[med-svn] [Git][med-team/relion][debian/master] fix more typos in cuda code paths

[Andreas Beckmann (@anbe)]

Andreas Beckmann pushed to branch debian/master at Debian Med / relion


Commits:
b20e39bb by Andreas Beckmann at 2022-09-29T14:14:03+02:00
fix more typos in cuda code paths

- - - - -


1 changed file:

- debian/patches/typos.patch


Changes:

=====================================
debian/patches/typos.patch
=====================================
@@ -129,3 +129,54 @@ Description: fix typos found by Lintian
  
  	if (fn_out[fn_out.size() - 1] != '/')
  		fn_out += "/";
+--- a/src/acc/cuda/cuda_autopicker.cu
++++ b/src/acc/cuda/cuda_autopicker.cu
+@@ -346,7 +346,7 @@ void AutoPickerCuda::autoPickOneMicrogra
+ 	{
+ 		have_warned_batching = true;
+ 		std::cerr << std::endl << "*-----------------------------WARNING------------------------------------------------*"<< std::endl;
+-		std::cerr 			   << "With the current settings the GPU memory is imposing a soft limit on your performace," << std::endl;
++		std::cerr 			   << "With the current settings the GPU memory is imposing a soft limit on your performance," << std::endl;
+ 		std::cerr 			   << "since one or more micrographs has to use (at least " << cudaTransformer1.batchSize.size() << ") batches of orientations to "<< std::endl;
+ 		std::cerr              << "achieve the total requested " << Npsi << " orientations. Consider using" << std::endl;
+ 		std::cerr			   << "\t higher --ang" << std::endl;
+--- a/src/error.h
++++ b/src/error.h
+@@ -155,13 +155,13 @@ Remember that the numbering of GPUs star
+ 
+ #define ERRGPUKERN ("\n\
+ A GPU-function failed to execute.\n\n \
+-If this occured at the start of a run, you might have GPUs which\n\
++If this occurred at the start of a run, you might have GPUs which\n\
+ are incompatible with either the data or your installation of relion.\n\
+ If you \n\n\
+ \t-> INSTALLED RELION YOURSELF: if you e.g. specified -DCUDA_ARCH=50\n\
+ \t   and are trying ot run on a compute 3.5 GPU (-DCUDA_ARCH=3.5), \n\
+ \t   this may happen.\n\n\
+-\t-> HAVE MULTIPLE GPUS OF DIFFERNT VERSIONS: relion needs GPUS with\n\
++\t-> HAVE MULTIPLE GPUS OF DIFFERENT VERSIONS: relion needs GPUS with\n\
+ \t   at least compute 3.5. You may be trying to use a GPU older than\n\
+ \t   this. If you have multiple generations, try specifying --gpu <X>\n\
+ \t   with X=0. Then try X=1 in a new run, and so on. The numbering of\n\
+--- a/src/gpu_utils/cuda_autopicker.cu
++++ b/src/gpu_utils/cuda_autopicker.cu
+@@ -329,7 +329,7 @@ void AutoPickerCuda::autoPickOneMicrogra
+ 	{
+ 		have_warned_batching = true;
+ 		std::cerr << std::endl << "*-----------------------------WARNING------------------------------------------------*"<< std::endl;
+-		std::cerr 			   << "With the current settings the GPU memory is imposing a soft limit on your performace," << std::endl;
++		std::cerr 			   << "With the current settings the GPU memory is imposing a soft limit on your performance," << std::endl;
+ 		std::cerr 			   << "since one or more micrographs has to use (at least " << cudaTransformer1.batchSize.size() << ") batches of orientations to "<< std::endl;
+ 		std::cerr              << "achieve the total requested " << Npsi << " orientations. Consider using" << std::endl;
+ 		std::cerr			   << "\t higher --ang" << std::endl;
+--- a/tests/catch2/catch.hpp
++++ b/tests/catch2/catch.hpp
+@@ -8206,7 +8206,7 @@ namespace Catch {
+         if ( !exceptions.empty() ) {
+             m_startupExceptions = true;
+             Colour colourGuard( Colour::Red );
+-            Catch::cerr() << "Errors occured during startup!" << '\n';
++            Catch::cerr() << "Errors occurred during startup!" << '\n';
+             // iterate over all exceptions and notify user
+             for ( const auto& ex_ptr : exceptions ) {
+                 try {



View it on GitLab: https://salsa.debian.org/med-team/relion/-/commit/b20e39bb8aca668eb8f4543417b1e13db7309442

-- 
View it on GitLab: https://salsa.debian.org/med-team/relion/-/commit/b20e39bb8aca668eb8f4543417b1e13db7309442
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