[med-svn] [Git][med-team/hyphy][upstream] New upstream version 2.5.50+dfsg

[Nilesh Patra (@nilesh)]

Nilesh Patra pushed to branch upstream at Debian Med / hyphy


Commits:
897900f6 by Nilesh Patra at 2023-05-09T22:19:19+05:30
New upstream version 2.5.50+dfsg
- - - - -


30 changed files:

- − .github/workflows/benchmark.yml
- − .github/workflows/codeql.yml
- − .github/workflows/coverage.yml
- − .github/workflows/stale.yml
- − .travis.yml
- CMakeLists.txt
- res/TemplateBatchFiles/MSS-selector-2.bf
- res/TemplateBatchFiles/MSS-selector.bf
- res/TemplateBatchFiles/SelectionAnalyses/PRIME.bf
- res/TemplateBatchFiles/SelectionAnalyses/modules/shared-load-file.bf
- res/TemplateBatchFiles/libv3/IOFunctions.bf
- res/TemplateBatchFiles/libv3/UtilityFunctions.bf
- res/TemplateBatchFiles/libv3/all-terms.bf
- res/TemplateBatchFiles/libv3/models/parameters.bf
- res/TemplateBatchFiles/libv3/models/rate_variation.bf
- res/TemplateBatchFiles/libv3/tasks/alignments.bf
- res/TemplateBatchFiles/libv3/tasks/estimators.bf
- res/TemplateBatchFiles/libv3/tasks/trees.bf
- src/core/associative_list.cpp
- src/core/avllistx.cpp
- src/core/batchlan.cpp
- src/core/batchlanruntime.cpp
- src/core/calcnode.cpp
- src/core/category.cpp
- src/core/dataset.cpp
- src/core/global_things.cpp
- src/core/hbl_env.cpp
- src/core/include/avllistx.h
- src/core/include/calcnode.h
- src/core/include/fstring.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/commit/897900f694604127dcdd7ce17bb444caf1a4c994

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View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/commit/897900f694604127dcdd7ce17bb444caf1a4c994
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