[med-svn] [Git][med-team/macs][master] 10 commits: New upstream version 2.2.9.1

[Michael R. Crusoe (@crusoe)]

Michael R. Crusoe pushed to branch master at Debian Med / macs


Commits:
9388a902 by Michael R. Crusoe at 2023-08-09T11:46:34+02:00
New upstream version 2.2.9.1
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de24a331 by Michael R. Crusoe at 2023-08-09T11:51:51+02:00
Update upstream source from tag 'upstream/2.2.9.1'

Update to upstream version '2.2.9.1'
with Debian dir 8e275104c95adc26c96e0b58f35a9bf04a4ab6a1
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aad701e7 by Michael R. Crusoe at 2023-08-09T12:03:40+02:00
New upstream release.

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af90e303 by Michael R. Crusoe at 2023-08-09T12:03:53+02:00
d/patches: drop enable_python3.10.patch & no-pip.patch; they are no longer needed

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a7e0102d by Michael R. Crusoe at 2023-08-09T12:14:29+02:00
d/patches: forward patches upstream as appropriate.

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8cbbae67 by Michael R. Crusoe at 2023-08-09T12:17:54+02:00
no longer call dh_auto_clean to avoid call to "setup.py clean" which always runs cython.

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4203adf0 by Michael R. Crusoe at 2023-08-09T12:18:14+02:00
routine-update: Standards-Version: 4.6.2

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6bf3fa16 by Michael R. Crusoe at 2023-08-09T12:18:18+02:00
routine-update: Build-Depends: s/dh-python/dh-sequence-python3/

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eab0665d by Michael R. Crusoe at 2023-08-09T12:19:25+02:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.

Changes-By: lintian-brush

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c2322394 by Michael R. Crusoe at 2023-08-09T12:19:25+02:00
routine-update: Ready to upload to unstable

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30 changed files:

- + .github/workflows/build-and-test-MACS2-macos12.yml
- + .github/workflows/build-and-test-MACS2-non-x64.yml
- + .github/workflows/build-and-test-MACS2-x64.yml
- + .github/workflows/publish-to-pypi.yml
- − .travis.yml
- ChangeLog
- INSTALL.md
- MACS2/Constants.py
- − MACS2/IO/BedGraph.c
- − MACS2/IO/BedGraphIO.c
- − MACS2/IO/CallPeakUnit.c
- − MACS2/IO/FixWidthTrack.c
- − MACS2/IO/PairedEndTrack.c
- − MACS2/IO/Parser.c
- − MACS2/IO/PeakIO.c
- − MACS2/IO/ScoreTrack.c
- − MACS2/PeakDetect.c
- − MACS2/PeakModel.c
- − MACS2/Pileup.c
- − MACS2/Prob.c
- − MACS2/Signal.c
- − MACS2/Statistics.c
- MANIFEST.in
- README.md
- debian/changelog
- debian/control
- debian/copyright
- − debian/patches/enable_python3.10.patch
- debian/patches/keep_debug
- debian/patches/link-libm.patch


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/macs/-/compare/914370ee01b58230efce8e62635be4fdef2703b6...c2322394cfdde39f892b51305027630148c136e4

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View it on GitLab: https://salsa.debian.org/med-team/macs/-/compare/914370ee01b58230efce8e62635be4fdef2703b6...c2322394cfdde39f892b51305027630148c136e4
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