[med-svn] [Git][med-team/plink2][debian/experimental] 87 commits: New upstream version 2.00~a3-210104+dfsg

Michael R. Crusoe (@crusoe) gitlab at salsa.debian.org
Sun Jan 22 17:43:58 GMT 2023



Michael R. Crusoe pushed to branch debian/experimental at Debian Med / plink2


Commits:
1cd82bbf by Michael R. Crusoe at 2021-01-07T14:35:28+01:00
New upstream version 2.00~a3-210104+dfsg
- - - - -
2044539e by Michael R. Crusoe at 2021-01-07T14:35:30+01:00
Update upstream source from tag 'upstream/2.00_a3-210104+dfsg'

Update to upstream version '2.00~a3-210104+dfsg'
with Debian dir a6e714f7fa0be710543ec844c3d7f56fac925397
- - - - -
ddcd95ec by Michael R. Crusoe at 2021-01-07T14:35:55+01:00
New upstream release.

- - - - -
e422cbf3 by Michael R. Crusoe at 2021-01-07T14:36:51+01:00
Add '-latomic' for mipsel, m68k, and powerpc as well

- - - - -
93871111 by Michael R. Crusoe at 2021-01-07T14:39:19+01:00
Remove debian/patches/portable_m128i_setting, it was applied upstream.

- - - - -
8fb4d070 by Michael R. Crusoe at 2021-01-07T14:40:07+01:00
routine-update: Ready to upload to unstable

- - - - -
6c3e8051 by Michael R. Crusoe at 2021-01-17T10:00:13+01:00
debian/watch: assume all upstream versions are prefixed with "2.00~a3-"

- - - - -
75e93bdd by Michael R. Crusoe at 2021-01-17T10:00:43+01:00
routine-update: New upstream version

- - - - -
b3bdaa5c by Michael R. Crusoe at 2021-01-17T10:00:44+01:00
New upstream version 2.00~a3-210116+dfsg
- - - - -
4eebee14 by Michael R. Crusoe at 2021-01-17T10:00:46+01:00
Update upstream source from tag 'upstream/2.00_a3-210116+dfsg'

Update to upstream version '2.00~a3-210116+dfsg'
with Debian dir a233588a93ac5443b4ef3402db5e2134f1a40290
- - - - -
77ed2da0 by Michael R. Crusoe at 2021-01-17T10:00:51+01:00
Remove obsolete field Contact from debian/upstream/metadata (already present in machine-readable debian/copyright).

Changes-By: lintian-brush

- - - - -
471ec6e3 by Michael R. Crusoe at 2021-01-17T10:07:46+01:00
debian/patches/baseline: respect Debian's architecture baselines

- - - - -
dc83f84b by Michael R. Crusoe at 2021-01-17T12:46:39+01:00
routine-update: Ready to upload to unstable

- - - - -
bb121fcb by Michael R. Crusoe at 2021-01-21T12:50:10+01:00
routine-update: New upstream version

- - - - -
71771f5c by Michael R. Crusoe at 2021-01-21T12:50:11+01:00
New upstream version 2.00~a3-210118+dfsg
- - - - -
15f81e61 by Michael R. Crusoe at 2021-01-21T12:50:13+01:00
Update upstream source from tag 'upstream/2.00_a3-210118+dfsg'

Update to upstream version '2.00~a3-210118+dfsg'
with Debian dir fd36780d58b6ea354f57dd70628c8f5efa84ad86
- - - - -
81f13f7f by Michael R. Crusoe at 2021-01-21T12:50:16+01:00
routine-update: Ready to upload to unstable

- - - - -
c1a0165c by Michael R. Crusoe at 2021-01-27T10:51:47+01:00
debian/rules: typo was causing FTBFS on mipsel

- - - - -
40a8bbef by Michael R. Crusoe at 2021-01-27T11:58:21+01:00
release 2.00~a3-210118+dfsg-2

- - - - -
e28c72c7 by Dylan Aïssi at 2021-02-04T11:52:45+01:00
routine-update: New upstream version

- - - - -
7ff3416e by Dylan Aïssi at 2021-02-04T11:52:45+01:00
New upstream version 2.00~a3-210203+dfsg
- - - - -
de0b1f7e by Dylan Aïssi at 2021-02-04T11:52:48+01:00
Update upstream source from tag 'upstream/2.00_a3-210203+dfsg'

Update to upstream version '2.00~a3-210203+dfsg'
with Debian dir d9c5eaea75e9e0f0370f3d1289079d32801aebbd
- - - - -
cbbaa513 by Dylan Aïssi at 2021-02-04T11:52:51+01:00
Remove obsolete field Name from debian/upstream/metadata (already present in machine-readable debian/copyright).
- - - - -
c7de8ea8 by Dylan Aïssi at 2021-02-04T12:01:48+01:00
routine-update: Ready to upload to unstable

- - - - -
cce84c08 by Dylan Aïssi at 2021-02-04T12:12:13+01:00
Update upstream changelog

- - - - -
dd37e023 by Dylan Aïssi at 2021-07-23T21:49:18+02:00
New upstream version 2.00~a3-210701+dfsg
- - - - -
52ff17d8 by Dylan Aïssi at 2021-07-23T21:49:21+02:00
Update upstream source from tag 'upstream/2.00_a3-210701+dfsg'

Update to upstream version '2.00~a3-210701+dfsg'
with Debian dir 1a532024f15d7baeaed7a5c3387acd594edc4880
- - - - -
d2773ed4 by Dylan Aïssi at 2021-07-23T21:50:27+02:00
Bump d/changelog

- - - - -
92c9e36a by Dylan Aïssi at 2021-07-23T21:56:28+02:00
Update upstream changelog

- - - - -
478fa15a by Dylan Aïssi at 2021-08-21T09:50:23+02:00
New upstream version 2.00~a3-210816+dfsg
- - - - -
a762dc29 by Dylan Aïssi at 2021-08-21T09:50:26+02:00
Update upstream source from tag 'upstream/2.00_a3-210816+dfsg'

Update to upstream version '2.00~a3-210816+dfsg'
with Debian dir b921c7e92c96dedd2e292b16f616a11d0d0cfae6
- - - - -
f8a31868 by Dylan Aïssi at 2021-08-21T09:50:59+02:00
Bump d/changelog

- - - - -
eb30f9d0 by Dylan Aïssi at 2021-08-21T09:51:52+02:00
Upload to unstable

- - - - -
da0c9c7f by Dylan Aïssi at 2021-11-19T17:06:12+01:00
New upstream version 2.00~a3-211011+dfsg
- - - - -
5b604280 by Dylan Aïssi at 2021-11-19T17:06:15+01:00
Update upstream source from tag 'upstream/2.00_a3-211011+dfsg'

Update to upstream version '2.00~a3-211011+dfsg'
with Debian dir 72172a571c30873287dd1c53b55504aacc9ce035
- - - - -
60e22dd4 by Dylan Aïssi at 2021-11-19T17:07:49+01:00
Bump changelogs

- - - - -
89452184 by Dylan Aïssi at 2021-11-19T17:18:09+01:00
Release plink2 version 2.00~a3-211011+dfsg-1

- - - - -
ffd32fc5 by Dylan Aïssi at 2021-12-04T09:28:50+01:00
New upstream version 2.00~a3-211125+dfsg
- - - - -
e7d01cb5 by Dylan Aïssi at 2021-12-04T09:28:53+01:00
Update upstream source from tag 'upstream/2.00_a3-211125+dfsg'

Update to upstream version '2.00~a3-211125+dfsg'
with Debian dir d0722f1248027584f84c06cc8e84c304256d5164
- - - - -
8cb62d77 by Dylan Aïssi at 2021-12-04T09:30:13+01:00
Bump changelogs

- - - - -
788837d6 by Dylan Aïssi at 2021-12-04T09:32:14+01:00
Refresh patches

- - - - -
c29e26cb by Andreas Tille at 2022-02-17T07:17:42+01:00
routine-update: New upstream version

- - - - -
c099c53f by Andreas Tille at 2022-02-17T07:17:42+01:00
New upstream version 2.00~a3-220129+dfsg
- - - - -
5125e12b by Andreas Tille at 2022-02-17T07:17:45+01:00
Update upstream source from tag 'upstream/2.00_a3-220129+dfsg'

Update to upstream version '2.00~a3-220129+dfsg'
with Debian dir e18f8b0edf36baa891d4d2c2505223e8dd8b8ca7
- - - - -
0ada54d3 by Andreas Tille at 2022-02-17T07:17:45+01:00
routine-update: Standards-Version: 4.6.0

- - - - -
c438efb2 by Andreas Tille at 2022-02-17T07:24:35+01:00
update patches

- - - - -
dd1538b3 by Andreas Tille at 2022-02-17T07:45:54+01:00
autopkgtest: /usr/bin/plink2: line 8:   156 Segmentation fault      "${cmd}" "$@"

- - - - -
4369d4ba by Andreas Tille at 2022-02-18T11:45:57+01:00
Add some debug code

- - - - -
8ee51a44 by Andreas Tille at 2022-02-18T12:14:33+01:00
Drop debug code

- - - - -
455de02d by Andreas Tille at 2022-02-18T12:15:15+01:00
Normalise name of autopkgtest script

- - - - -
f4d55d33 by Andreas Tille at 2022-02-18T12:16:59+01:00
Add some debug output

- - - - -
bf51ee93 by Andreas Tille at 2022-02-18T12:35:21+01:00
Fix check

- - - - -
f01ba65b by Andreas Tille at 2022-02-18T13:21:34+01:00
Attempt to track down SIGSEGV

- - - - -
3d93c55f by Andreas Tille at 2022-02-18T20:42:45+01:00
More debugging stuff

- - - - -
3b494d60 by Andreas Tille at 2022-02-19T11:40:29+01:00
routine-update: New upstream version

- - - - -
16f76ff3 by Andreas Tille at 2022-02-19T11:40:29+01:00
New upstream version 2.00~a3-220217+dfsg
- - - - -
3b299d59 by Andreas Tille at 2022-02-19T11:40:32+01:00
Update upstream source from tag 'upstream/2.00_a3-220217+dfsg'

Update to upstream version '2.00~a3-220217+dfsg'
with Debian dir c17cede28d372d829f359c3a1f1c7e7fdcacbd07
- - - - -
2653fec2 by Andreas Tille at 2022-02-19T11:49:51+01:00
Remove debugging patches

- - - - -
cedbb9ac by Andreas Tille at 2022-02-19T11:50:38+01:00
Upstream fixed segfault issues that occured when using gcc-11

- - - - -
ef757425 by Andreas Tille at 2022-02-19T12:17:48+01:00
Upstream claimed that bugs are closed and I did so in d/changelog.  Unfortunately autopkgtest keeps on segfaulting

- - - - -
5c4d7d84 by Andreas Tille at 2022-02-20T21:24:51+01:00
New upstream version 2.00~a3-220218+dfsg
- - - - -
d5d5dc17 by Andreas Tille at 2022-02-20T21:24:54+01:00
Update upstream source from tag 'upstream/2.00_a3-220218+dfsg'

Update to upstream version '2.00~a3-220218+dfsg'
with Debian dir 48a45c915f3580003848b491892ec6aac49ce461
- - - - -
60604564 by Andreas Tille at 2022-02-20T21:25:14+01:00
Upstream provided bug fix release

- - - - -
1cc95fe5 by Andreas Tille at 2022-02-20T21:46:09+01:00
Upload to unstable

- - - - -
773332cb by Andreas Tille at 2022-03-16T18:44:24+01:00
routine-update: New upstream version

- - - - -
22759a5d by Andreas Tille at 2022-03-16T18:44:24+01:00
New upstream version 2.00~a3-220316+dfsg
- - - - -
1eac93a9 by Andreas Tille at 2022-03-16T18:44:27+01:00
Update upstream source from tag 'upstream/2.00_a3-220316+dfsg'

Update to upstream version '2.00~a3-220316+dfsg'
with Debian dir ca612337e8036c5cdbd1e6502b5f395d6afcd152
- - - - -
7c05fc82 by Andreas Tille at 2022-03-16T18:54:44+01:00
routine-update: Ready to upload to unstable

- - - - -
1562e014 by Dylan Aïssi at 2022-07-29T16:35:47+02:00
Update d/watch for new versions

- - - - -
54c34de8 by Dylan Aïssi at 2022-07-29T16:36:00+02:00
New upstream version 2.00~a3.3-220603+dfsg
- - - - -
193a04aa by Dylan Aïssi at 2022-07-29T16:36:02+02:00
Update upstream source from tag 'upstream/2.00_a3.3-220603+dfsg'

Update to upstream version '2.00~a3.3-220603+dfsg'
with Debian dir dd901a97c863608feef33109e07b8092f7d52ad9
- - - - -
aa86e70d by Dylan Aïssi at 2022-07-29T16:37:35+02:00
Bump changelogs

- - - - -
9f871779 by Dylan Aïssi at 2022-07-29T16:40:07+02:00
Standards-Version: 4.6.1 (no changes needed)

- - - - -
54e190f2 by Dylan Aïssi at 2022-07-29T16:47:40+02:00
Release plink2 version 2.00~a3.3-220603+dfsg-1

- - - - -
c46ab027 by Andreas Tille at 2022-08-04T21:56:39+02:00
routine-update: New upstream version

- - - - -
31d780f7 by Andreas Tille at 2022-08-04T21:56:39+02:00
New upstream version 2.00~a3.3-220801+dfsg
- - - - -
196f388d by Andreas Tille at 2022-08-04T21:56:41+02:00
Update upstream source from tag 'upstream/2.00_a3.3-220801+dfsg'

Update to upstream version '2.00~a3.3-220801+dfsg'
with Debian dir 2ac4f6447fd1fa2d45bb769a3441248ced4f7122
- - - - -
ac0e53db by Andreas Tille at 2022-08-04T22:00:37+02:00
Refresh patches

- - - - -
81114c40 by Étienne Mollier at 2022-08-05T20:34:27+02:00
d/rules: build avx2 variant with -mfma, fixing build failure.

- - - - -
4aea933c by Étienne Mollier at 2022-08-05T22:14:08+02:00
d/b/simd-dispatch: fix launcher for avx2 variant and filter fma.

- - - - -
3966fd85 by Étienne Mollier at 2022-08-05T22:39:43+02:00
ready to upload to unstable.

- - - - -
0d168792 by Andreas Tille at 2022-12-12T09:23:45+01:00
See https://lists.debian.org/debian-med/2022/08/msg00025.html

- - - - -
02d8b737 by Andreas Tille at 2022-12-12T09:32:31+01:00
Fix watch file

- - - - -
358a17ba by Andreas Tille at 2022-12-12T09:33:29+01:00
New upstream version 2.00~a3.5-220809+dfsg
- - - - -
851217d2 by Andreas Tille at 2022-12-12T09:33:32+01:00
Update upstream source from tag 'upstream/2.00_a3.5-220809+dfsg'

Update to upstream version '2.00~a3.5-220809+dfsg'
with Debian dir 4a1a2ec178da65c6d8e00399937d3dcc8743cdfb
- - - - -
e1479acc by Andreas Tille at 2022-12-12T09:47:47+01:00
routine-update: Ready to upload to unstable

- - - - -
381cdcda by Michael R. Crusoe at 2023-01-22T18:42:52+01:00
Experimental rebuild with SIMDe 0.7.3~0git20230118123246.d1e75cd

- - - - -


30 changed files:

- LICENSE → COPYING
- + COPYING.LESSER
- Makefile
- Makefile.src
- + Python/LICENSE
- + Python/MANIFEST.in
- + Python/README.md
- − Python/ReadMe.md
- + Python/pyproject.toml
- Python/python_api.txt
- Python/setup.py
- Python/pgenlib.pyx → Python/src/pgenlib/pgenlib.pyx
- build_cuda/Makefile
- build_dynamic/Makefile
- build_win/Makefile
- + debian/README.test
- debian/bin/simd-dispatch
- debian/changelog
- debian/control
- + debian/docs
- debian/examples
- debian/patches/Fix_Makefile.patch
- + debian/patches/baseline
- − debian/patches/portable_m128i_setting
- debian/patches/series
- debian/patches/use_packaged_libdeflate.patch
- debian/rules
- debian/tests/control
- debian/tests/run-sample-analysis → debian/tests/run-unit-test
- debian/upstream.docs/upstream.changelog


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/plink2/-/compare/d108abe68ae88e372b8b912d48267ffe697d5946...381cdcda59d28f92f4b06d8638d132f6eb74141f

-- 
View it on GitLab: https://salsa.debian.org/med-team/plink2/-/compare/d108abe68ae88e372b8b912d48267ffe697d5946...381cdcda59d28f92f4b06d8638d132f6eb74141f
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20230122/9c7459ff/attachment-0001.htm>


More information about the debian-med-commit mailing list