[med-svn] [Git][med-team/last-align][debian/experimental] 111 commits: routine-update: New upstream version

Sun Jan 22 16:30:34 GMT 2023

Michael R. Crusoe pushed to branch debian/experimental at Debian Med / last-align

Commits:
1a4833db by Nilesh Patra at 2020-12-31T17:03:56+05:30
routine-update: New upstream version

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214cac8d by Nilesh Patra at 2020-12-31T17:03:58+05:30
New upstream version 1170
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8fcf2651 by Nilesh Patra at 2020-12-31T17:04:00+05:30
Update upstream source from tag 'upstream/1170'

Update to upstream version '1170'
with Debian dir 3912da0db1b569bb83b3cdbff3eb52205556e6a0
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a7ac4f8e by Nilesh Patra at 2020-12-31T17:04:25+05:30
routine-update: Ready to upload to unstable

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b1aa1a09 by Nilesh Patra at 2021-01-28T17:19:21+05:30
routine-update: New upstream version

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d1b788bb by Nilesh Patra at 2021-01-28T17:19:22+05:30
New upstream version 1178
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ca7cb66b by Nilesh Patra at 2021-01-28T17:19:24+05:30
Update upstream source from tag 'upstream/1178'

Update to upstream version '1178'
with Debian dir 9e43e6b6d6ffbe8a3d7b42adf27d7b08fb4308f0
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490be624 by Nilesh Patra at 2021-01-28T17:19:32+05:30
routine-update: Ready to upload to unstable

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fbad3bb0 by Nilesh Patra at 2021-02-01T16:02:24+05:30
routine-update: New upstream version

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038e0863 by Nilesh Patra at 2021-02-01T16:02:24+05:30
New upstream version 1179
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b7d61639 by Nilesh Patra at 2021-02-01T16:02:26+05:30
Update upstream source from tag 'upstream/1179'

Update to upstream version '1179'
with Debian dir bb6788cb7dbe04f19146c9b3d7f77b98dc76aee6
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116f344f by Nilesh Patra at 2021-02-01T16:02:34+05:30
routine-update: Ready to upload to unstable

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a5f8aff2 by Nilesh Patra at 2021-03-05T10:44:24+05:30
[skip ci] Update email

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f4a65161 by Nilesh Patra at 2021-04-17T15:54:43+05:30
d/watch: Fix fetch URL - last-align has moved to gitlab

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3c58102a by Nilesh Patra at 2021-04-19T17:27:31+05:30
New upstream version 1219
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dfdbb135 by Nilesh Patra at 2021-04-19T17:27:38+05:30
Update upstream source from tag 'upstream/1219'

Update to upstream version '1219'
with Debian dir 809b36228f7b2eaec86a6cb156275fda52b7850b
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688d8516 by Nilesh Patra at 2021-04-19T17:30:57+05:30
d/p/2to3.patch: scripts has moved to bin, change

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bda140d7 by Nilesh Patra at 2021-04-19T17:37:27+05:30
d/p/helpMakefiles.patch: Refresh helpmakefile.patch

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9bcfc81e by Nilesh Patra at 2021-04-19T18:39:46+05:30
d/p/simde: Attempt adapting simde to new upstream

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6c25e326 by Nilesh Patra at 2021-04-19T20:30:51+05:30
d/rules: Attempt adapting to new upstream version

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d5c87c72 by Nilesh Patra at 2021-04-19T21:02:53+05:30
Add shebang for fasta-nr

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7ca48105 by Nilesh Patra at 2021-04-19T21:03:34+05:30
d/debian/last-align.doc-base.last-align-manual: The manual page has moved to last-cookbook.rst

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9282fd5a by Nilesh Patra at 2021-04-19T21:04:20+05:30
Interim changelog entry

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cf76fa7e by Nilesh Patra at 2021-05-28T22:21:44+05:30
New upstream version 1243
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8d1d2bc2 by Nilesh Patra at 2021-05-28T22:21:54+05:30
Update upstream source from tag 'upstream/1243'

Update to upstream version '1243'
with Debian dir 5faa1ca619b8a4b90bd094c907864f3a1a4ee6ed
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d0fe45ab by Nilesh Patra at 2021-05-28T22:24:31+05:30
Refresh patch

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01ca87d3 by Nilesh Patra at 2021-05-28T22:26:00+05:30
Interim changelog entry

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1f3e111a by Nilesh Patra at 2021-06-03T00:19:02+05:30
[skip ci] d/watch: Use better regex

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52919d39 by Nilesh Patra at 2021-06-03T01:55:28+05:30
[skip ci] d/control: Fix homepage

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df0719ce by Nilesh Patra at 2021-07-11T01:58:08+05:30
New upstream version 1250
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6c273eac by Nilesh Patra at 2021-07-11T02:05:35+05:30
New upstream version 1250
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9e046023 by Nilesh Patra at 2021-07-11T02:05:35+05:30
Refresh patch

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bf1432f5 by Nilesh Patra at 2021-07-11T02:05:35+05:30
Interim changelog entry

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faa6e1cd by Andreas Tille at 2021-08-05T22:19:22+02:00
DEP3

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c89be754 by Nilesh Patra at 2021-08-06T13:15:53+05:30
Add additional tests

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7a532a90 by Nilesh Patra at 2021-08-06T13:29:07+05:30
Remove debug statements

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f5f90b0c by Nilesh Patra at 2021-08-06T13:35:24+05:30
Move python3 to Depends

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4bb29a02 by Nilesh Patra at 2021-08-06T13:38:29+05:30
d/salsa-ci.yml: Disable blhc and reprotest

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a485a615 by Nilesh Patra at 2021-08-06T09:04:44+00:00
d/rules: Add rest manpages, install fastq-interleave

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c2204c68 by Nilesh Patra at 2021-08-06T14:42:28+05:30
Add lintian override for maf-cut manpage

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3c063793 by Nilesh Patra at 2021-08-06T14:50:29+05:30
Remove allow-stderr restriction on last-test

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95c8dfbb by Nilesh Patra at 2021-08-06T14:55:34+05:30
Interim changelog entry

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b0667885 by Nilesh Patra at 2021-08-06T15:01:04+05:30
Minor fix

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1ff64d32 by Nilesh Patra at 2021-08-06T20:11:53+05:30
New upstream version 1254
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76204be1 by Nilesh Patra at 2021-08-06T20:12:02+05:30
Update upstream source from tag 'upstream/1254'

Update to upstream version '1254'
with Debian dir bc25536f1c4f21d53e383b5d9c6385fb230b3b3e
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0d74a463 by Nilesh Patra at 2021-08-06T20:13:20+05:30
Interim changelog entry

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90c3a174 by Nilesh Patra at 2021-08-09T17:19:09+05:30
Remove fix-959866.patch: Fixed internally in simde

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60b445b9 by Nilesh Patra at 2021-08-09T17:24:57+05:30
Drop 2to3.patch, fix shebang

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ad501126 by Nilesh Patra at 2021-08-09T17:33:48+05:30
Interim changelog entry

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fd8c7492 by Nilesh Patra at 2021-08-23T00:56:24+05:30
routine-update: New upstream version

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b3ca634d by Nilesh Patra at 2021-08-23T00:56:26+05:30
New upstream version 1256
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3e205da7 by Nilesh Patra at 2021-08-23T00:56:35+05:30
Update upstream source from tag 'upstream/1256'

Update to upstream version '1256'
with Debian dir 83550923f4c3323e5d8d894fa86b696262a3696e
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6ff84ca5 by Nilesh Patra at 2021-08-23T00:57:43+05:30
routine-update: Ready to upload to unstable

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b01cab59 by Vagrant Cascadian at 2022-01-10T09:37:58+01:00
debian/rules, simd-dispatch: Pass an environment variable to use the plain variant to when building manpages with help2man.

The relevent simd variant of the build environment is embedded in the
manpage, breaking build reproducibility depending on the cpu features
of the running build environment.

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ad46d4b4 by Andreas Tille at 2022-01-10T09:41:28+01:00
Do not embed cpu-specific features in manpages

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9bf099a2 by Andreas Tille at 2022-01-10T09:42:41+01:00
Re-enable reprotest in Salca-CI to see whether the means above are working properly

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16dc9571 by Andreas Tille at 2022-01-10T09:43:12+01:00
routine-update: New upstream version

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08c0f517 by Andreas Tille at 2022-01-10T09:43:12+01:00
New upstream version 1257
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43cb47e8 by Andreas Tille at 2022-01-10T09:43:19+01:00
Update upstream source from tag 'upstream/1257'

Update to upstream version '1257'
with Debian dir e871743ce190974de5be73c0780988d22bb02559
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c4da81d3 by Andreas Tille at 2022-01-10T09:43:19+01:00
routine-update: Standards-Version: 4.6.0

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c3852a7f by Andreas Tille at 2022-01-10T09:43:31+01:00
Add missing build dependency on dh addon.

Changes-By: lintian-brush
Fixes: lintian: missing-build-dependency-for-dh_-command
See-also: https://lintian.debian.org/tags/missing-build-dependency-for-dh_-command.html

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92585f43 by Andreas Tille at 2022-01-10T09:52:42+01:00
Refresh patches

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aedcfb14 by Andreas Tille at 2022-01-10T10:07:04+01:00
Upload to unstable

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0317c45a by Nilesh Patra at 2022-01-11T13:54:10+05:30
d/rules: Pass CFLAGS and CXXFLAGS directly to dh_auto_build rather than exporting

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fa827746 by Nilesh Patra at 2022-01-11T13:54:16+05:30
d/rules: export LC_ALL and LANG to use C.UTF-8

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5204a709 by Nilesh Patra at 2022-01-11T13:56:57+05:30
Upload to unstable

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7d8889ea by Nilesh Patra at 2022-02-16T16:39:14+05:30
New upstream version 1260
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789aeab8 by Nilesh Patra at 2022-02-16T16:39:18+05:30
Update upstream source from tag 'upstream/1260'

Update to upstream version '1260'
with Debian dir d29fabec637bae4f674e614a6e3498d96d631707
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5850c22b by Nilesh Patra at 2022-02-16T16:41:14+05:30
Upload to unstable

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8452e4ce by Nilesh Patra at 2022-02-26T23:50:43+05:30
New upstream version 1268
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0875aa61 by Nilesh Patra at 2022-02-26T23:50:48+05:30
Update upstream source from tag 'upstream/1268'

Update to upstream version '1268'
with Debian dir d0b5b91104aa4387f79c099d12a6b5c909aedede
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d66071ad by Nilesh Patra at 2022-02-26T23:52:53+05:30
Upload to unstable

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f4a6eafe by Nilesh Patra at 2022-05-04T14:40:05+05:30
New upstream version 1282
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38cb2130 by Nilesh Patra at 2022-05-04T14:40:12+05:30
Update upstream source from tag 'upstream/1282'

Update to upstream version '1282'
with Debian dir d4c311804b8c5154b1935fe27cc2f91e9abd76dd
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88d8ded5 by Nilesh Patra at 2022-05-04T15:08:15+05:30
Refresh patches

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04dde6a2 by Nilesh Patra at 2022-05-04T15:10:05+05:30
Upload to unstable

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a87dec4f by Nilesh Patra at 2022-05-29T19:11:55+05:30
New upstream version 1296
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84377568 by Nilesh Patra at 2022-05-29T19:12:00+05:30
Update upstream source from tag 'upstream/1296'

Update to upstream version '1296'
with Debian dir 5ad1f4db1f2c22ccc01dc76e8a9ba62239a9a5d2
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71f98fd6 by Nilesh Patra at 2022-05-29T19:12:36+05:30
Bump Standards-Version to 4.6.1 (no changes needed)

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ad07ecda by Nilesh Patra at 2022-05-29T19:13:07+05:30
Upload to unstable

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28cbd6e5 by Nilesh Patra at 2022-06-26T00:46:06+05:30
New upstream version 1356
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e54d0230 by Nilesh Patra at 2022-06-26T00:46:12+05:30
Update upstream source from tag 'upstream/1356'

Update to upstream version '1356'
with Debian dir d99889984c9315d0e7b10436d1a1651928f36d04
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c31c0995 by Nilesh Patra at 2022-06-26T00:47:13+05:30
Releasing 1356-1 to unstable

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ccce5e22 by Andreas Tille at 2022-07-14T16:34:02+02:00
routine-update: New upstream version

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8e061678 by Andreas Tille at 2022-07-14T16:34:02+02:00
New upstream version 1389
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ba838b1b by Andreas Tille at 2022-07-14T16:34:05+02:00
Update upstream source from tag 'upstream/1389'

Update to upstream version '1389'
with Debian dir a54fe4aa4b0f40c929b5c9ce188b60ea7be97e6b
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be7ef576 by Andreas Tille at 2022-07-14T16:39:32+02:00
Update patches

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29979bca by Andreas Tille at 2022-07-14T16:43:39+02:00
Upload to unstable

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fa010659 by Andreas Tille at 2022-07-28T16:48:48+02:00
routine-update: New upstream version

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b82bbbbd by Andreas Tille at 2022-07-28T16:48:48+02:00
New upstream version 1406
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cc86b5b9 by Andreas Tille at 2022-07-28T16:48:52+02:00
Update upstream source from tag 'upstream/1406'

Update to upstream version '1406'
with Debian dir d9fceb993cb17ea77facd246f97e7b6b6371112d
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8a14ea7e by Andreas Tille at 2022-07-28T16:53:21+02:00
routine-update: Ready to upload to unstable

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350f1ca9 by Andreas Tille at 2022-08-23T16:53:18+02:00
routine-update: New upstream version

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e4599bc1 by Andreas Tille at 2022-08-23T16:53:19+02:00
New upstream version 1407
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1aa1662f by Andreas Tille at 2022-08-23T16:53:22+02:00
Update upstream source from tag 'upstream/1407'

Update to upstream version '1407'
with Debian dir ae44766a7a285548412d4c07245e997e7e4ce5f3
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ee8f19cf by Andreas Tille at 2022-08-23T16:58:10+02:00
routine-update: Ready to upload to unstable

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110528af by Andreas Tille at 2022-09-22T09:28:02+02:00
routine-update: New upstream version

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b6c8fddb by Andreas Tille at 2022-09-22T09:28:02+02:00
New upstream version 1411
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2e8a1de2 by Andreas Tille at 2022-09-22T09:28:08+02:00
Update upstream source from tag 'upstream/1411'

Update to upstream version '1411'
with Debian dir 3077054877cc7ee6fb5b7dc0a287f70b043a116f
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a227e9e3 by Andreas Tille at 2022-09-22T09:36:30+02:00
routine-update: Ready to upload to unstable

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d7b8961a by Nilesh Patra at 2022-10-01T00:28:58+05:30
[skip ci] Remove myself from uploaders

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3ed49664 by Charles Plessy at 2022-10-19T09:29:15+09:00
routine-update: New upstream version

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65a863b5 by Charles Plessy at 2022-10-19T09:29:15+09:00
New upstream version 1418
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f0b46b54 by Charles Plessy at 2022-10-19T09:29:18+09:00
Update upstream source from tag 'upstream/1418'

Update to upstream version '1418'
with Debian dir 18b921c6730843bb31bf1f9865f4337be52808b0
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75b5dac6 by Charles Plessy at 2022-10-19T09:33:29+09:00
routine-update: Ready to upload to unstable

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fc3168a7 by Nilesh Patra at 2022-12-31T17:16:13+05:30
Add myself back to uploaders

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b38e2fed by Nilesh Patra at 2022-12-31T17:18:15+05:30
New upstream version 1420
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c6f0c617 by Nilesh Patra at 2022-12-31T17:18:19+05:30
Update upstream source from tag 'upstream/1420'

Update to upstream version '1420'
with Debian dir 9d79de9dd248ebd0a9c9a3309322d08ce2007661
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d4486409 by Nilesh Patra at 2022-12-31T17:18:22+05:30
Bump Standards-Version to 4.6.2 (no changes needed)

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dd2ce64c by Nilesh Patra at 2022-12-31T17:18:33+05:30
Upload to unstable

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17dda444 by Michael R. Crusoe at 2023-01-22T17:28:50+01:00
Experimental rebuild with SIMDe 0.7.3~0git20230118123246.d1e75cd

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2 changed files:

- + .gitattributes
- + .gitignore

The diff was not included because it is too large.

View it on GitLab: https://salsa.debian.org/med-team/last-align/-/compare/70cd39ef288037dfd320b56bd5c79b36cdda28c8...17dda4442a88e4b484c7509d35dccf7096d7599a

-- 
View it on GitLab: https://salsa.debian.org/med-team/last-align/-/compare/70cd39ef288037dfd320b56bd5c79b36cdda28c8...17dda4442a88e4b484c7509d35dccf7096d7599a
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