[med-svn] [Git][med-team/python-loompy][master] 3 commits: Adapt to numpy 1.24

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / python-loompy


Commits:
4f1dbcbf by Andreas Tille at 2023-01-12T08:53:47+01:00
Adapt to numpy 1.24

- - - - -
d85aa2c2 by Andreas Tille at 2023-01-12T08:54:06+01:00
routine-update: Standards-Version: 4.6.2

- - - - -
691b9a1c by Andreas Tille at 2023-01-12T08:56:25+01:00
routine-update: Ready to upload to unstable

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/numpy_1.24.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,10 +1,11 @@
-python-loompy (3.0.7+dfsg-2) UNRELEASED; urgency=medium
+python-loompy (3.0.7+dfsg-2) unstable; urgency=medium
 
   * Team upload.
   * Fix watch file
-  TODO: Wait until python3-llvmlite (precondition for python3-numba) is installable again
+  * Adapt to numpy 1.24
+  * Standards-Version: 4.6.2 (routine-update)
 
- -- Andreas Tille <tille at debian.org>  Tue, 19 Jul 2022 14:35:29 +0200
+ -- Andreas Tille <tille at debian.org>  Thu, 12 Jan 2023 08:54:23 +0100
 
 python-loompy (3.0.7+dfsg-1) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -14,7 +14,7 @@ Build-Depends: debhelper-compat (= 13),
                python3-scipy <!nocheck>,
                python3-numpy-groupies <!nocheck>,
                python3-pytest <!nocheck>
-Standards-Version: 4.6.1
+Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/python-loompy
 Vcs-Git: https://salsa.debian.org/med-team/python-loompy.git
 Homepage: https://github.com/linnarsson-lab/loompy


=====================================
debian/patches/numpy_1.24.patch
=====================================
@@ -0,0 +1,19 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Thu, 12 Jan 2023 08:52:44 +0100
+Description: Adapt to numpy 1.24
+
+--- a/tests/test_connection.py
++++ b/tests/test_connection.py
+@@ -14,10 +14,10 @@ class LoomConnectionTests(TestCase):
+             self.file.name,
+             np.random.random((5, 5)),
+             row_attrs={
+-                "key": np.fromiter(range(5), dtype=np.int)
++                "key": np.fromiter(range(5), dtype=int)
+             },
+             col_attrs={
+-                "key": np.fromiter(range(5), dtype=np.int)
++                "key": np.fromiter(range(5), dtype=int)
+             })
+ 
+     def tearDown(self) -> None:


=====================================
debian/patches/series
=====================================
@@ -1 +1,2 @@
 tests-open-loom-write-permissions.patch
+numpy_1.24.patch



View it on GitLab: https://salsa.debian.org/med-team/python-loompy/-/compare/a8861476b44aef0671e16b957b34a66d7f8cef3f...691b9a1c34d53eb86a17dc5eab72a36ac53f78be

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-loompy/-/compare/a8861476b44aef0671e16b957b34a66d7f8cef3f...691b9a1c34d53eb86a17dc5eab72a36ac53f78be
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