[med-svn] [Git][med-team/toil][master] 7 commits: routine-update: New upstream version

[Michael R. Crusoe (@crusoe)]

Michael R. Crusoe pushed to branch master at Debian Med / toil


Commits:
2376f3bc by Michael R. Crusoe at 2023-08-21T19:02:49+02:00
routine-update: New upstream version

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a3905459 by Michael R. Crusoe at 2023-08-21T19:02:51+02:00
New upstream version 5.12.0
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1e442906 by Michael R. Crusoe at 2023-08-21T19:03:13+02:00
Update upstream source from tag 'upstream/5.12.0'

Update to upstream version '5.12.0'
with Debian dir e71cb46ce678e73319ac64c795c2d1b6fd72ad84
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e9d62d0d by Michael R. Crusoe at 2023-08-21T19:03:26+02:00
routine-update: Build-Depends: s/dh-python/dh-sequence-python3/

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f1e5430c by Michael R. Crusoe at 2023-08-21T19:08:59+02:00
refreshed patches.

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4737c330 by Michael R. Crusoe at 2023-08-21T22:08:21+02:00
d/rules: wdltoil_test has a new path.

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6332a040 by Michael R. Crusoe at 2023-08-21T22:08:22+02:00
routine-update: Ready to upload to unstable

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30 changed files:

- .gitignore
- .gitlab-ci.yml
- + .readthedocs.yaml
- Makefile
- common.mk
- debian/changelog
- debian/control
- debian/patches/atomic_copy_as_alternative.patch
- debian/patches/debianize_docs
- debian/patches/no_galaxy_lib
- debian/patches/setting_version.patch
- debian/patches/skip_py_tes_dep
- debian/patches/soften-mesos-deps
- debian/patches/soften-pydocker-dep
- debian/rules
- debian/tests/run-unit-tests
- docs/contributing/contributing.rst
- docs/running/cliOptions.rst
- docs/running/cloud/clusterUtils.rst
- docs/running/hpcEnvironments.rst
- docs/running/server/wes.rst
- docs/running/wdl.rst
- requirements-aws.txt
- requirements-cwl.txt
- requirements-dev.txt
- requirements-google.txt
- requirements-wdl.txt
- setup.cfg
- src/toil/batchSystems/singleMachine.py
- src/toil/common.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/toil/-/compare/e634b9755cd870298a0a801f3dea07d6d52dda8d...6332a04075f52d6b8497ee303c69ea6a3693108e

-- 
View it on GitLab: https://salsa.debian.org/med-team/toil/-/compare/e634b9755cd870298a0a801f3dea07d6d52dda8d...6332a04075f52d6b8497ee303c69ea6a3693108e
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