[med-svn] [Git][med-team/diamond-aligner][master] 8 commits: routine-update: New upstream version

[Michael R. Crusoe (@crusoe)]

Michael R. Crusoe pushed to branch master at Debian Med / diamond-aligner


Commits:
b09c2300 by Michael R. Crusoe at 2023-02-20T14:07:02+01:00
routine-update: New upstream version

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7407ab11 by Michael R. Crusoe at 2023-02-20T14:07:03+01:00
New upstream version 2.1.2
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d7ea31fa by Michael R. Crusoe at 2023-02-20T14:07:08+01:00
Update upstream source from tag 'upstream/2.1.2'

Update to upstream version '2.1.2'
with Debian dir a47d5d085872511a935eb7dae447fcdb03eff811
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b7d263f0 by Michael R. Crusoe at 2023-02-20T14:07:27+01:00
routine-update: Ready to upload to unstable

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628b5e8a by Michael R. Crusoe at 2023-02-23T17:30:48+01:00
routine-update: New upstream version

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065126df by Michael R. Crusoe at 2023-02-23T17:30:50+01:00
New upstream version 2.1.3
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8c563cfb by Michael R. Crusoe at 2023-02-23T17:30:53+01:00
Update upstream source from tag 'upstream/2.1.3'

Update to upstream version '2.1.3'
with Debian dir 56ab10cf4d074ba833f128be6a7e3637ce988b91
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4f42257f by Michael R. Crusoe at 2023-02-23T18:47:39+01:00
routine-update: Ready to upload to unstable

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30 changed files:

- + .cirrus.yml
- .github/workflows/cmake.yml
- .travis.yml
- CMakeLists.txt
- + azure-pipelines.yml
- debian/changelog
- src/ChangeLog
- src/align/align.cpp
- src/align/align.h
- src/align/culling.cpp
- src/align/extend.cpp
- src/align/gapped_final.cpp
- src/align/gapped_score.cpp
- src/align/global_ranking/global_ranking.cpp
- src/align/legacy/banded_swipe_pipeline.cpp
- + src/align/legacy/pipeline.h
- src/align/load_hits.h
- src/basic/basic.cpp
- src/basic/config.cpp
- src/basic/config.h
- src/basic/const.h
- src/basic/match.h
- src/cluster/cascaded/cascaded.cpp
- src/cluster/cascaded/cascaded.h
- src/cluster/cascaded/helpers.cpp
- src/cluster/cascaded/recluster.cpp
- src/cluster/cascaded/wrapper.cpp
- src/cluster/helpers.cpp
- src/cluster/output.cpp
- src/cluster/realign.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/c39c9c29d29de2449048284b276e4d425a0c8c21...4f42257f53d6490da5d2ecc2447244be6b649dd6

-- 
View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/c39c9c29d29de2449048284b276e4d425a0c8c21...4f42257f53d6490da5d2ecc2447244be6b649dd6
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