[med-svn] [Git][med-team/augur][upstream] New upstream version 20.0.0

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / augur


Commits:
03ec96f6 by Andreas Tille at 2023-02-01T14:59:24+01:00
New upstream version 20.0.0
- - - - -


25 changed files:

- .github/workflows/ci.yaml
- CHANGES.md
- augur/__version__.py
- augur/dates.py
- + augur/filter/__init__.py
- + augur/filter/_run.py
- augur/filter.py → augur/filter/include_exclude_rules.py
- + augur/filter/io.py
- + augur/filter/subsample.py
- + augur/filter/validate_arguments.py
- augur/frequency_estimators.py
- augur/titer_model.py
- augur/tree.py
- augur/utils.py
- + docs/api/developer/augur.filter._run.rst
- + docs/api/developer/augur.filter.include_exclude_rules.rst
- + docs/api/developer/augur.filter.io.rst
- docs/api/developer/augur.filter.rst
- + docs/api/developer/augur.filter.subsample.rst
- + docs/api/developer/augur.filter.validate_arguments.rst
- docs/contribute/DEV_DOCS.md
- setup.py
- tests/builds/zika.t
- tests/builds/zika/auspice/zika_tip-frequencies.json
- tests/data/titer_model/h3n2_titers_subset.tsv


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/augur/-/commit/03ec96f645bf6f4ff0ac5f9798753d38de30b55a

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