[med-svn] [Git][med-team/augur][upstream] New upstream version 22.1.0

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch upstream at Debian Med / augur


Commits:
f72b0d9f by Étienne Mollier at 2023-07-18T16:38:07+02:00
New upstream version 22.1.0
- - - - -


30 changed files:

- .readthedocs.yml
- CHANGES.md
- augur/__version__.py
- augur/argparse_.py
- augur/curate/__init__.py
- + augur/curate/format_dates.py
- + augur/curate/format_dates_directives.py
- augur/dates/__init__.py
- augur/export_v1.py
- augur/export_v2.py
- augur/filter/_run.py
- augur/filter/include_exclude_rules.py
- augur/filter/subsample.py
- augur/frequencies.py
- augur/io/file.py
- augur/io/metadata.py
- augur/io/shell_command_runner.py
- augur/parse.py
- augur/refine.py
- augur/titer_model.py
- augur/traits.py
- augur/utils.py
- augur/validate.py
- docs/contribute/DEV_DOCS.md
- + docs/usage/cli/curate/format-dates.rst
- docs/usage/cli/curate/index.rst
- + mypy.ini
- setup.py
- + tests/functional/curate/cram/_setup.sh
- + tests/functional/curate/cram/format_dates.t


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/augur/-/commit/f72b0d9f681c1889b6ec1251c0229a39fbc568cb

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