[med-svn] [Git][med-team/python-cogent][upstream] New upstream version 2022.8.24a1+dfsg

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / python-cogent


Commits:
c16e41e7 by Andreas Tille at 2022-09-29T09:27:13+02:00
New upstream version 2022.8.24a1+dfsg
- - - - -


30 changed files:

- + .github/ISSUE_TEMPLATE/bug_report.md
- + .github/ISSUE_TEMPLATE/custom.md
- + .github/ISSUE_TEMPLATE/feature_request.md
- .hgtags
- + .sourcery.yaml
- + CODE_OF_CONDUCT.md
- + CONTRIBUTING.md
- README.md
- changelog.md
- doc/conf.py
- pyproject.toml
- requirements.txt
- src/cogent3/__init__.py
- src/cogent3/align/__init__.py
- src/cogent3/align/align.py
- src/cogent3/align/compare_numba.py
- src/cogent3/align/dp_calculation.py
- src/cogent3/align/indel_model.py
- src/cogent3/align/indel_positions.py
- src/cogent3/align/pairwise.py
- src/cogent3/align/pairwise_pogs_numba.py
- src/cogent3/align/pairwise_seqs_numba.py
- src/cogent3/align/progressive.py
- src/cogent3/align/pycompare.py
- src/cogent3/align/traceback.py
- src/cogent3/app/__init__.py
- src/cogent3/app/align.py
- src/cogent3/app/composable.py
- src/cogent3/app/data_store.py
- src/cogent3/app/dist.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-cogent/-/commit/c16e41e75ac14ebf5c8846a6bfb0037e9c870638

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