[med-svn] [Git][med-team/hyphy][upstream] New upstream version 2.5.51+dfsg

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch upstream at Debian Med / hyphy


Commits:
36f9a9c3 by Étienne Mollier at 2023-07-09T13:15:47+02:00
New upstream version 2.5.51+dfsg
- - - - -


30 changed files:

- + .github/workflows/benchmark.yml
- + .github/workflows/codeql.yml
- + .github/workflows/coverage.yml
- + .github/workflows/stale.yml
- + .travis.yml
- CMakeLists.txt
- README.md
- res/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf
- res/TemplateBatchFiles/SelectionAnalyses/PRIME.bf
- res/TemplateBatchFiles/SelectionAnalyses/RELAX.bf
- res/TemplateBatchFiles/SelectionAnalyses/modules/io_functions.ibf
- res/TemplateBatchFiles/TemplateModels/defineGamma.mdl
- res/TemplateBatchFiles/libv3/models/codon/MG_REV_PROPERTIES.bf
- res/TemplateBatchFiles/libv3/tasks/estimators.bf
- src/core/batchlan.cpp
- src/core/batchlan2.cpp
- src/core/batchlanruntime.cpp
- src/core/dataset.cpp
- src/core/fisher_exact.cpp
- src/core/formula.cpp
- src/core/fstring.cpp
- src/core/global_things.cpp
- src/core/include/hy_strings.h
- src/core/include/likefunc.h
- src/core/include/mathobj.h
- src/core/include/polynoml.h
- src/core/include/site.h
- src/core/likefunc.cpp
- src/core/matrix.cpp
- src/core/parser2.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/commit/36f9a9c3a57c5f916df2f86d21c804f863593952

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View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/commit/36f9a9c3a57c5f916df2f86d21c804f863593952
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