 | {mathematics}                                                                    | 
+ cernlib                                 |     16 | {highenergy-physics-dev}                                                         | 
  fftw                                    |     16 | {mathematics-dev,meteorology-dev,physics-dev}                                    | 
- flann                                   |     16 | {mathematics-dev,engineering-dev}                                                | 
  guidata                                 |     15 | {dataacquisition-dev}                                                            | 
+ neuron                                  |     15 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
  picosat                                 |     15 | {logic}                                                                          | 
  guiqwt                                  |     14 | {numericalcomputation,viewing}                                                   | 
- neuron                                  |     14 | {neuroscience-modeling,highenergy-physics,simulations}                           | 
  ppl                                     |     14 | {numericalcomputation}                                                           | 
  coinor-symphony                         |     13 | {mathematics,logic,numericalcomputation}                                         | 
- matlab-support                          |     13 | {mathematics,numericalcomputation}                                               | 
+ gfsview                                 |     13 | {viewing}                                                                        | 
+ python-escript                          |     13 | {numericalcomputation,engineering,simulations}                                   | 
  vitables                                |     13 | {numericalcomputation}                                                           | 
- gfsview                                 |     12 | {viewing}                                                                        | 
  libm4ri                                 |     12 | {mathematics-dev}                                                                | 
  mathgl                                  |     12 | {viewing}                                                                        | 
+ matlab-support                          |     12 | {mathematics,numericalcomputation}                                               | 
  opencascade                             |     12 | {simulations}                                                                    | 
  opticalraytracer                        |     12 | {physics}                                                                        | 
  polylib                                 |     12 | {mathematics}                                                                    | 
- python-escript                          |     12 | {numericalcomputation,engineering,simulations}                                   | 
  rheolef                                 |     12 | {mathematics}                                                                    | 
- ros-ros-environment                     |     12 | {robotics-dev}                                                                   | 
  form                                    |     11 | {mathematics}                                                                    | 
+ getdp                                   |     11 | {engineering,simulations,mathematics}                                            | 
+ lxi-tools                               |     11 | {engineering,dataacquisition}                                                    | 
+ ros-ros-environment                     |     11 | {robotics-dev}                                                                   | 
  apophenia                               |     10 | {statistics}                                                                     | 
  debian-science                          |     10 | {nanoscale-physics,mathematics,physics,economics,machine-learning}               | 
- getdp                                   |     10 | {engineering,simulations,mathematics}                                            | 
- lxi-tools                               |     10 | {engineering,dataacquisition}                                                    | 
  neuron                                  |     10 | {highenergy-physics-dev}                                                         | 
  pcl                                     |     10 | {robotics-dev}                                                                   | 
  debian-science                          |      9 | {physics,nanoscale-physics,economics,statistics}                                 | 
- ros-rosconsole                          |      9 | {robotics-dev}                                                                   | 
+ ipe-tools                               |      9 | {typesetting}                                                                    | 
  syrthes                                 |      9 | {engineering}                                                                    | 
  uctodata                                |      9 | {linguistics}                                                                    | 
  cliquer                                 |      8 | {mathematics}                                                                    | 
- ipe-tools                               |      8 | {typesetting}                                                                    | 
+ libcgns                                 |      8 | {engineering}                                                                    | 
  muparser                                |      8 | {mathematics-dev}                                                                | 
+ opencascade                             |      8 | {simulations}                                                                    | 
+ ros-rosconsole                          |      8 | {robotics-dev}                                                                   | 
+ scram                                   |      8 | {engineering}                                                                    | 
  tango                                   |      8 | {dataacquisition}                                                                | 
  toulbar2                                |      8 | {mathematics,numericalcomputation,logic,physics}                                 | 
  ucto                                    |      8 | {linguistics}                                                                    | 
  astk                                    |      7 | {engineering}                                                                    | 
- cernlib                                 |      7 | {highenergy-physics}                                                             | 
- debian-science                          |      7 | {machine-learning,neuroscience-cognitive}                                        | 
  debian-science                          |      7 | {nanoscale-physics,economics,physics,machine-learning}                           | 
+ debian-science                          |      7 | {machine-learning,neuroscience-cognitive}                                        | 
  dune-istl                               |      7 | {mathematics-dev}                                                                | 
  dune-uggrid                             |      7 | {mathematics-dev}                                                                | 
  eclib                                   |      7 | {mathematics-dev}                                                                | 
  jeuclid                                 |      7 | {viewing,typesetting}                                                            | 
- libcgns                                 |      7 | {engineering}                                                                    | 
  lrcalc                                  |      7 | {mathematics}                                                                    | 
- opencascade                             |      7 | {simulations}                                                                    | 
- scram                                   |      7 | {engineering}                                                                    | 
- urdfdom-headers                         |      7 | {robotics-dev}                                                                   | 
  alberta                                 |      6 | {engineering-dev}                                                                | 
+ cernlib                                 |      6 | {highenergy-physics}                                                             | 
+ code-saturne                            |      6 | {mathematics-dev,engineering-dev}                                                | 
  dxsamples                               |      6 | {nanoscale-physics}                                                              | 
  libm4rie                                |      6 | {mathematics-dev}                                                                | 
  libmatheval                             |      6 | {mathematics}                                                                    | 
@@ -86,12 +86,13 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  libzn-poly                              |      6 | {mathematics-dev}                                                                | 
  morse-simulator                         |      6 | {robotics}                                                                       | 
  psurface                                |      6 | {numericalcomputation}                                                           | 
+ urdfdom-headers                         |      6 | {robotics-dev}                                                                   | 
  cliquer                                 |      5 | {mathematics-dev}                                                                | 
- code-saturne                            |      5 | {mathematics-dev,engineering-dev}                                                | 
  coinmp                                  |      5 | {numericalcomputation,logic,mathematics-dev}                                     | 
  etsf-io                                 |      5 | {nanoscale-physics,physics}                                                      | 
  frog                                    |      5 | {linguistics}                                                                    | 
  iml                                     |      5 | {mathematics-dev}                                                                | 
+ ipe-tools                               |      5 | {typesetting}                                                                    | 
  lrcalc                                  |      5 | {mathematics-dev}                                                                | 
  cbflib                                  |      4 | {nanoscale-physics}                                                              | 
  cimg                                    |      4 | {imageanalysis-dev}                                                              | {x11::library}
@@ -100,13 +101,13 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  dxflib                                  |      4 | {engineering-dev}                                                                | 
  gf2x                                    |      4 | {mathematics-dev}                                                                | 
  hpcc                                    |      4 | {numericalcomputation,distributedcomputing}                                      | 
- ipe-tools                               |      4 | {typesetting}                                                                    | 
  irstlm                                  |      4 | {linguistics}                                                                    | 
  libgetdata                              |      4 | {dataacquisition}                                                                | 
  libhomfly                               |      4 | {mathematics-dev}                                                                | 
  libitpp                                 |      4 | {mathematics-dev,engineering-dev}                                                | 
  libmatheval                             |      4 | {mathematics-dev}                                                                | 
  neuron                                  |      4 | {highenergy-physics-dev}                                                         | 
+ openstereogram                          |      4 | {tools}                                                                          | 
  qd                                      |      4 | {mathematics-dev}                                                                | 
  ratpoints                               |      4 | {mathematics-dev}                                                                | 
  simbody                                 |      4 | {robotics-dev}                                                                   | 
@@ -115,13 +116,14 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  teem                                    |      4 | {imageanalysis}                                                                  | 
  apertium-streamparser                   |      3 | {linguistics}                                                                    | 
  cernlib                                 |      3 | {highenergy-physics}                                                             | 
- coda                                    |      3 | {meteorology}                                                                    | 
  coda                                    |      3 | {meteorology-dev}                                                                | 
+ coda                                    |      3 | {meteorology}                                                                    | 
+ debian-science                          |      3 | {psychophysics}                                                                  | 
+ debian-science                          |      3 | {tools}                                                                          | 
  debian-science                          |      3 | {electrophysiology}                                                              | 
  debian-science                          |      3 | {nanoscale-physics-dev}                                                          | 
- debian-science                          |      3 | {tools}                                                                          | 
- debian-science                          |      3 | {psychophysics}                                                                  | 
  dimbl                                   |      3 | {linguistics}                                                                    | 
+ libcgns                                 |      3 | {engineering-dev}                                                                | 
  libgetdata                              |      3 | {dataacquisition-dev}                                                            | 
  libgtkdatabox                           |      3 | {engineering-dev,viewing-dev}                                                    | 
  looptools                               |      3 | {highenergy-physics}                                                             | 
@@ -129,11 +131,9 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  metis-edf                               |      3 | {numericalcomputation,engineering}                                               | 
  newmat                                  |      3 | {mathematics-dev}                                                                | 
  openmx                                  |      3 | {physics,nanoscale-physics}                                                      | 
- openstereogram                          |      3 | {tools}                                                                          | 
  qwtplot3d                               |      3 | {viewing-dev}                                                                    | 
  sac2mseed                               |      3 | {geography}                                                                      | 
  sardana                                 |      3 | {dataacquisition}                                                                | 
- tango                                   |      3 | {dataacquisition-dev}                                                            | 
  timbl                                   |      3 | {linguistics}                                                                    | 
  timblserver                             |      3 | {linguistics}                                                                    | 
  x13as                                   |      3 | {economics}                                                                      | 
@@ -141,11 +141,11 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  cbflib                                  |      2 | {nanoscale-physics-dev}                                                          | 
  cernlib                                 |      2 | {highenergy-physics}                                                             | 
  clhep                                   |      2 | {highenergy-physics-dev}                                                         | 
+ code-saturne                            |      2 | {engineering-dev,mathematics-dev}                                                | 
  debian-science                          |      2 | {economics}                                                                      | 
  debian-science                          |      2 | {physics}                                                                        | 
  fastjet                                 |      2 | {highenergy-physics-dev}                                                         | 
  harp                                    |      2 | {meteorology}                                                                    | 
- libcgns                                 |      2 | {engineering-dev}                                                                | 
  liblbfgs                                |      2 | {mathematics-dev}                                                                | 
  looptools                               |      2 | {highenergy-physics-dev}                                                         | 
  mbtserver                               |      2 | {linguistics}                                                                    | 
@@ -156,7 +156,6 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  asl                                     |      1 | {physics-dev}                                                                    | 
  cld2                                    |      1 | {linguistics}                                                                    | 
  clipper                                 |      1 | {nanoscale-physics-dev}                                                          | 
- code-saturne                            |      1 | {engineering-dev,mathematics-dev}                                                | 
  collada-dom                             |      1 | {viewing-dev}                                                                    | 
  cqrlib                                  |      1 | {mathematics-dev}                                                                | 
  cvector                                 |      1 | {mathematics-dev}                                                                | 
@@ -166,6 +165,8 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  frogdata                                |      1 | {linguistics}                                                                    | 
  gemmlowp                                |      1 | {mathematics-dev}                                                                | 
  itsol                                   |      1 | {mathematics-dev}                                                                | 
+ jhdf                                    |      1 | {engineering-dev}                                                                | 
+ jhdf                                    |      1 | {engineering}                                                                    | 
  libccp4                                 |      1 | {nanoscale-physics-dev}                                                          | 
  liblxi                                  |      1 | {dataacquisition-dev,engineering-dev}                                            | 
  liborigin2                              |      1 | {viewing-dev}                                                                    | 
@@ -180,6 +181,7 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  ros-opencv-apps                         |      1 | {robotics}                                                                       | 
  ssm                                     |      1 | {nanoscale-physics-dev}                                                          | 
  tamuanova                               |      1 | {statistics}                                                                     | 
+ tango                                   |      1 | {dataacquisition-dev}                                                            | 
  tango                                   |      1 | {dataacquisition}                                                                | 
  vlfeat                                  |      1 | {imageanalysis-dev}                                                              | 
  apertium-afr-nld                        |      0 | {linguistics}                                                                    | 
@@ -207,9 +209,9 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  apriltag                                |      0 | {robotics-dev}                                                                   | 
  calculix-ccx-doc                        |      0 | {simulations,numericalcomputation,engineering}                                   | 
  calculix-ccx-test                       |      0 | {simulations,engineering,numericalcomputation}                                   | 
+ cernlib                                 |      0 | {highenergy-physics,physics}                                                     | 
  cernlib                                 |      0 | {highenergy-physics}                                                             | 
  cernlib                                 |      0 | {highenergy-physics-dev}                                                         | 
- cernlib                                 |      0 | {highenergy-physics,physics}                                                     | 
  ckon                                    |      0 | {highenergy-physics-dev}                                                         | 
  clhep                                   |      0 | {highenergy-physics-dev}                                                         | 
  coda                                    |      0 | {meteorology-dev}                                                                | 
@@ -219,8 +221,6 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  etsf-io                                 |      0 | {nanoscale-physics-dev}                                                          | 
  fastjet                                 |      0 | {highenergy-physics-dev}                                                         | 
  glpk-java                               |      0 | {mathematics-dev}                                                                | 
- jhdf                                    |      0 | {engineering-dev}                                                                | 
- jhdf                                    |      0 | {engineering}                                                                    | 
  libdogleg                               |      0 | {mathematics-dev}                                                                | 
  libfolia                                |      0 | {linguistics}                                                                    | 
  libgetdata                              |      0 | {dataacquisition-dev}                                                            | 
@@ -233,9 +233,9 @@ Last-Update: Mon, 30 May 2022 01:42:04 +0000
  mrmpi                                   |      0 | {tools}                                                                          | 
  ompl                                    |      0 | {robotics}                                                                       | 
  openigtlink                             |      0 | {robotics-dev}                                                                   | 
+ openturns                               |      0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} | 
  openturns                               |      0 | {engineering-dev,mathematics-dev,meteorology-dev}                                | 
  openturns                               |      0 | {engineering-dev,meteorology-dev,mathematics-dev}                                | 
- openturns                               |      0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} | 
  psurface                                |      0 | {numericalcomputation}                                                           | 
  python-escript                          |      0 | {simulations,engineering,numericalcomputation}                                   | 
  qrupdate                                |      0 | {mathematics-dev}                                                                | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/a1a32e34aeef34c03db9460df0d32828f9b7054f

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