[med-svn] [Git][med-team/python-pairix][master] 8 commits: routine-update: Packaging update

[Lance Lin (@linqigang)]

Lance Lin pushed to branch master at Debian Med / python-pairix


Commits:
33021c4c by Lance Lin at 2023-12-05T22:17:06+07:00
routine-update: Packaging update

- - - - -
57e2e1e9 by Lance Lin at 2023-12-05T22:17:48+07:00
routine-update: Standards-Version: 4.6.2

- - - - -
d830c858 by Lance Lin at 2023-12-05T22:17:51+07:00
routine-update: Build-Depends: s/dh-python/dh-sequence-python3/

- - - - -
215daff1 by Lance Lin at 2023-12-06T19:32:46+07:00
d/clean: Remove samples.tar.xz (Closes: #1046425)

- - - - -
12fb931d by Lance Lin at 2023-12-06T19:33:27+07:00
d/control: Add autopkgtest-pkg-pybuild testsuite

- - - - -
a90b5882 by Lance Lin at 2023-12-06T19:35:16+07:00
d/tests: Remove, run by pybuild autopkgtest

- - - - -
e1decf42 by Lance Lin at 2023-12-06T19:35:51+07:00
d/rules: Add hardening option

- - - - -
7a4b7dcd by Lance Lin at 2023-12-06T19:36:18+07:00
d/python3-pairix.lintian-overrides: Fix override for missing dependency on libc

- - - - -


7 changed files:

- debian/changelog
- + debian/clean
- debian/control
- debian/python3-pairix.lintian-overrides
- debian/rules
- − debian/tests/control
- − debian/tests/run-unit-test


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,18 @@
+python-pairix (0.3.7-7) UNRELEASED; urgency=medium
+
+  * Team upload.
+  * Packaging update
+  * Standards-Version: 4.6.2 (routine-update)
+  * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
+  * d/clean: Remove samples.tar.xz (Closes: #1046425)
+  * d/control: Add autopkgtest-pkg-pybuild testsuite
+  * d/tests: Remove, run by pybuild autopkgtest
+  * d/rules: Add hardening option
+  * d/python3-pairix.lintian-overrides: Fix override for missing dependency
+    on libc
+
+ -- Lance Lin <lq27267 at gmail.com>  Tue, 05 Dec 2023 21:45:09 +0700
+
 python-pairix (0.3.7-6) unstable; urgency=medium
 
   * Fix watch file


=====================================
debian/clean
=====================================
@@ -0,0 +1 @@
+samples.tar.xz


=====================================
debian/control
=====================================
@@ -2,14 +2,15 @@ Source: python-pairix
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>
 Section: science
+Testsuite: autopkgtest-pkg-pybuild
 Priority: optional
 Build-Depends: debhelper-compat (= 13),
-               dh-python,
+               dh-sequence-python3,
                python3-all-dev,
                python3-setuptools,
                zlib1g-dev,
                python3-pytest <!nocheck>
-Standards-Version: 4.6.1
+Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/python-pairix
 Vcs-Git: https://salsa.debian.org/med-team/python-pairix.git
 Homepage: https://github.com/4dn-dcic/pairix


=====================================
debian/python3-pairix.lintian-overrides
=====================================
@@ -1 +1 @@
-python3-pairix: missing-dependency-on-libc needed by usr/lib/python3/dist-packages/pypairix.cpython-310-x86_64-linux-gnu.so and 1 others
+python3-pairix: missing-dependency-on-libc needed by usr/lib/python3/dist-packages/pypairix.cpython-311-x86_64-linux-gnu.so


=====================================
debian/rules
=====================================
@@ -1,13 +1,14 @@
 #!/usr/bin/make -f
 
 # DH_VERBOSE := 1
+export DEB_BUILD_MAINT_OPTIONS = hardening=+all
 
 export PYBUILD_NAME=pairix
 
 export PYBUILD_BEFORE_TEST=cp -a $(CURDIR)/samples {build_dir}; cp -a $(CURDIR)/VERSION.txt {build_dir};
 
 %:
-	dh $@ --with python3 --buildsystem=pybuild
+	dh $@ --buildsystem=pybuild
 
 override_dh_install:
 	tar caf samples.tar.xz samples --mode=go=rX,u+rw,a-s --owner=0 --group=0 --numeric-owner --sort=name


=====================================
debian/tests/control deleted
=====================================
@@ -1,3 +0,0 @@
-Tests: run-unit-test
-Depends: @, python3-pytest
-Restrictions: allow-stderr


=====================================
debian/tests/run-unit-test deleted
=====================================
@@ -1,17 +0,0 @@
-#!/bin/bash
-set -e
-
-pkg=python3-pairix
-
-export LC_ALL=C.UTF-8
-if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
-  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
-#  trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
-fi
-
-cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"
-
-cd "${AUTOPKGTEST_TMP}"
-gunzip test/*.gz
-tar xaf samples.tar.xz
-pytest-3



View it on GitLab: https://salsa.debian.org/med-team/python-pairix/-/compare/91304269ebc609cb309a61b7a9a8c1beb0204fcd...7a4b7dcd8004959a53e6cc40348eeae676117c96

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-pairix/-/compare/91304269ebc609cb309a61b7a9a8c1beb0204fcd...7a4b7dcd8004959a53e6cc40348eeae676117c96
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20231206/091c6560/attachment-0001.htm>