[med-svn] [Git][med-team/gmap][master] 5 commits: d/control: add support for loong64 architecture.

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / gmap


Commits:
93bf76d1 by Étienne Mollier at 2023-12-20T17:20:38+01:00
d/control: add support for loong64 architecture.

Closes: #1059092

- - - - -
0e135c16 by Étienne Mollier at 2023-12-20T18:43:51+01:00
d/rules: update bindir and utildir.

This fixes the production of manual pages.

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62ffe174 by Étienne Mollier at 2023-12-20T18:47:44+01:00
d/rules: provide manual pages for gmapl and gsnapl.

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62fed594 by Étienne Mollier at 2023-12-20T19:03:52+01:00
d/gmap.lintian-overrides: override missing SIMD variant manuals.

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526e3281 by Étienne Mollier at 2023-12-20T19:05:04+01:00
ready to upload to unstable.

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4 changed files:

- debian/changelog
- debian/control
- debian/gmap.lintian-overrides
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,13 @@
+gmap (2023-12-01+ds-2) unstable; urgency=medium
+
+  * d/control: add support for loong64 architecture. (Closes: #1059092)
+  * d/rules: update bindir and utildir.
+    This fixes the production of manual pages.
+  * d/rules: provide manual pages for gmapl and gsnapl.
+  * d/gmap.lintian-overrides: override missing SIMD variant manuals.
+
+ -- Étienne Mollier <emollier at debian.org>  Wed, 20 Dec 2023 19:04:49 +0100
+
 gmap (2023-12-01+ds-1) unstable; urgency=medium
 
   * New upstream version


=====================================
debian/control
=====================================
@@ -19,7 +19,7 @@ Homepage: http://research-pub.gene.com/gmap
 Rules-Requires-Root: no
 
 Package: gmap
-Architecture: amd64 arm64 armel armhf i386 mips64el mipsel ppc64el riscv64
+Architecture: amd64 arm64 armel armhf i386 loong64 mips64el mipsel ppc64el riscv64
 #not s390x
 Depends: ${misc:Depends},
          ${perl:Depends},


=====================================
debian/gmap.lintian-overrides
=====================================
@@ -1 +1,4 @@
 gmap: spelling-error-in-binary ofO of [usr/lib/gmap/*]
+# Manual pages for each SIMD variant is probably not necessary.
+gmap: no-manual-page [usr/bin/gmap*.*]
+gmap: no-manual-page [usr/bin/gsnap*.*]


=====================================
debian/rules
=====================================
@@ -3,8 +3,8 @@
 export DEB_BUILD_MAINT_OPTIONS = hardening=+all
 include /usr/share/dpkg/default.mk
 mandir  := $(CURDIR)/debian/$(DEB_SOURCE)/usr/share/man/man1
-utildir := $(CURDIR)/util
-bindir  := $(CURDIR)/src
+utildir := $(CURDIR)/build/util
+bindir  := $(CURDIR)/build/src
 
 include /usr/share/dpkg/architecture.mk
 
@@ -60,6 +60,10 @@ override_dh_auto_install:
 	$(bindir)/gmap |debian/filter.pl >$(mandir)/gmap.1
 	$(HELP2MAN) --name='Genomic Short-read Nucleotide Alignment Program' \
 	$(bindir)/gsnap |debian/filter.pl >$(mandir)/gsnap.1
+	$(HELP2MAN) --name='Large Genome Mapping and Alignment Program' \
+	$(bindir)/gmapl |debian/filter.pl >$(mandir)/gmapl.1
+	$(HELP2MAN) --name='Large Genome Short-read Nucleotide Alignment Program' \
+	$(bindir)/gsnapl |debian/filter.pl >$(mandir)/gsnapl.1
 	$(HELP2MAN) --name='Tool for genome database creation for GMAP or GSNAP' \
 	$(utildir)/gmap_build |debian/filter.pl >$(mandir)/gmap_build.1
 ifeq (amd64,$(DEB_HOST_ARCH))



View it on GitLab: https://salsa.debian.org/med-team/gmap/-/compare/740c6f240513f6f6e7916db899b34cc9fb637131...526e328189ed6376ab3f3e7b660c8132a8bd706a

-- 
View it on GitLab: https://salsa.debian.org/med-team/gmap/-/compare/740c6f240513f6f6e7916db899b34cc9fb637131...526e328189ed6376ab3f3e7b660c8132a8bd706a
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