[med-svn] [Git][med-team/hyphy][upstream] New upstream version 2.5.47+dfsg

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / hyphy


Commits:
5a935bd6 by Andreas Tille at 2023-02-05T20:48:21+01:00
New upstream version 2.5.47+dfsg
- - - - -


2 changed files:

- − .github/workflows/release.yml
- src/core/matrix.cpp


Changes:

=====================================
.github/workflows/release.yml deleted
=====================================
@@ -1,23 +0,0 @@
-# This is a basic workflow to help you get started with Actions
-
-name: RELEASE
-
-# Controls when the action will run. Triggers the workflow on push or pull request 
-# events but only for the master branch
-on:
-  release:
-    types: [published]
-
-# A workflow run is made up of one or more jobs that can run sequentially or in parallel
-jobs:
-  # This workflow contains a single job called "build"
-  build:
-    # The type of runner that the job will run on
-    runs-on: ubuntu-latest
-
-    # Steps represent a sequence of tasks that will be executed as part of the job
-    steps:
-    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-    - uses: actions/checkout at v2
-    run: |
-      curl -XPOST -u "${{ secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json"  -H "Content-Type: application/json" https://api.github.com/repos/veg/datamonkey-js-server/dispatches --data '{"event_type": "hyphy_release"}'


=====================================
src/core/matrix.cpp
=====================================
@@ -2755,10 +2755,10 @@ HBLObjectRef   _Matrix::Evaluate (bool replace)
                     long k = result.theIndex[nz];
                     if (k != -1) {
                         long ri = k / vDim;
-                        if (diag_skip[k] == false) {
+                        if (diag_skip[ri] == false) {
                             long ci = k - ri * vDim;
                             if (ci != ri) {
-                                diag_storage[ri] -= result.theData[k];
+                                diag_storage[ri] -= result.theData[nz];
                             }
                         }
                     }



View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/commit/5a935bd63033021a63da20eb27106fac1b6f46b2

-- 
View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/commit/5a935bd63033021a63da20eb27106fac1b6f46b2
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