[med-svn] [Git][med-team/samtools][master] 5 commits: New upstream version 1.19

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / samtools


Commits:
73082b5f by Étienne Mollier at 2023-12-15T16:06:55+01:00
New upstream version 1.19
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58f62524 by Étienne Mollier at 2023-12-15T16:06:55+01:00
routine-update: New upstream version

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73e62d8d by Étienne Mollier at 2023-12-15T16:07:12+01:00
Update upstream source from tag 'upstream/1.19'

Update to upstream version '1.19'
with Debian dir b967cbff08ac44966a6bd23088b8ca45d645757c
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b86781db by Étienne Mollier at 2023-12-15T16:11:51+01:00
d/rules: adjust dh_instalchangelogs.

Upstream NEWS file has been renamed NEWS.md.

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66fa6ba6 by Étienne Mollier at 2023-12-15T17:36:45+01:00
ready to upload to unstable.

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30 changed files:

- Makefile
- NEWS → NEWS.md
- README
- bam_cat.c
- bam_markdup.c
- bam_plcmd.c
- bam_sort.c
- bam_split.c
- bamtk.c
- coverage.c
- debian/changelog
- debian/rules
- doc/samtools-addreplacerg.1
- doc/samtools-ampliconclip.1
- doc/samtools-ampliconstats.1
- doc/samtools-bedcov.1
- doc/samtools-calmd.1
- doc/samtools-cat.1
- doc/samtools-collate.1
- doc/samtools-consensus.1
- doc/samtools-coverage.1
- doc/samtools-cram-size.1
- doc/samtools-depad.1
- doc/samtools-depth.1
- doc/samtools-dict.1
- doc/samtools-faidx.1
- doc/samtools-fasta.1
- doc/samtools-fixmate.1
- doc/samtools-flags.1
- doc/samtools-flagstat.1


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/samtools/-/compare/8c8f2a283c89f39f6dd42c20bd3e0e7578c72085...66fa6ba6c8d1a1bcfd03d942ab3cd78264632e4f

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View it on GitLab: https://salsa.debian.org/med-team/samtools/-/compare/8c8f2a283c89f39f6dd42c20bd3e0e7578c72085...66fa6ba6c8d1a1bcfd03d942ab3cd78264632e4f
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