[med-svn] [Git][med-team/igdiscover][master] 2 commits: Revert change of test results
Andreas Tille (@tille)
gitlab at salsa.debian.org
Wed Mar 15 06:50:16 GMT 2023
Andreas Tille pushed to branch master at Debian Med / igdiscover
Commits:
24fd9dfd by Andreas Tille at 2023-03-15T07:27:34+01:00
Revert change of test results
- - - - -
fad936b3 by Andreas Tille at 2023-03-15T07:49:34+01:00
Build-Depends igblast; re-activate test (just to show that it is broken)
- - - - -
3 changed files:
- debian/control
- debian/rules
- tests/results/assigned.tab
Changes:
=====================================
debian/control
=====================================
@@ -22,7 +22,7 @@ Build-Depends: debhelper-compat (= 13),
python3-versioneer,
python3-pytest <!nocheck>,
snakemake <!nocheck>,
-# not in distro ncbi-igblast <!nocheck>,
+ igblast <!nocheck>,
# python3-contextlib2,
# Documentation
python3-sphinx
=====================================
debian/rules
=====================================
@@ -25,8 +25,3 @@ override_dh_auto_clean:
rm -rf .pytest_cache debian/python3-igdiscover
rm -f src/igdiscover/__version__.py
#rm -rf src/igdiscover.egg-info/
-
-override_dh_auto_test:
-ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
- echo "**** NOT TESTING ******"
-endif
=====================================
tests/results/assigned.tab
=====================================
@@ -1,6 +1,6 @@
-count V_gene D_gene J_gene chain stop V_covered D_covered J_covered V_evalue D_evalue J_evalue FR1_SHM CDR1_SHM FR2_SHM CDR2_SHM FR3_SHM FR4_SHM V_SHM J_SHM V_aa_mut J_aa_mut FR1_aa_mut CDR1_aa_mut FR2_aa_mut CDR2_aa_mut FR3_aa_mut V_errors D_errors J_errors UTR leader CDR1_nt CDR1_aa CDR2_nt CDR2_aa CDR3_nt CDR3_aa V_nt V_aa V_end V_CDR3_start VD_junction D_region DJ_junction J_nt VDJ_nt VDJ_aa name barcode genomic_sequence
-1 IGHV3-15 IGHD3-3 IGHJ6*99 VH no 100.0 71.0 84.1 2.34E-133 2.13E-08 4.25E-16 1.3 0.0 0.0 0.0 1.8 8.8 1.0 11.3 2.0 25.0 0.0 0.0 0.0 0.0 5.3 3 0 6 GGATTCACTTTCAGTAACGCCTGG GFTFSNAW ATTAAAAGCAAAACTGATGGTGGGACAACA IKSKTDGGTT ACCACAGAGGGCGGGTACGATTTTTGGAGTGGTTATTTCTACTACGGTATGGACGTC TTEGGYDFWSGYFYYGMDV GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTCGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGATATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGGGGACACAGCCGTGTATTACTGTACCACAGA EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRYDSKNTLYLQMNSLKTGDTAVYYCTT* ACAGA 294 GGGCGGG TACGATTTTTGGAGTGGTTATT T CTACTACGGTATGGACGTCTGGGTCCAAGGGACCACGTTCACCGTCTCCTCAG GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTCGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGATATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGGGGACACAGCCGTGTATTACTGTACCACAGAGGGCGGGTACGATTTTTGGAGTGGTTATTTCTACTACGGTATGGACGTCTGGGTCCAAGGGACCACGTTCACCGTCTCCTCAG EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRYDSKNTLYLQMNSLKTGDTAVYYCTTEGGYDFWSGYFYYGMDVWVQGTTFTVSS* ERR1760498.1089966 AAAAACGTATTATTTGGTGGA GGGTTTTCCTTTTGGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTCGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGATATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGGGGACACAGCCGTGTATTACTGTACCACAGAGGGCGGGTACGATTTTTGGAGTGGTTATTTCTACTACGGTATGGACGTCTGGGTCCAAGGGACCACGTTCACCGTCTCCTCAGGGCGACCATCCGCCCCAACCCTTCTCCCCCCCGTTTCCTCTGAGAATTCCCCGTCGG
-1 IGHV3-48 IGHD4-17 IGHJ6*99 VH no 99.3 43.8 68.3 1.94E-117 9.6 5.08E-19 4.0 12.5 2.0 16.7 2.6 2.9 4.8 2.3 8.3 0.0 12.5 5.9 5.3 14 0 1 GGATTCACCTTCAGTAGCTATAAC GFTFSSYN ATTAGTAGTAGTAGTACCAGA ISSSSTR GCGAGACAGGGCAGCTACCGCTACGGTATGGACGTC ARQGSYRYGMDV GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTCAGTAGCTATAACATGAAGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTACCAGATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACGCACTGTATCTGCAAATGAACAGCCTGATAGCCGAGGACACGGCTGTGTATTACTGTGCGAGA EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYNMKWVRQAPGKGLEWVSYISSSSTRYYADSVKGRFTISRDNAKNALYLQMNSLIAEDTAVYYCAR CGAGA 285 CAGGGCAGCTACCG CTACGGT N/A ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAG GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTCAGTAGCTATAACATGAAGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTACCAGATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACGCACTGTATCTGCAAATGAACAGCCTGATAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACAGGGCAGCTACCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAG EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYNMKWVRQAPGKGLEWVSYISSSSTRYYADSVKGRFTISRDNAKNALYLQMNSLIAEDTAVYYCARQGSYRYGMDVWGQGTTVTVSS* ERR1760498.470638 AAAAACGTTGAAATGTGATGT GGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTCAGTAGCTATAACATGAAGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTACCAGATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACGCACTGTATCTGCAAATGAACAGCCTGATAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACAGGGCAGCTACCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGGGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGG
-1 IGHV1-18 IGHD3-10 IGHJ5*99 VH no 79.4 19.4 94.1 2.64E-45 29 5.19E-22 33.3 4.4 0.0 40.0 2.1 0.0 5.3 94 0 1 ACC T GCGCGCGGGGATCCGGCAGGGAGGAACTGGTTCGCCCCC ARGDPAGRNWFAP GGTGGGAGCAGCAACAGGTGCCCACTCCCAGATTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTATGCACAGAAGATTCAGGGCAGAGTCACCATGACCACAGACACATCCACGACCACAGCCTACATGGAGCTGAGGAGCCTCAGATCTGACGACACGGCCGTCTATTACTGTGCG GGSSNRCPLPDSAGAVWS*GEDAWGLSEGLLQGFWLHLYQLCTEDSGQSHHDHRHIHDHSLHGAEEPQI*RHGRLLLC* GTGCG 232 CG CGGGGA TCCGGCAGGGAGG AACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA GGTGGGAGCAGCAACAGGTGCCCACTCCCAGATTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTATGCACAGAAGATTCAGGGCAGAGTCACCATGACCACAGACACATCCACGACCACAGCCTACATGGAGCTGAGGAGCCTCAGATCTGACGACACGGCCGTCTATTACTGTGCGCGCGGGGATCCGGCAGGGAGGAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA GGSSNRCPLPDSAGAVWS*GEDAWGLSEGLLQGFWLHLYQLCTEDSGQSHHDHRHIHDHSLHGAEEPQI*RHGRLLLCARGSGREELVRPLGPGNPGHRLL* ERR1760498.639451 AAAAATGTAATAGTGTTTAAT GGTGGGAGCAGCAACAGGTGCCCACTCCCAGATTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTATGCACAGAAGATTCAGGGCAGAGTCACCATGACCACAGACACATCCACGACCACAGCCTACATGGAGCTGAGGAGCCTCAGATCTGACGACACGGCCGTCTATTACTGTGCGCGCGGGGATCCGGCAGGGAGGAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAAGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGG
-1 IGHV1-2 IGHJ5*99 VH no 99.0 90.2 1.86E-94 4.47E-12 1.3 33.3 11.8 20.8 15.8 17.6 13.7 13.0 20.8 25.0 0.0 50.0 17.6 37.5 26.3 40 6 GGATACACCTTCCTCAATCATGAT GYTFLNHD ATGAACTCAAACAGTGGTAACACA MNSNSGNT AGGAGCGGCAGGGGCCAAGACGGGCGGGAATGGTTCGACCCC RSGRGQDGREWFDP CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGTGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCCTCAATCATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGACTTGAATGGATGGGATGGATGAACTCAAACAGTGGTAACACAGGCTATGCACAGATGTTCCAGGGCAGAGTCACCATGACCCGGGACACCTCCATCGACACAGCCGACTTGGAACTGAGCAGCCTGAGATATGACGACACGGCCGGGTATTTTTGTAGGAG QVQLVQSGAEVKKPGASVKVSCKASGYTFLNHDITWVRQATGQGLEWMGWMNSNSGNTGYAQMFQGRVTMTRDTSIDTADLELSSLRYDDTAGYFCR* AGGAG 288 N/A N/A CGGCAGGGGCCAAGACGGGCGGGAA TGGTTCGACCCCTGGGGCCAGGGAACCGCGGTTATCGTTTCCGCAG CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGTGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCCTCAATCATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGACTTGAATGGATGGGATGGATGAACTCAAACAGTGGTAACACAGGCTATGCACAGATGTTCCAGGGCAGAGTCACCATGACCCGGGACACCTCCATCGACACAGCCGACTTGGAACTGAGCAGCCTGAGATATGACGACACGGCCGGGTATTTTTGTAGGAGCGGCAGGGGCCAAGACGGGCGGGAATGGTTCGACCCCTGGGGCCAGGGAACCGCGGTTATCGTTTCCGCAG QVQLVQSGAEVKKPGASVKVSCKASGYTFLNHDITWVRQATGQGLEWMGWMNSNSGNTGYAQMFQGRVTMTRDTSIDTADLELSSLRYDDTAGYFCRSGRGQDGREWFDPWGQGTAVIVSA* ERR1760498.323296 AAAAAGGTGGGGTTGTTAAAG GGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGTGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCCTCAATCATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGACTTGAATGGATGGGATGGATGAACTCAAACAGTGGTAACACAGGCTATGCACAGATGTTCCAGGGCAGAGTCACCATGACCCGGGACACCTCCATCGACACAGCCGACTTGGAACTGAGCAGCCTGAGATATGACGACACGGCCGGGTATTTTTGTAGGAGCGGCAGGGGCCAAGACGGGCGGGAATGGTTCGACCCCTGGGGCCAGGGAACCGCGGTTATCGTTTCCGCAGGGAGTGCATCCGCCCCAACCCTGTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGG
-1 GQ123456 IGHD1-7 IGHJ5*99 VH no 99.0 64.7 68.6 3.77E-114 0.047 2.2E-14 1.3 4.2 20.6 4.2 5.3 3.0 7.5 2.9 9.1 4.0 12.5 12.5 15.8 23 0 1 GGATTCACCTTTAGCAGCTATGAC GFTFSSYD ATTAGTGGTAGTAGTGGTAGCACA ISGSSGST GTGAATGCTAACTGGAACTTCCGCTCC VNANWNFRS GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTATTAGTGGTAGTAGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAGGAGCACGCTGTATCTGCAAATGGACAGCCTGAGAACCGAGGACACGGCCGTATATCACTGTGTGAA EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSAISGSISGSSGSTHYADSVKGRFTISRDNSRSTLYLQMDSLRTEDTAVYHCV* GTGAA 300 TGC TAACTGGAACT TCCGCT CCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCA GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTATTAGTGGTAGTAGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAGGAGCACGCTGTATCTGCAAATGGACAGCCTGAGAACCGAGGACACGGCCGTATATCACTGTGTGAATGCTAACTGGAACTTCCGCTCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCA EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSAISGSISGSSGSTHYADSVKGRFTISRDNSRSTLYLQMDSLRTEDTAVYHCVNANWNFRSWGQGTQVTVSS ERR1760498.1230100 AAAGTTGTGGTGGTGTTGAGG GGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTATTAGTGGTAGTAGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAGGAGCACGCTGTATCTGCAAATGGACAGCCTGAGAACCGAGGACACGGCCGTATATCACTGTGTGAATGCTAACTGGAACTTCCGCTCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCACGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGG
+count V_gene D_gene J_gene chain stop V_covered D_covered J_covered V_evalue D_evalue J_evalue FR1_SHM CDR1_SHM FR2_SHM CDR2_SHM FR3_SHM FR4_SHM V_SHM J_SHM V_aa_mut J_aa_mut FR1_aa_mut CDR1_aa_mut FR2_aa_mut CDR2_aa_mut FR3_aa_mut V_errors D_errors J_errors UTR leader CDR1_nt CDR1_aa CDR2_nt CDR2_aa CDR3_nt CDR3_aa V_nt V_aa V_end V_CDR3_start VD_junction D_region DJ_junction J_nt VDJ_nt VDJ_aa name barcode genomic_sequence
+1 IGHV3-15 IGHD3-3 IGHJ6*99 VH no 100.0 71.0 84.1 2.34E-133 2.13E-08 4.25E-16 1.3 0.0 0.0 0.0 1.8 8.8 1.0 11.3 2.0 25.0 0.0 0.0 0.0 0.0 5.3 3 0 6 GGATTCACTTTCAGTAACGCCTGG GFTFSNAW ATTAAAAGCAAAACTGATGGTGGGACAACA IKSKTDGGTT ACCACAGAGGGCGGGTACGATTTTTGGAGTGGTTATTTCTACTACGGTATGGACGTC TTEGGYDFWSGYFYYGMDV GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTCGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGATATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGGGGACACAGCCGTGTATTACTGTACCACAGA EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRYDSKNTLYLQMNSLKTGDTAVYYCTT* ACAGA 294 GGGCGGG TACGATTTTTGGAGTGGTTATT T CTACTACGGTATGGACGTCTGGGTCCAAGGGACCACGTTCACCGTCTCCTCAG GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTCGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGATATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGGGGACACAGCCGTGTATTACTGTACCACAGAGGGCGGGTACGATTTTTGGAGTGGTTATTTCTACTACGGTATGGACGTCTGGGTCCAAGGGACCACGTTCACCGTCTCCTCAG EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRYDSKNTLYLQMNSLKTGDTAVYYCTTEGGYDFWSGYFYYGMDVWVQGTTFTVSS* ERR1760498.1089966 AAAAACGTATTATTTGGTGGA GGGTTTTCCTTTTGGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTCGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGATATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGGGGACACAGCCGTGTATTACTGTACCACAGAGGGCGGGTACGATTTTTGGAGTGGTTATTTCTACTACGGTATGGACGTCTGGGTCCAAGGGACCACGTTCACCGTCTCCTCAGGGCGACCATCCGCCCCAACCCTTCTCCCCCCCGTTTCCTCTGAGAATTCCCCGTCGG
+1 IGHV3-48 IGHD4-17 IGHJ6*99 VH no 99.3 43.8 68.3 1.94E-117 9.6 5.08E-19 4.0 12.5 2.0 16.7 2.6 2.9 4.8 2.3 8.3 0.0 12.5 5.9 5.3 14 0 1 GGATTCACCTTCAGTAGCTATAAC GFTFSSYN ATTAGTAGTAGTAGTACCAGA ISSSSTR GCGAGACAGGGCAGCTACCGCTACGGTATGGACGTC ARQGSYRYGMDV GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTCAGTAGCTATAACATGAAGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTACCAGATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACGCACTGTATCTGCAAATGAACAGCCTGATAGCCGAGGACACGGCTGTGTATTACTGTGCGAGA EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYNMKWVRQAPGKGLEWVSYISSSSTRYYADSVKGRFTISRDNAKNALYLQMNSLIAEDTAVYYCAR CGAGA 285 CAGGGCAGCTACCG CTACGGT N/A ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAG GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTCAGTAGCTATAACATGAAGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTACCAGATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACGCACTGTATCTGCAAATGAACAGCCTGATAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACAGGGCAGCTACCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAG EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYNMKWVRQAPGKGLEWVSYISSSSTRYYADSVKGRFTISRDNAKNALYLQMNSLIAEDTAVYYCARQGSYRYGMDVWGQGTTVTVSS* ERR1760498.470638 AAAAACGTTGAAATGTGATGT GGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTCAGTAGCTATAACATGAAGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTACCAGATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACGCACTGTATCTGCAAATGAACAGCCTGATAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACAGGGCAGCTACCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGGGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGG
+1 IGHV1-18 IGHD3-10 IGHJ5*99 VH no 79.4 19.4 94.1 2.64E-45 29 5.19E-22 33.3 4.4 0.0 40.0 2.1 0.0 5.3 94 0 1 ACC T GCGCGCGGGGATCCGGCAGGGAGGAACTGGTTCGCCCCC ARGDPAGRNWFAP GGTGGGAGCAGCAACAGGTGCCCACTCCCAGATTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTATGCACAGAAGATTCAGGGCAGAGTCACCATGACCACAGACACATCCACGACCACAGCCTACATGGAGCTGAGGAGCCTCAGATCTGACGACACGGCCGTCTATTACTGTGCG GGSSNRCPLPDSAGAVWS*GEDAWGLSEGLLQGFWLHLYQLCTEDSGQSHHDHRHIHDHSLHGAEEPQI*RHGRLLLC* GTGCG 232 CG CGGGGA TCCGGCAGGGAGG AACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA GGTGGGAGCAGCAACAGGTGCCCACTCCCAGATTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTATGCACAGAAGATTCAGGGCAGAGTCACCATGACCACAGACACATCCACGACCACAGCCTACATGGAGCTGAGGAGCCTCAGATCTGACGACACGGCCGTCTATTACTGTGCGCGCGGGGATCCGGCAGGGAGGAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA GGSSNRCPLPDSAGAVWS*GEDAWGLSEGLLQGFWLHLYQLCTEDSGQSHHDHRHIHDHSLHGAEEPQI*RHGRLLLCARGSGREELVRPLGPGNPGHRLL* ERR1760498.639451 AAAAATGTAATAGTGTTTAAT GGTGGGAGCAGCAACAGGTGCCCACTCCCAGATTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTATGCACAGAAGATTCAGGGCAGAGTCACCATGACCACAGACACATCCACGACCACAGCCTACATGGAGCTGAGGAGCCTCAGATCTGACGACACGGCCGTCTATTACTGTGCGCGCGGGGATCCGGCAGGGAGGAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAAGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGG
+1 IGHV1-2 IGHJ5*99 VH no 99.0 90.2 1.86E-94 4.47E-12 1.3 33.3 11.8 20.8 15.8 17.6 13.7 13.0 20.8 25.0 0.0 50.0 17.6 37.5 26.3 40 6 GGATACACCTTCCTCAATCATGAT GYTFLNHD ATGAACTCAAACAGTGGTAACACA MNSNSGNT AGGAGCGGCAGGGGCCAAGACGGGCGGGAATGGTTCGACCCC RSGRGQDGREWFDP CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGTGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCCTCAATCATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGACTTGAATGGATGGGATGGATGAACTCAAACAGTGGTAACACAGGCTATGCACAGATGTTCCAGGGCAGAGTCACCATGACCCGGGACACCTCCATCGACACAGCCGACTTGGAACTGAGCAGCCTGAGATATGACGACACGGCCGGGTATTTTTGTAGGAG QVQLVQSGAEVKKPGASVKVSCKASGYTFLNHDITWVRQATGQGLEWMGWMNSNSGNTGYAQMFQGRVTMTRDTSIDTADLELSSLRYDDTAGYFCR* AGGAG 288 N/A N/A CGGCAGGGGCCAAGACGGGCGGGAA TGGTTCGACCCCTGGGGCCAGGGAACCGCGGTTATCGTTTCCGCAG CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGTGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCCTCAATCATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGACTTGAATGGATGGGATGGATGAACTCAAACAGTGGTAACACAGGCTATGCACAGATGTTCCAGGGCAGAGTCACCATGACCCGGGACACCTCCATCGACACAGCCGACTTGGAACTGAGCAGCCTGAGATATGACGACACGGCCGGGTATTTTTGTAGGAGCGGCAGGGGCCAAGACGGGCGGGAATGGTTCGACCCCTGGGGCCAGGGAACCGCGGTTATCGTTTCCGCAG QVQLVQSGAEVKKPGASVKVSCKASGYTFLNHDITWVRQATGQGLEWMGWMNSNSGNTGYAQMFQGRVTMTRDTSIDTADLELSSLRYDDTAGYFCRSGRGQDGREWFDPWGQGTAVIVSA* ERR1760498.323296 AAAAAGGTGGGGTTGTTAAAG GGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGTGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCCTCAATCATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGACTTGAATGGATGGGATGGATGAACTCAAACAGTGGTAACACAGGCTATGCACAGATGTTCCAGGGCAGAGTCACCATGACCCGGGACACCTCCATCGACACAGCCGACTTGGAACTGAGCAGCCTGAGATATGACGACACGGCCGGGTATTTTTGTAGGAGCGGCAGGGGCCAAGACGGGCGGGAATGGTTCGACCCCTGGGGCCAGGGAACCGCGGTTATCGTTTCCGCAGGGAGTGCATCCGCCCCAACCCTGTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGG
+1 GQ123456 IGHD1-7 IGHJ5*99 VH no 99.0 64.7 68.6 3.77E-114 0.047 2.2E-14 1.3 4.2 20.6 4.2 5.3 3.0 7.5 2.9 9.1 4.0 12.5 12.5 15.8 23 0 1 GGATTCACCTTTAGCAGCTATGAC GFTFSSYD ATTAGTGGTAGTAGTGGTAGCACA ISGSSGST GTGAATGCTAACTGGAACTTCCGCTCC VNANWNFRS GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTATTAGTGGTAGTAGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAGGAGCACGCTGTATCTGCAAATGGACAGCCTGAGAACCGAGGACACGGCCGTATATCACTGTGTGAA EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSAISGSISGSSGSTHYADSVKGRFTISRDNSRSTLYLQMDSLRTEDTAVYHCV* GTGAA 300 TGC TAACTGGAACT TCCGCT CCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCA GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTATTAGTGGTAGTAGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAGGAGCACGCTGTATCTGCAAATGGACAGCCTGAGAACCGAGGACACGGCCGTATATCACTGTGTGAATGCTAACTGGAACTTCCGCTCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCA EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSAISGSISGSSGSTHYADSVKGRFTISRDNSRSTLYLQMDSLRTEDTAVYHCVNANWNFRSWGQGTQVTVSS ERR1760498.1230100 AAAGTTGTGGTGGTGTTGAGG GGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTATTAGTGGTAGTAGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAGGAGCACGCTGTATCTGCAAATGGACAGCCTGAGAACCGAGGACACGGCCGTATATCACTGTGTGAATGCTAACTGGAACTTCCGCTCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCACGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGG
View it on GitLab: https://salsa.debian.org/med-team/igdiscover/-/compare/c562def17d7ba73f056e90a3027fc10a54efc415...fad936b3bd6168fff918564ac22ce7b0bfed9111
--
View it on GitLab: https://salsa.debian.org/med-team/igdiscover/-/compare/c562def17d7ba73f056e90a3027fc10a54efc415...fad936b3bd6168fff918564ac22ce7b0bfed9111
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