[med-svn] [Git][med-team/python-pyvcf][master] 5 commits: routine-update: Packaging update

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / python-pyvcf


Commits:
a081f637 by Andreas Tille at 2022-11-14T13:54:52+01:00
routine-update: Packaging update

- - - - -
4c93dc61 by Andreas Tille at 2022-11-14T13:54:52+01:00
routine-update: Standards-Version: 4.6.1

- - - - -
6ca4e9d2 by Andreas Tille at 2022-11-14T13:55:04+01:00
Apply multi-arch hints.
+ python-pyvcf-examples: Add Multi-Arch: foreign.

Changes-By: apply-multiarch-hints

- - - - -
36d626ee by Andreas Tille at 2022-11-14T14:00:23+01:00
Fix 'TypeError: "quotechar" must be a 1-character string'

- - - - -
cce0d4a1 by Andreas Tille at 2022-11-14T14:02:26+01:00
Upload to unstable

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/quitechar.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+python-pyvcf (0.6.8+git20170215.476169c-9) unstable; urgency=medium
+
+  * Packaging update
+  * Standards-Version: 4.6.1 (routine-update)
+  * Fix 'TypeError: "quotechar" must be a 1-character string'
+    Closes: #1024063
+
+ -- Andreas Tille <tille at debian.org>  Mon, 14 Nov 2022 14:00:33 +0100
+
 python-pyvcf (0.6.8+git20170215.476169c-8) unstable; urgency=medium
 
   * Team Upload.


=====================================
debian/control
=====================================
@@ -11,7 +11,7 @@ Build-Depends: debhelper-compat (= 13),
                python3-setuptools,
                python3-pytest <!nocheck>,
                python3-pysam <!nocheck>,
-Standards-Version: 4.6.0
+Standards-Version: 4.6.1
 Vcs-Browser: https://salsa.debian.org/med-team/python-pyvcf
 Vcs-Git: https://salsa.debian.org/med-team/python-pyvcf.git
 Homepage: https://github.com/jamescasbon/PyVCF
@@ -69,6 +69,7 @@ Package: python-pyvcf-examples
 Architecture: all
 Depends: ${misc:Depends}
 Suggests: python3-pyvcf
+Multi-Arch: foreign
 Description: Example data for Variant Call Format (VCF) parser for Python
  The Variant Call Format (VCF) specifies the format of a text file used
  in bioinformatics for storing gene sequence variations. The format has


=====================================
debian/patches/quitechar.patch
=====================================
@@ -0,0 +1,16 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Mon, 14 Nov 2022 13:54:52 +0100
+Bug-Debian: https://bugs.debian.org/1024063
+Description: Fix 'TypeError: "quotechar" must be a 1-character string'
+
+--- a/vcf/parser.py
++++ b/vcf/parser.py
+@@ -646,7 +646,7 @@ class Writer(object):
+     def __init__(self, stream, template, lineterminator="\n"):
+         self.writer = csv.writer(stream, delimiter="\t",
+                                  lineterminator=lineterminator,
+-                                 quotechar='', quoting=csv.QUOTE_NONE)
++                                 quoting=csv.QUOTE_NONE)
+         self.template = template
+         self.stream = stream
+ 


=====================================
debian/patches/series
=====================================
@@ -1,2 +1,3 @@
 fix-setuptools.patch
 2to3.patch
+quitechar.patch



View it on GitLab: https://salsa.debian.org/med-team/python-pyvcf/-/compare/19638e8dcd106affcb14664b0f420808d1f58f1d...cce0d4a145999761b2f8f55dfa74ea2e1f77f6dd

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-pyvcf/-/compare/19638e8dcd106affcb14664b0f420808d1f58f1d...cce0d4a145999761b2f8f55dfa74ea2e1f77f6dd
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