[med-svn] [Git][med-team/snippy][master] 6 commits: routine-update: Packaging update

[Pierre Gruet (@pgt)]

Pierre Gruet pushed to branch master at Debian Med / snippy


Commits:
fb8a0355 by Pierre Gruet at 2023-01-21T10:29:49+01:00
routine-update: Packaging update

- - - - -
bfdf0794 by Pierre Gruet at 2023-01-21T10:29:49+01:00
routine-update: Standards-Version: 4.6.2

- - - - -
629f7bf2 by Pierre Gruet at 2023-01-21T10:30:19+01:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html

- - - - -
bdddbf6d by Pierre Gruet at 2023-01-21T10:30:25+01:00
Apply multi-arch hints.
+ snippy-examples: Add Multi-Arch: foreign.

Changes-By: apply-multiarch-hints

- - - - -
a6bc0988 by Pierre Gruet at 2023-01-21T11:04:00+01:00
Marking the patches as Forwarded: not-needed

- - - - -
258493dc by Pierre Gruet at 2023-01-21T11:05:15+01:00
Upload to unstable

- - - - -


5 changed files:

- debian/changelog
- debian/control
- debian/patches/debian_packaged_libs.patch
- debian/patches/snpeff.config.patch
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,13 @@
+snippy (4.6.0+dfsg-2) unstable; urgency=medium
+
+  * Team upload.
+  * Standards-Version: 4.6.2 (routine-update)
+  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse.
+  * Apply multi-arch hints. + snippy-examples: Add Multi-Arch: foreign.
+  * Marking the patches as Forwarded: not-needed
+
+ -- Pierre Gruet <pgt at debian.org>  Sat, 21 Jan 2023 11:04:04 +0100
+
 snippy (4.6.0+dfsg-1) unstable; urgency=medium
 
   * Initial release (Closes: #1023283)


=====================================
debian/control
=====================================
@@ -19,7 +19,7 @@ Build-Depends: debhelper-compat (= 13),
                snp-sites <!nocheck>,
                snpeff <!nocheck>,
                vt <!nocheck>
-Standards-Version: 4.6.1
+Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/snippy
 Vcs-Git: https://salsa.debian.org/med-team/snippy.git
 Homepage: https://github.com/tseemann/snippy/
@@ -58,6 +58,7 @@ Package: snippy-examples
 Architecture: all
 Depends: ${misc:Depends}
 Recommends: snippy
+Multi-Arch: foreign
 Description: rapid haploid variant calling and core genome alignment (examples)
  Snippy finds SNPs between a haploid reference genome and your NGS
  sequence reads. It will find both substitutions (snps) and


=====================================
debian/patches/debian_packaged_libs.patch
=====================================
@@ -1,6 +1,7 @@
 Author: Andreas Tille <tille at debian.org>
 Last-Update: Tue, 01 Nov 2022 10:07:59 +0100
 Description: Several scripts are contained in /usr/share/freebayes/scripts
+Forwarded: not-needed
 
 --- a/bin/snippy
 +++ b/bin/snippy


=====================================
debian/patches/snpeff.config.patch
=====================================
@@ -1,6 +1,7 @@
 Author: Andreas Tille <tille at debian.org>
 Last-Update: Tue, 01 Nov 2022 10:07:59 +0100
 Description: Find snpeff.config at the right place
+Forwarded: not-needed
 
 --- a/bin/snippy
 +++ b/bin/snippy


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,6 @@
+Bug-Database: https://github.com/tseemann/snippy/issues
+Bug-Submit: https://github.com/tseemann/snippy/issues/new
 Registry:
  - Name: conda:bioconda
    Entry: snippy
+Repository-Browse: https://github.com/tseemann/snippy



View it on GitLab: https://salsa.debian.org/med-team/snippy/-/compare/dd1cd597023ae80bf0d7fa13f2f7e9a08a792845...258493dcbfa404ff33644f4ac108788d30e93119

-- 
View it on GitLab: https://salsa.debian.org/med-team/snippy/-/compare/dd1cd597023ae80bf0d7fa13f2f7e9a08a792845...258493dcbfa404ff33644f4ac108788d30e93119
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