[med-svn] [Git][med-team/ivar][master] 2 commits: Remove -std=c++11 to fix autopkgtest failure with gcc 13

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / ivar


Commits:
52f87489 by Andreas Tille at 2023-08-08T07:49:37+02:00
Remove -std=c++11 to fix autopkgtest failure with gcc 13

- - - - -
d6bba35f by Andreas Tille at 2023-08-08T07:52:10+02:00
routine-update: Ready to upload to unstable

- - - - -


3 changed files:

- debian/changelog
- + debian/patches/gcc-13-2.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,11 @@
+ivar (1.4.2+dfsg-2) unstable; urgency=medium
+
+  [ Adrian Bunk ]
+  * Remove -std=c++11 to fix autopkgtest failure with gcc 13
+    Closes: #1043025
+
+ -- Andreas Tille <tille at debian.org>  Tue, 08 Aug 2023 07:50:30 +0200
+
 ivar (1.4.2+dfsg-1) unstable; urgency=medium
 
   * New upstream version


=====================================
debian/patches/gcc-13-2.patch
=====================================
@@ -0,0 +1,25 @@
+Description: Remove -std=c++11 to fix autopkgtest failure with gcc 13
+Last-Update: Fri, 04 Aug 2023 17:48:43 +0300
+Author: Adrian Bunk <bunk at debian.org>
+Bug-Debian: https://bugs.debian.org/1043025
+
+--- ivar-1.4.2+dfsg.orig/src/Makefile.am
++++ ivar-1.4.2+dfsg/src/Makefile.am
+@@ -1,6 +1,6 @@
+ LIBS = -lhts -lz -lpthread
+ 
+-CXXFLAGS += -v -g -std=c++11 -Wall -Wextra -Werror
++CXXFLAGS += -v -g -Wall -Wextra -Werror
+ 
+ # this lists the binaries to produce, the (non-PHONY, binary) targets in
+ # the previous manual Makefile
+--- ivar-1.4.2+dfsg.orig/tests/Makefile.am
++++ ivar-1.4.2+dfsg/tests/Makefile.am
+@@ -1,6 +1,6 @@
+ LIBS = -lhts -lz -lpthread
+ 
+-CXXFLAGS += -g -std=c++11 -Wall -Wextra -Werror
++CXXFLAGS += -g -Wall -Wextra -Werror
+ 
+ TESTS = check_primer_trim check_trim check_quality_trim check_consensus check_allele_depth check_consensus_threshold check_consensus_min_depth check_consensus_seq_id check_primer_bed check_getmasked check_removereads check_variants check_common_variants check_unpaired_trim check_primer_trim_edge_cases check_isize_trim check_interval_tree check_amplicon_search check_consensus_min_insert_threshold
+ check_PROGRAMS = check_primer_trim check_trim check_quality_trim check_consensus check_allele_depth check_consensus_threshold check_consensus_min_depth check_consensus_seq_id check_primer_bed check_getmasked check_removereads check_variants check_common_variants check_unpaired_trim check_primer_trim_edge_cases check_isize_trim check_interval_tree check_amplicon_search check_consensus_min_insert_threshold


=====================================
debian/patches/series
=====================================
@@ -2,3 +2,4 @@ Fix-warning.patch
 forward-build-options.patch
 privacy-breach.patch
 gcc-13.patch
+gcc-13-2.patch



View it on GitLab: https://salsa.debian.org/med-team/ivar/-/compare/b5ca597a44062543fbfa52cb491fb7a82ca6619c...d6bba35fa06ab3f3c39b4674fc6d53641e9c04da

-- 
View it on GitLab: https://salsa.debian.org/med-team/ivar/-/compare/b5ca597a44062543fbfa52cb491fb7a82ca6619c...d6bba35fa06ab3f3c39b4674fc6d53641e9c04da
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